| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is marR [C]
Identifier: 114797453
GI number: 114797453
Start: 3302571
End: 3303032
Strand: Direct
Name: marR [C]
Synonym: HNE_3121
Alternate gene names: 114797453
Gene position: 3302571-3303032 (Clockwise)
Preceding gene: 114797315
Following gene: 114799406
Centisome position: 89.14
GC content: 64.72
Gene sequence:
>462_bases ATGTCCGAAATCCAGACTGTCTCCGCGCTTGACGCGCATCTTGGCTATTGGCTGCGCATGGTGTCGAATGCCGTCTCGCA AAGCTTTGCTCGCGCGCTGGATGGTGAAGGCGTCACCGTGGCTGAATGGGTGCTGCTGCGCACGCTGCATGACGCGGCAG AGACCTCGCCCAGCCGCGTGGCCGCCACGCTCGGCATGACGAAAGGTGCCATCACCAAGCTGGCCGACCGGCTGATCGAC AAGGGGCTGATACGGCGCAAGGCAGACCCGGCCGATGGCCGCGCCCAGCTGCTGGCGCTGACGCCCCGCGCGCGTAAGCT GGTGCCGAAACTTGCCGCGCTGGCGGACGCCAATGACGGCACGTTTTTCTCCGGCCTCAAACCGGCAGAGCGCGCCGAGC TTGAGCGGCTTCTGATGAAAATCATCGCTGACCGGGGCATCACCGAAATCCCTGCCAGCTAA
Upstream 100 bases:
>100_bases CCGCCCCTTTCCACGGCTCCCCTTTTCTGATCGTGGGTCTTTTATTTAGTTGACTAGGAAACTTATTTGATTTAGTTTCC TAGTCAATCAAGAGGCTTCC
Downstream 100 bases:
>100_bases CGCCTGCCGCCTACCTCACCCCTTGAAAGGAACCGCGCCATGGACGCGCAGAAGATCGCTATTGCCGAAAAATGTATCGC TGGCGCCTATGCCGATACGC
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: MarR Family Transcriptional Regulator; Transcriptional Regulator MarR Family; Transcriptional Regulator Marr Family
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MSEIQTVSALDAHLGYWLRMVSNAVSQSFARALDGEGVTVAEWVLLRTLHDAAETSPSRVAATLGMTKGAITKLADRLID KGLIRRKADPADGRAQLLALTPRARKLVPKLAALADANDGTFFSGLKPAERAELERLLMKIIADRGITEIPAS
Sequences:
>Translated_153_residues MSEIQTVSALDAHLGYWLRMVSNAVSQSFARALDGEGVTVAEWVLLRTLHDAAETSPSRVAATLGMTKGAITKLADRLID KGLIRRKADPADGRAQLLALTPRARKLVPKLAALADANDGTFFSGLKPAERAELERLLMKIIADRGITEIPAS >Mature_152_residues SEIQTVSALDAHLGYWLRMVSNAVSQSFARALDGEGVTVAEWVLLRTLHDAAETSPSRVAATLGMTKGAITKLADRLIDK GLIRRKADPADGRAQLLALTPRARKLVPKLAALADANDGTFFSGLKPAERAELERLLMKIIADRGITEIPAS
Specific function: Repressor Of The Marrab Operon Which Is Involved In The Activation Of Both Antibiotic Resistance And Oxidative Stress Genes. Binds To The Maro Operator/Promoter Site. [C]
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16446; Mature: 16315
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEIQTVSALDAHLGYWLRMVSNAVSQSFARALDGEGVTVAEWVLLRTLHDAAETSPSRV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHH AATLGMTKGAITKLADRLIDKGLIRRKADPADGRAQLLALTPRARKLVPKLAALADANDG HHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCC TFFSGLKPAERAELERLLMKIIADRGITEIPAS CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SEIQTVSALDAHLGYWLRMVSNAVSQSFARALDGEGVTVAEWVLLRTLHDAAETSPSRV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHH AATLGMTKGAITKLADRLIDKGLIRRKADPADGRAQLLALTPRARKLVPKLAALADANDG HHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCC TFFSGLKPAERAELERLLMKIIADRGITEIPAS CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA