Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is uhpA [C]

Identifier: 114797500

GI number: 114797500

Start: 2599002

End: 2599937

Strand: Direct

Name: uhpA [C]

Synonym: HNE_2471

Alternate gene names: 114797500

Gene position: 2599002-2599937 (Clockwise)

Preceding gene: 114798951

Following gene: 114798470

Centisome position: 70.15

GC content: 52.67

Gene sequence:

>936_bases
ATGAGTTATGAAACCACCGACTTCCTGTTCGAGCTTTACCACAACGCGTCGCAACGCAGGCCGGAAGACTTTCGGCTTCA
TACTTTGAAGAAGCTCCAATCCCTGATCCCCTTTGATTTTGCTGTATGGGGCGGCGGCTGGGCCGATGGCCGGCTTGTTT
CTGATCTTACTGTACTAGACCAAAGCGAAGCCGTTCTGAAAGACTGGGAAGCCGTCGCCGATCAGGATGCATTCTGCGAT
TTGACCTTACGCCACCTGGGCACCACTGCGCGCTTCGATGATGTTCCGGAGTTTCGTAGGAGCTTCGCCTACAATGAGCA
TTGGCGGCAGGTAAATGCCTCACACATGATGGCGACGATCAAAGCCGAGCATACGGATGGGTATGTGAGTTTTGTCGGTC
TTTGTGCGGATGACAGACCATCCGAATTTTCAGAAACAGAACGCTCCTTCAAGCAGGCGTTGATGCCGCACCTCTCGCAG
GCATTGCGTATCAATCGCGAACTTTGGACGCATCGGACATTTCAAAAAGAAGAAGCTGTCGCTCTGGTGGATCAGGAGGG
TTGGATACTTTTAGAACACGGCGCTTTTCGGGAATTCACATCCGCAGAATGGGGCGATTTCTCAGCGCGCATTCCGCCGG
AAGTCATGGGCACTCTGGTTAAAACACATTACTGGCGCGGACAGTCTCTGACTGCGCGATTGTCAGATTTCGATAGTCAT
TATTTTATTCACATCCTTTTCCAGCCAGAACTGGCGTGTCTAACGCCGCGTGAAAGGCAGGTCGCCGAGCTTTTTGCCAC
GGGCATGACCCACAAACAGGTCGCCGCCACTTTGGATACTTCGCCATCCACAGTCCGGAATCAGCTCGTTCGGATTTATG
ACAAGCTCGGTATTTCCAGCAAAGCCTCGCTTGCTGCGTTGCTCAGGCAAGCCTGA

Upstream 100 bases:

>100_bases
GGGCATATATCAATCTTGCGTTCATCCAAAAAACACTCGCTCTGGTCTCAACCTCCACTGATTTGCATTGTATTCACATA
CGCGTTAATTCGTCTGACAG

Downstream 100 bases:

>100_bases
TCTGAACGAAAACCGCGCAATTCCCGCCTGGGCCATTTGCACTATTTTCTCTGCTGACTACCCAAGGCTACGCTACTCCC
GGAAATGATCTTCTGGCCGC

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator LuxR Family; GerE Family Transcriptional Regulator; Transcriptional Regulator; Response Regulator; Regulatory Protein LuxR

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MSYETTDFLFELYHNASQRRPEDFRLHTLKKLQSLIPFDFAVWGGGWADGRLVSDLTVLDQSEAVLKDWEAVADQDAFCD
LTLRHLGTTARFDDVPEFRRSFAYNEHWRQVNASHMMATIKAEHTDGYVSFVGLCADDRPSEFSETERSFKQALMPHLSQ
ALRINRELWTHRTFQKEEAVALVDQEGWILLEHGAFREFTSAEWGDFSARIPPEVMGTLVKTHYWRGQSLTARLSDFDSH
YFIHILFQPELACLTPRERQVAELFATGMTHKQVAATLDTSPSTVRNQLVRIYDKLGISSKASLAALLRQA

Sequences:

>Translated_311_residues
MSYETTDFLFELYHNASQRRPEDFRLHTLKKLQSLIPFDFAVWGGGWADGRLVSDLTVLDQSEAVLKDWEAVADQDAFCD
LTLRHLGTTARFDDVPEFRRSFAYNEHWRQVNASHMMATIKAEHTDGYVSFVGLCADDRPSEFSETERSFKQALMPHLSQ
ALRINRELWTHRTFQKEEAVALVDQEGWILLEHGAFREFTSAEWGDFSARIPPEVMGTLVKTHYWRGQSLTARLSDFDSH
YFIHILFQPELACLTPRERQVAELFATGMTHKQVAATLDTSPSTVRNQLVRIYDKLGISSKASLAALLRQA
>Mature_310_residues
SYETTDFLFELYHNASQRRPEDFRLHTLKKLQSLIPFDFAVWGGGWADGRLVSDLTVLDQSEAVLKDWEAVADQDAFCDL
TLRHLGTTARFDDVPEFRRSFAYNEHWRQVNASHMMATIKAEHTDGYVSFVGLCADDRPSEFSETERSFKQALMPHLSQA
LRINRELWTHRTFQKEEAVALVDQEGWILLEHGAFREFTSAEWGDFSARIPPEVMGTLVKTHYWRGQSLTARLSDFDSHY
FIHILFQPELACLTPRERQVAELFATGMTHKQVAATLDTSPSTVRNQLVRIYDKLGISSKASLAALLRQA

Specific function: Appears To Be The Positive Activator Of Uhpt Transcription. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35691; Mature: 35559

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYETTDFLFELYHNASQRRPEDFRLHTLKKLQSLIPFDFAVWGGGWADGRLVSDLTVLD
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEHHHHHHHC
QSEAVLKDWEAVADQDAFCDLTLRHLGTTARFDDVPEFRRSFAYNEHWRQVNASHMMATI
CCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHCHHHHHHHCCHHHHEEEE
KAEHTDGYVSFVGLCADDRPSEFSETERSFKQALMPHLSQALRINRELWTHRTFQKEEAV
EECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
ALVDQEGWILLEHGAFREFTSAEWGDFSARIPPEVMGTLVKTHYWRGQSLTARLSDFDSH
EEEECCCEEEEECCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCC
YFIHILFQPELACLTPRERQVAELFATGMTHKQVAATLDTSPSTVRNQLVRIYDKLGISS
EEEEEEECCCCEECCCCHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC
KASLAALLRQA
HHHHHHHHHCC
>Mature Secondary Structure 
SYETTDFLFELYHNASQRRPEDFRLHTLKKLQSLIPFDFAVWGGGWADGRLVSDLTVLD
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEHHHHHHHC
QSEAVLKDWEAVADQDAFCDLTLRHLGTTARFDDVPEFRRSFAYNEHWRQVNASHMMATI
CCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHCHHHHHHHCCHHHHEEEE
KAEHTDGYVSFVGLCADDRPSEFSETERSFKQALMPHLSQALRINRELWTHRTFQKEEAV
EECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
ALVDQEGWILLEHGAFREFTSAEWGDFSARIPPEVMGTLVKTHYWRGQSLTARLSDFDSH
EEEECCCEEEEECCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCC
YFIHILFQPELACLTPRERQVAELFATGMTHKQVAATLDTSPSTVRNQLVRIYDKLGISS
EEEEEEECCCCEECCCCHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC
KASLAALLRQA
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA