Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114797439

Identifier: 114797439

GI number: 114797439

Start: 496831

End: 498690

Strand: Reverse

Name: 114797439

Synonym: HNE_0506

Alternate gene names: NA

Gene position: 498690-496831 (Counterclockwise)

Preceding gene: 114800307

Following gene: 114798720

Centisome position: 13.46

GC content: 60.81

Gene sequence:

>1860_bases
ATGGTATCTCGTCCGATCGCGCTTCTCGCTGCCGCCCTTCTCATCGCCTCGTGTGGCACGCCGGCTCACCGCGAACCGCG
CGTCCCGGAATATTCCGCCGAAGTGATCGCTGCCGAATCCGAGCGGCTGAACGCATGGTTCGAGCAGACCTTCGAAGCCG
CCCTCGCCCGCGACCCCATGCGCCTGACCATGCTGGGCCGCCGCGACCGGTACGGGGAATGGACCGACCCTTCCCCTGAG
TTCGAAGCTGAAACGCTGGCCCTGCAACAGGCCAGTGTTCAGGAAATGAAAGACACGTTTGATTTCAACAAGCTGGACAG
CCAGGCCCAGCTTTCCTGGCGGTTGGCGGTGTATGAACTTGAACGCGCAGAGGCGGACGCCGCGTTCCCTCACCACAGCT
ACACCTTCAACCAGATGTTCGGCGTCCAGTCCGCAGTCCCCGCTTTCCTCATCAACCAGCACAAGGCCACCAGCGCAGCA
GATCTCGACGCCTACATTGCGCGGCTTGAAGGCCTGCCCGCCTATCTCGGCCAGCATGTCGAAAACGCCAGGGTGTCTGC
CGGAATGGGCATTCAGCCGCCGTCCTTCGTGTATGATTATGTCCTGACAGACGCGCAGGGCCTGATAACCGGCCACCCCT
TCTCCGGCGCGGCCGATGGCAGTGCAGACAGCCCCCTGATGTCAGATTTCCGCGGCAAGACGGCCGCCCTTGTCACCAAT
GGCACGCTGACCGAAGCGGACGCCGAAGCGTTCATCCAGCGCGCCGAAGCAGCGCTCATATCCTCCGTTGGCCCCGCCTA
CACCGGCGCCATTGAGGAACTGACCCGCCAGCAACTCAACGCCACCGCCGATGACGGCATCTGGAAGCTGCCCGACGGGG
CGGACTATTACGAAACCCGCCTCAAGGCGATGACGACCACAGACCTTACCGCCGAAGAAATCCATCAGATCGGCCTGGAT
GAAATCGCCCGCATCCATGGGGAAATGCAGATCATCATGGAACAGGTCGGCTTTGAGGGCGATCTGCAGGATTTCTTTCA
GTTCATGCGGACTGATCCGCGCTTCTACAAGCCGGAAACACCGGAAGGGCGTGAGGAATACCTCGCTGAAGCGCGTGAAG
CGATTGCGCGCATGGAAGGAGACCTCCCCAGCCTCTTCCACACTTTTCCCAAGGCCGGCATGATTGTGCAGGCCGTTGAG
CCCTTCCGCGAAAAATCCGCCGGCAAAGCGTTCTACAGCCGCCCAGCCCCCGATGGCAGCCGGCCAGGCGTCTACTACGC
CAACCTTTACCGCATGGCCGATATGCCGACCTATCAGCTGGAAGCCCTTGCTTTCCATGAGGGCATTCCCGGCCACCATA
TGCAGATCGCCATTGCCCAGGAGCTGGACGGCATCCCCAGCTTCCGCAAATTCGGCGGCTACACGGCCTATTCCGAAGGC
TGGGGCCTCTATACCGAGCTTCTGCCCAAGGAAATCGGTTATTATTCCGATCCGTATTCGGACTTTGGCCGTCTTGCCAT
GGAGATCTGGCGCGCCGCACGTCTCGTTGTTGATACCGGCATTCACTCAAAACAATGGACGCGCGAACAGGCCGTCCAGT
ATCTCATGGACAATACGCCCAACCCGGAAGGTGACTGCCGCAAGGCCATCGACCGCTATATCGTGATGCCGGGCCAGGCG
ACCGCCTACAAGATCGGCATGCTGAAGATCGTCGAACTGCGCGACCGTGCGCGCGCAGAGCTTGGCGAGGCCTTTGACAT
CCGCGATTTTCATGATGTGGTTCTCAAGGATGGGGCCGTCCCGCTGGCTATCCTCGAGGAGAATGTCGACGCATGGATCG
CCGAGTCAAAACCCGTCTGA

Upstream 100 bases:

>100_bases
ACTAGACTACCAGTTCTCGCACGGCAAAGGTTAACGAACCCGAAAAAGCCGTTAATACAGACTGAGCAATCTTCCCCAAC
TGAACAGGATTCGGCTTACC

Downstream 100 bases:

>100_bases
ACAGACGGCACCTGAAGGCGGGCGCGGCCCTCGCGCTCGCCATGATGGTGCTTTCAGGCTGCAACACGCTGACCAGCGCG
CTTCTCGCGCCAAAAATCGA

Product: putative lipoprotein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 619; Mature: 619

Protein sequence:

>619_residues
MVSRPIALLAAALLIASCGTPAHREPRVPEYSAEVIAAESERLNAWFEQTFEAALARDPMRLTMLGRRDRYGEWTDPSPE
FEAETLALQQASVQEMKDTFDFNKLDSQAQLSWRLAVYELERAEADAAFPHHSYTFNQMFGVQSAVPAFLINQHKATSAA
DLDAYIARLEGLPAYLGQHVENARVSAGMGIQPPSFVYDYVLTDAQGLITGHPFSGAADGSADSPLMSDFRGKTAALVTN
GTLTEADAEAFIQRAEAALISSVGPAYTGAIEELTRQQLNATADDGIWKLPDGADYYETRLKAMTTTDLTAEEIHQIGLD
EIARIHGEMQIIMEQVGFEGDLQDFFQFMRTDPRFYKPETPEGREEYLAEAREAIARMEGDLPSLFHTFPKAGMIVQAVE
PFREKSAGKAFYSRPAPDGSRPGVYYANLYRMADMPTYQLEALAFHEGIPGHHMQIAIAQELDGIPSFRKFGGYTAYSEG
WGLYTELLPKEIGYYSDPYSDFGRLAMEIWRAARLVVDTGIHSKQWTREQAVQYLMDNTPNPEGDCRKAIDRYIVMPGQA
TAYKIGMLKIVELRDRARAELGEAFDIRDFHDVVLKDGAVPLAILEENVDAWIAESKPV

Sequences:

>Translated_619_residues
MVSRPIALLAAALLIASCGTPAHREPRVPEYSAEVIAAESERLNAWFEQTFEAALARDPMRLTMLGRRDRYGEWTDPSPE
FEAETLALQQASVQEMKDTFDFNKLDSQAQLSWRLAVYELERAEADAAFPHHSYTFNQMFGVQSAVPAFLINQHKATSAA
DLDAYIARLEGLPAYLGQHVENARVSAGMGIQPPSFVYDYVLTDAQGLITGHPFSGAADGSADSPLMSDFRGKTAALVTN
GTLTEADAEAFIQRAEAALISSVGPAYTGAIEELTRQQLNATADDGIWKLPDGADYYETRLKAMTTTDLTAEEIHQIGLD
EIARIHGEMQIIMEQVGFEGDLQDFFQFMRTDPRFYKPETPEGREEYLAEAREAIARMEGDLPSLFHTFPKAGMIVQAVE
PFREKSAGKAFYSRPAPDGSRPGVYYANLYRMADMPTYQLEALAFHEGIPGHHMQIAIAQELDGIPSFRKFGGYTAYSEG
WGLYTELLPKEIGYYSDPYSDFGRLAMEIWRAARLVVDTGIHSKQWTREQAVQYLMDNTPNPEGDCRKAIDRYIVMPGQA
TAYKIGMLKIVELRDRARAELGEAFDIRDFHDVVLKDGAVPLAILEENVDAWIAESKPV
>Mature_619_residues
MVSRPIALLAAALLIASCGTPAHREPRVPEYSAEVIAAESERLNAWFEQTFEAALARDPMRLTMLGRRDRYGEWTDPSPE
FEAETLALQQASVQEMKDTFDFNKLDSQAQLSWRLAVYELERAEADAAFPHHSYTFNQMFGVQSAVPAFLINQHKATSAA
DLDAYIARLEGLPAYLGQHVENARVSAGMGIQPPSFVYDYVLTDAQGLITGHPFSGAADGSADSPLMSDFRGKTAALVTN
GTLTEADAEAFIQRAEAALISSVGPAYTGAIEELTRQQLNATADDGIWKLPDGADYYETRLKAMTTTDLTAEEIHQIGLD
EIARIHGEMQIIMEQVGFEGDLQDFFQFMRTDPRFYKPETPEGREEYLAEAREAIARMEGDLPSLFHTFPKAGMIVQAVE
PFREKSAGKAFYSRPAPDGSRPGVYYANLYRMADMPTYQLEALAFHEGIPGHHMQIAIAQELDGIPSFRKFGGYTAYSEG
WGLYTELLPKEIGYYSDPYSDFGRLAMEIWRAARLVVDTGIHSKQWTREQAVQYLMDNTPNPEGDCRKAIDRYIVMPGQA
TAYKIGMLKIVELRDRARAELGEAFDIRDFHDVVLKDGAVPLAILEENVDAWIAESKPV

Specific function: Unknown

COG id: COG4805

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68940; Mature: 68940

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSRPIALLAAALLIASCGTPAHREPRVPEYSAEVIAAESERLNAWFEQTFEAALARDPM
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHEEHHHHHHHHHHHHHHHHHHHCCCE
RLTMLGRRDRYGEWTDPSPEFEAETLALQQASVQEMKDTFDFNKLDSQAQLSWRLAVYEL
EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHH
ERAEADAAFPHHSYTFNQMFGVQSAVPAFLINQHKATSAADLDAYIARLEGLPAYLGQHV
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHH
ENARVSAGMGIQPPSFVYDYVLTDAQGLITGHPFSGAADGSADSPLMSDFRGKTAALVTN
HHHHHHCCCCCCCHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCHHHHHCCCEEEEEEC
GTLTEADAEAFIQRAEAALISSVGPAYTGAIEELTRQQLNATADDGIWKLPDGADYYETR
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHHH
LKAMTTTDLTAEEIHQIGLDEIARIHGEMQIIMEQVGFEGDLQDFFQFMRTDPRFYKPET
HHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCC
PEGREEYLAEAREAIARMEGDLPSLFHTFPKAGMIVQAVEPFREKSAGKAFYSRPAPDGS
CCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCC
RPGVYYANLYRMADMPTYQLEALAFHEGIPGHHMQIAIAQELDGIPSFRKFGGYTAYSEG
CCCEEHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEHHHCCCCCCHHHHCCCCCCCCC
WGLYTELLPKEIGYYSDPYSDFGRLAMEIWRAARLVVDTGIHSKQWTREQAVQYLMDNTP
CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
NPEGDCRKAIDRYIVMPGQATAYKIGMLKIVELRDRARAELGEAFDIRDFHDVVLKDGAV
CCCHHHHHHHHHEEECCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC
PLAILEENVDAWIAESKPV
EEEEECCCCHHHCCCCCCC
>Mature Secondary Structure
MVSRPIALLAAALLIASCGTPAHREPRVPEYSAEVIAAESERLNAWFEQTFEAALARDPM
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHEEHHHHHHHHHHHHHHHHHHHCCCE
RLTMLGRRDRYGEWTDPSPEFEAETLALQQASVQEMKDTFDFNKLDSQAQLSWRLAVYEL
EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHH
ERAEADAAFPHHSYTFNQMFGVQSAVPAFLINQHKATSAADLDAYIARLEGLPAYLGQHV
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHH
ENARVSAGMGIQPPSFVYDYVLTDAQGLITGHPFSGAADGSADSPLMSDFRGKTAALVTN
HHHHHHCCCCCCCHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCHHHHHCCCEEEEEEC
GTLTEADAEAFIQRAEAALISSVGPAYTGAIEELTRQQLNATADDGIWKLPDGADYYETR
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHHH
LKAMTTTDLTAEEIHQIGLDEIARIHGEMQIIMEQVGFEGDLQDFFQFMRTDPRFYKPET
HHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCC
PEGREEYLAEAREAIARMEGDLPSLFHTFPKAGMIVQAVEPFREKSAGKAFYSRPAPDGS
CCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCC
RPGVYYANLYRMADMPTYQLEALAFHEGIPGHHMQIAIAQELDGIPSFRKFGGYTAYSEG
CCCEEHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEHHHCCCCCCHHHHCCCCCCCCC
WGLYTELLPKEIGYYSDPYSDFGRLAMEIWRAARLVVDTGIHSKQWTREQAVQYLMDNTP
CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
NPEGDCRKAIDRYIVMPGQATAYKIGMLKIVELRDRARAELGEAFDIRDFHDVVLKDGAV
CCCHHHHHHHHHEEECCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC
PLAILEENVDAWIAESKPV
EEEEECCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA