| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114797518
Identifier: 114797518
GI number: 114797518
Start: 2742745
End: 2744256
Strand: Reverse
Name: 114797518
Synonym: HNE_2587
Alternate gene names: NA
Gene position: 2744256-2742745 (Counterclockwise)
Preceding gene: 114800108
Following gene: 114799569
Centisome position: 74.07
GC content: 60.91
Gene sequence:
>1512_bases ATGCGTATGATGTCTCGAATCTGCACCCGTCTGCCCGCCGCCGCGATGGCCACCTTGATTGCAGCCTGCGCCTCTTCGGC AGAGCCTGCAGCGCCTGTCTGGACAGTATTTGCCGATGGGCCAGCGCAGAGCGTGCAGGACCGCTTTGGCGAGGCGCCGC TCGCCTATTCGGTTGCCTGGAGCGAGTTGAAACTTGATCCGGAGCAGGGAGAAACAAGCGCGACCATTTCCGGAACGGCC TATCTGGTTGCCTGCGACTGTGACCGGACAGAGCGGCCCGTGATGTTCCTGTTCAATGGGGGGCCGGGCGCTTCGTCATC TCCCTTGCATTTTTCCATGGGGCCCAAGGCGCGCGGAAAAGAGGGCGAGTTTCCAGATAATCCGTACACCGTTCTAAGGG CCGCAGATCTCGTCTTCATCGATCCGGTGGACACCGGCTTCAGCCGGACCCATTCCGAGGACGGGAAGGCGCGCTACCTT GGTGTTGAAGGAGATGTCGACGCCGTAAATCGATACATCCGCGCCTGGCTCGACGGGAACGGCCGCCGCGCGGCGCCCGT TCTTCTGGCGGGGCAGAGCTATGGCGGGACCCGGCTTTCCAATCTCGTCGCCGAGGTAGACGATCTGGATGTGCGCGGCC TGGTGATGGTGTCGCCGGCGCTTGATAGCGGGGCGGGCCAGACCGATCTGGGGCATGTGTTCGCGCTGCCGACAATGGCG GCCACCGCATGGCGATTTGGCCGGTCGGGAATTGAGGCTGAGAGTGAGGCAGAGGCCTGGGACATCGCAAGGGAATATGC CGAGACCGGATATCTGCTGGCGTTGCAACAGGGTGACCTTATCGCGCCAGAAGAGAAGGCTGCGGTTGCCGCAGACATAG CGTCGATGACGGGGCTTTCGGCCGGGGATGTGCTTGGCGCCGATCTGCGCGTTGATATCCAGTTCTTTCTGGAGAATGTG CTTTCGACTGACGGCCTGCTCGTCAGCCGGCTGAATACCGGCGTGACTTCTCCGCTGCCTTCACCGGACGTCAATTCGCA CCGGCCCGCCGCCGCAAACGACCCATCGTTGGGTCTTGGTCGGTCGAACATCATTCTGTCGTCAGAGATCGCGAAATATC TTTCAGAGGTTACCGGCGTTCAGAGAGGCGAGGCGTATCGCTCTCTCAATCTGGATGCCAACTTTGCTTGGGACTGGCGG TCCTCGGCGAAATCGCCGAACTTCTATGTCAGCGCGGCGCCCGTCCTCTCGCAGTTCATGCAGGAGAAAGAGCGCGTCCG GCTGCTCGTATTCGCCGGTTATCGCGACCTCGCGACGACGCTGCTCGGAACACGCTATGCGTTGACCCACAATGATCTGC CCCAGGACCGGGTAACGCTCGCCGCGTTGCCGGGTGGCCATTCGCCTTATGATGAGGAAACGCTGAAAGCGGGTATGGCG GATCAACTTTTTGCCTTCATTCAATCTGCCGCAATGACGGCATCTTCAAATGCTCAGGAGTCTGCAGAATGA
Upstream 100 bases:
>100_bases ATGCATTCCTCGGCGCGATTATGCATGAATGTGCCCGTTGGGGTGTATCGGCGCAGCCTATAGGCATAGGATTTTTCCGG TACAGGGGCGAGTTTAAAGG
Downstream 100 bases:
>100_bases CCTTTCGCGCTTTTGCAACATGCGCTGCTGCCTTGTTCATTTCCGCCTTTCCGGCGGCCTCTGGTCAAGGCGCTGAATAT GAGTATGCCATCATCCAGAA
Product: serine carboxypeptidase family protein
Products: NA
Alternate protein names: Serine Carboxypeptidase Family Protein; Carboxypeptidase-Related Protein; Serine Carboxypeptidase; Carboxypeptidase C; S10 Family Peptidase; Serine-Type Carboxypeptidase Family Protein; Carboxypeptidase; S10 Family Carboxypeptidase; Carboxypeptidase-Like Protein; Serine Carboxypeptidase Superfamily; Peptidase S
Number of amino acids: Translated: 503; Mature: 503
Protein sequence:
>503_residues MRMMSRICTRLPAAAMATLIAACASSAEPAAPVWTVFADGPAQSVQDRFGEAPLAYSVAWSELKLDPEQGETSATISGTA YLVACDCDRTERPVMFLFNGGPGASSSPLHFSMGPKARGKEGEFPDNPYTVLRAADLVFIDPVDTGFSRTHSEDGKARYL GVEGDVDAVNRYIRAWLDGNGRRAAPVLLAGQSYGGTRLSNLVAEVDDLDVRGLVMVSPALDSGAGQTDLGHVFALPTMA ATAWRFGRSGIEAESEAEAWDIAREYAETGYLLALQQGDLIAPEEKAAVAADIASMTGLSAGDVLGADLRVDIQFFLENV LSTDGLLVSRLNTGVTSPLPSPDVNSHRPAAANDPSLGLGRSNIILSSEIAKYLSEVTGVQRGEAYRSLNLDANFAWDWR SSAKSPNFYVSAAPVLSQFMQEKERVRLLVFAGYRDLATTLLGTRYALTHNDLPQDRVTLAALPGGHSPYDEETLKAGMA DQLFAFIQSAAMTASSNAQESAE
Sequences:
>Translated_503_residues MRMMSRICTRLPAAAMATLIAACASSAEPAAPVWTVFADGPAQSVQDRFGEAPLAYSVAWSELKLDPEQGETSATISGTA YLVACDCDRTERPVMFLFNGGPGASSSPLHFSMGPKARGKEGEFPDNPYTVLRAADLVFIDPVDTGFSRTHSEDGKARYL GVEGDVDAVNRYIRAWLDGNGRRAAPVLLAGQSYGGTRLSNLVAEVDDLDVRGLVMVSPALDSGAGQTDLGHVFALPTMA ATAWRFGRSGIEAESEAEAWDIAREYAETGYLLALQQGDLIAPEEKAAVAADIASMTGLSAGDVLGADLRVDIQFFLENV LSTDGLLVSRLNTGVTSPLPSPDVNSHRPAAANDPSLGLGRSNIILSSEIAKYLSEVTGVQRGEAYRSLNLDANFAWDWR SSAKSPNFYVSAAPVLSQFMQEKERVRLLVFAGYRDLATTLLGTRYALTHNDLPQDRVTLAALPGGHSPYDEETLKAGMA DQLFAFIQSAAMTASSNAQESAE >Mature_503_residues MRMMSRICTRLPAAAMATLIAACASSAEPAAPVWTVFADGPAQSVQDRFGEAPLAYSVAWSELKLDPEQGETSATISGTA YLVACDCDRTERPVMFLFNGGPGASSSPLHFSMGPKARGKEGEFPDNPYTVLRAADLVFIDPVDTGFSRTHSEDGKARYL GVEGDVDAVNRYIRAWLDGNGRRAAPVLLAGQSYGGTRLSNLVAEVDDLDVRGLVMVSPALDSGAGQTDLGHVFALPTMA ATAWRFGRSGIEAESEAEAWDIAREYAETGYLLALQQGDLIAPEEKAAVAADIASMTGLSAGDVLGADLRVDIQFFLENV LSTDGLLVSRLNTGVTSPLPSPDVNSHRPAAANDPSLGLGRSNIILSSEIAKYLSEVTGVQRGEAYRSLNLDANFAWDWR SSAKSPNFYVSAAPVLSQFMQEKERVRLLVFAGYRDLATTLLGTRYALTHNDLPQDRVTLAALPGGHSPYDEETLKAGMA DQLFAFIQSAAMTASSNAQESAE
Specific function: Unknown
COG id: COG2939
COG function: function code E; Carboxypeptidase C (cathepsin A)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53645; Mature: 53645
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMMSRICTRLPAAAMATLIAACASSAEPAAPVWTVFADGPAQSVQDRFGEAPLAYSVAW CCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHCCCCEEEEEEH SELKLDPEQGETSATISGTAYLVACDCDRTERPVMFLFNGGPGASSSPLHFSMGPKARGK HHEEECCCCCCCCEEECCEEEEEEECCCCCCCCEEEEECCCCCCCCCCEEEECCCCCCCC EGEFPDNPYTVLRAADLVFIDPVDTGFSRTHSEDGKARYLGVEGDVDAVNRYIRAWLDGN CCCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCC GRRAAPVLLAGQSYGGTRLSNLVAEVDDLDVRGLVMVSPALDSGAGQTDLGHVFALPTMA CCEECEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCEEEHHHHH ATAWRFGRSGIEAESEAEAWDIAREYAETGYLLALQQGDLIAPEEKAAVAADIASMTGLS HHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCC AGDVLGADLRVDIQFFLENVLSTDGLLVSRLNTGVTSPLPSPDVNSHRPAAANDPSLGLG CCCEECCCCEEHHHHHHHHHHCCCCEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RSNIILSSEIAKYLSEVTGVQRGEAYRSLNLDANFAWDWRSSAKSPNFYVSAAPVLSQFM CCCEEEHHHHHHHHHHHHCCCCCCHHEEECCCCCEEECHHCCCCCCCEEEEHHHHHHHHH QEKERVRLLVFAGYRDLATTLLGTRYALTHNDLPQDRVTLAALPGGHSPYDEETLKAGMA HHHHHEEEEEEECCHHHHHHHHHCEEEECCCCCCCCCEEEEECCCCCCCCCHHHHHCCHH DQLFAFIQSAAMTASSNAQESAE HHHHHHHHHHHHHCCCCCHHCCC >Mature Secondary Structure MRMMSRICTRLPAAAMATLIAACASSAEPAAPVWTVFADGPAQSVQDRFGEAPLAYSVAW CCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHCCCCEEEEEEH SELKLDPEQGETSATISGTAYLVACDCDRTERPVMFLFNGGPGASSSPLHFSMGPKARGK HHEEECCCCCCCCEEECCEEEEEEECCCCCCCCEEEEECCCCCCCCCCEEEECCCCCCCC EGEFPDNPYTVLRAADLVFIDPVDTGFSRTHSEDGKARYLGVEGDVDAVNRYIRAWLDGN CCCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCC GRRAAPVLLAGQSYGGTRLSNLVAEVDDLDVRGLVMVSPALDSGAGQTDLGHVFALPTMA CCEECEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCEEEHHHHH ATAWRFGRSGIEAESEAEAWDIAREYAETGYLLALQQGDLIAPEEKAAVAADIASMTGLS HHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCC AGDVLGADLRVDIQFFLENVLSTDGLLVSRLNTGVTSPLPSPDVNSHRPAAANDPSLGLG CCCEECCCCEEHHHHHHHHHHCCCCEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RSNIILSSEIAKYLSEVTGVQRGEAYRSLNLDANFAWDWRSSAKSPNFYVSAAPVLSQFM CCCEEEHHHHHHHHHHHHCCCCCCHHEEECCCCCEEECHHCCCCCCCEEEEHHHHHHHHH QEKERVRLLVFAGYRDLATTLLGTRYALTHNDLPQDRVTLAALPGGHSPYDEETLKAGMA HHHHHEEEEEEECCHHHHHHHHHCEEEECCCCCCCCCEEEEECCCCCCCCCHHHHHCCHH DQLFAFIQSAAMTASSNAQESAE HHHHHHHHHHHHHCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA