| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114797539
Identifier: 114797539
GI number: 114797539
Start: 468956
End: 470011
Strand: Reverse
Name: 114797539
Synonym: HNE_0476
Alternate gene names: NA
Gene position: 470011-468956 (Counterclockwise)
Preceding gene: 114798469
Following gene: 114798080
Centisome position: 12.69
GC content: 67.71
Gene sequence:
>1056_bases ATGGATCTCCTGAAGCGCCTCGACCTCTCGATCCCGATCATCCAGGCCCCGATGGCAGGCGTTTCCACGCCACAGCTCGC CGCCGCCATTTCCAATGCAGGCGGCCTCGGCTCAATCGCCGTGGGGGCAACAGACGCGCCGGGCGCGCGAACACTGATCG ACGCCACAGCCGCGCTCACGCGCCGCCCCTTCAATGTGAATGTATTCGTCCATGAGGACCCGGCGCGCGATGCGCAACGT GAAGCCGAATGGCTGGCGGCCCTGCGCCCCCTTTTCCGTGAGTTTGGCGCAGAGCCGCCAGAGCGGCTGGAAACGATTTA CAGGAGCTTTGCAAATGACGACGCCATGCTCGCCCTGCTCGTCGAAAAAGCGCCGCGTGTTGTCAGTTTTCATTTCGGGC TTCCCGATGCCGGCCGGATCAAGGCCCTGAAGGAGGCCGGCTGCGTCTTGCTGTCCACCGCCACCAATCTTGCAGAAGCC CGCGCGGCAGAAGCCGCCGGCGTCGATGCCATTGTCGCGCAGGGCTATGAAGCAGGCGGCCATCGCGGTGTCTTCGATCC CGGCGTGCCCGATGACCAGATCGGTACTCTGGCGCTTACCCGACTGTTGGTGGCGCGCTGCGCGCTGCCGGTCATCGCCG CTGGCGGCATCATGGACGGCGCCGGAGTACGGGCTGCCCTGGATCTGGGCGCCGTCGCCGCCCAGCTCGGCACAGCCTTT ATCGCCTGCCCGGAAAGCAGCGCCGATGCAGCCTTCCGGCAAGCGCTCAAAAGTCCGGGGGCGGACCACACGGTCGTCAC CACCGCGATCTCCGGCCGCCCGGCCCGCTGCCTCGCCAACCGGTTCACCGCCTGGGGCGCTGAGGCCTCCGCCCCTCGCC CGGCCTATCCCGCCGCCTATGACGCGGGCAAAGCGCTGAACGCCGCAGCCAAGGCCAAAGGTGAAACCGGCTACGGCGCC CAATGGGCTGGCCAGGGCGCGCCCCTTCACCGGGCGCTCCCCGCCGCAGACCTTCTGGCGCAGATCGCAGATGAAATGAC GCGGGTTGGCCCCTAA
Upstream 100 bases:
>100_bases AGGCCAGGTCATCAGCACACTGCAAGGCTGGCTCGGCAAGGCCCTGACGCCTTGAGCTGACCTCACCTGACCTGCCCTGC CCCAGAAAGCCGCCTTCACC
Downstream 100 bases:
>100_bases ATCCGCGGCGGCCGGACCAGCGTGTCCTTCAGGTCGGCAATCTCTGCCTCGGTCGTGGCCCAGGAGCAGACAAACCGGCT CGATCCGCCCGGCCAGTCGG
Product: 2-nitropropane dioxygenase family oxidoreductase
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MDLLKRLDLSIPIIQAPMAGVSTPQLAAAISNAGGLGSIAVGATDAPGARTLIDATAALTRRPFNVNVFVHEDPARDAQR EAEWLAALRPLFREFGAEPPERLETIYRSFANDDAMLALLVEKAPRVVSFHFGLPDAGRIKALKEAGCVLLSTATNLAEA RAAEAAGVDAIVAQGYEAGGHRGVFDPGVPDDQIGTLALTRLLVARCALPVIAAGGIMDGAGVRAALDLGAVAAQLGTAF IACPESSADAAFRQALKSPGADHTVVTTAISGRPARCLANRFTAWGAEASAPRPAYPAAYDAGKALNAAAKAKGETGYGA QWAGQGAPLHRALPAADLLAQIADEMTRVGP
Sequences:
>Translated_351_residues MDLLKRLDLSIPIIQAPMAGVSTPQLAAAISNAGGLGSIAVGATDAPGARTLIDATAALTRRPFNVNVFVHEDPARDAQR EAEWLAALRPLFREFGAEPPERLETIYRSFANDDAMLALLVEKAPRVVSFHFGLPDAGRIKALKEAGCVLLSTATNLAEA RAAEAAGVDAIVAQGYEAGGHRGVFDPGVPDDQIGTLALTRLLVARCALPVIAAGGIMDGAGVRAALDLGAVAAQLGTAF IACPESSADAAFRQALKSPGADHTVVTTAISGRPARCLANRFTAWGAEASAPRPAYPAAYDAGKALNAAAKAKGETGYGA QWAGQGAPLHRALPAADLLAQIADEMTRVGP >Mature_351_residues MDLLKRLDLSIPIIQAPMAGVSTPQLAAAISNAGGLGSIAVGATDAPGARTLIDATAALTRRPFNVNVFVHEDPARDAQR EAEWLAALRPLFREFGAEPPERLETIYRSFANDDAMLALLVEKAPRVVSFHFGLPDAGRIKALKEAGCVLLSTATNLAEA RAAEAAGVDAIVAQGYEAGGHRGVFDPGVPDDQIGTLALTRLLVARCALPVIAAGGIMDGAGVRAALDLGAVAAQLGTAF IACPESSADAAFRQALKSPGADHTVVTTAISGRPARCLANRFTAWGAEASAPRPAYPAAYDAGKALNAAAKAKGETGYGA QWAGQGAPLHRALPAADLLAQIADEMTRVGP
Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322609, Length=318, Percent_Identity=32.3899371069182, Blast_Score=136, Evalue=4e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 36052; Mature: 36052
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLLKRLDLSIPIIQAPMAGVSTPQLAAAISNAGGLGSIAVGATDAPGARTLIDATAALT CCHHHHHCCCCCCHHCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHH RRPFNVNVFVHEDPARDAQREAEWLAALRPLFREFGAEPPERLETIYRSFANDDAMLALL CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHH VEKAPRVVSFHFGLPDAGRIKALKEAGCVLLSTATNLAEARAAEAAGVDAIVAQGYEAGG HHHCCCEEEEECCCCCCHHHHHHHHCCEEEEECHHHHHHHHHHHHCCHHHHHHCCCCCCC HRGVFDPGVPDDQIGTLALTRLLVARCALPVIAAGGIMDGAGVRAALDLGAVAAQLGTAF CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCEE IACPESSADAAFRQALKSPGADHTVVTTAISGRPARCLANRFTAWGAEASAPRPAYPAAY EECCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCHH DAGKALNAAAKAKGETGYGAQWAGQGAPLHRALPAADLLAQIADEMTRVGP CCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDLLKRLDLSIPIIQAPMAGVSTPQLAAAISNAGGLGSIAVGATDAPGARTLIDATAALT CCHHHHHCCCCCCHHCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHH RRPFNVNVFVHEDPARDAQREAEWLAALRPLFREFGAEPPERLETIYRSFANDDAMLALL CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHH VEKAPRVVSFHFGLPDAGRIKALKEAGCVLLSTATNLAEARAAEAAGVDAIVAQGYEAGG HHHCCCEEEEECCCCCCHHHHHHHHCCEEEEECHHHHHHHHHHHHCCHHHHHHCCCCCCC HRGVFDPGVPDDQIGTLALTRLLVARCALPVIAAGGIMDGAGVRAALDLGAVAAQLGTAF CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCEE IACPESSADAAFRQALKSPGADHTVVTTAISGRPARCLANRFTAWGAEASAPRPAYPAAY EECCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCHH DAGKALNAAAKAKGETGYGAQWAGQGAPLHRALPAADLLAQIADEMTRVGP CCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA