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The map label for this gene is 114797436

Identifier: 114797436

GI number: 114797436

Start: 1768669

End: 1769844

Strand: Direct

Name: 114797436

Synonym: HNE_1725

Alternate gene names: NA

Gene position: 1768669-1769844 (Clockwise)

Preceding gene: 114799397

Following gene: 114799140

Centisome position: 47.74

GC content: 54.34

Gene sequence:

>1176_bases
ATGCGACCGATCCTGCTAGATGGCGCAAAGCGATGCAGGGCGTTGCGGCAAACCGACGCGAACAAGCGCGCGATCGATGC
GATGCTTTGTATCTTGATGATCGCGCGGATCGCCCCGAGTGCCGACTTTCTCCTGCTTTCGGCCATGATGAAAAACACCG
AGGAGCTTGCTGGATGGATTGAGGAGCTAACAGGCCGACCATCACTCTCGTTCGACGATAGCTGGAAGCCAACCCGTCAG
ATACGAGGGTGTGTTGTTTATGATTTGGCCCAGTTGAGAGCGCTCCAGAAAACCCTCACCACCGCCAAAACCACAGCAAC
AAGTGGCGTTCCTAAACGCCTCAAAGATCAAATTTCGGCCCCAGTGTTTGGTTTTTTCAGTGTGCAGCAGACTTGGGCGA
CTACCGAGCGAGAGCGCTACGTTCTTTTGCCTTTTCACCGCGATCCTCTGCCGCTGGCGACAAACAAGTTTTGGAAACTG
ACCCCAAATGCCGGAGAGGTCGCATCGGCTCTCGCGGCTGACGCGGCGCGCGCCCACATTCGAACTTTGGTCTTTGCCAC
AACCATTCCCAATGCCTCATCCATCGCGAATAGAGCAGCGGAAGCACTAGGCCCATGTAGCGTCGATCTGAATGAAGCTG
AACAACGTTTGCTAGATACGATAATCGACGAAGTCGGGCATGTTCGGCACCTCTATCTTCCGCTCAAAGACGGAAAACTC
ATTGGTCGCGCAGCGTGCCATCATGGGCAATTGTTGCCGGAGGAGCGCCAATTAGTCGAACGTCTTTATCGACGAAACGG
CGCGATTTCTGTGCTTGCAGCCACGTCAACCTTGGCGCAGGGGATGAATCTACCGGCGGAATTGGTTATCCTTTCAAGCG
ACAGCGAGTTTCAGCCGGATACTGGCAAGCAAAGCATTCTGAAAGCAGAAGATCTCTTAAACGCCGCCGGCCGTGCCGGA
CGGGCTGGAGAGAACGCGACCGGGATGGTCTTGATCATTCCGAGCAAAGTGACAGGCATTGATGATCAAGAAAACCTGAT
CGGCACGCAGTGGAGAAAGCTTCAAGAGATTTTTTCGCAAGCGGATCAATGCCTCATCATCGACGATCCATTGATGGCGG
TGATGGACCGCATCCATATCGAGACGGATGCTGTGTCTCGCGCACCAAACCCCTGA

Upstream 100 bases:

>100_bases
GCCCTCGTCGCTTTCTCAGGTCCGTTTCATTTGGCGAGCCTGCTCATCATTCTTGGGCGCTCATTATTGGACGGTGCGGT
CGTCAATTTGCCGGCACCGG

Downstream 100 bases:

>100_bases
TGCGGCTTGTTCTCAACCAGATTGCGCGCCGGCTGACCGAGCAGGAGCCCGATCCCTCGCGGCGGAAGCTGCTCCTGATG
CTGGACGAGTTCCCGGCCCT

Product: putative helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MRPILLDGAKRCRALRQTDANKRAIDAMLCILMIARIAPSADFLLLSAMMKNTEELAGWIEELTGRPSLSFDDSWKPTRQ
IRGCVVYDLAQLRALQKTLTTAKTTATSGVPKRLKDQISAPVFGFFSVQQTWATTERERYVLLPFHRDPLPLATNKFWKL
TPNAGEVASALAADAARAHIRTLVFATTIPNASSIANRAAEALGPCSVDLNEAEQRLLDTIIDEVGHVRHLYLPLKDGKL
IGRAACHHGQLLPEERQLVERLYRRNGAISVLAATSTLAQGMNLPAELVILSSDSEFQPDTGKQSILKAEDLLNAAGRAG
RAGENATGMVLIIPSKVTGIDDQENLIGTQWRKLQEIFSQADQCLIIDDPLMAVMDRIHIETDAVSRAPNP

Sequences:

>Translated_391_residues
MRPILLDGAKRCRALRQTDANKRAIDAMLCILMIARIAPSADFLLLSAMMKNTEELAGWIEELTGRPSLSFDDSWKPTRQ
IRGCVVYDLAQLRALQKTLTTAKTTATSGVPKRLKDQISAPVFGFFSVQQTWATTERERYVLLPFHRDPLPLATNKFWKL
TPNAGEVASALAADAARAHIRTLVFATTIPNASSIANRAAEALGPCSVDLNEAEQRLLDTIIDEVGHVRHLYLPLKDGKL
IGRAACHHGQLLPEERQLVERLYRRNGAISVLAATSTLAQGMNLPAELVILSSDSEFQPDTGKQSILKAEDLLNAAGRAG
RAGENATGMVLIIPSKVTGIDDQENLIGTQWRKLQEIFSQADQCLIIDDPLMAVMDRIHIETDAVSRAPNP
>Mature_391_residues
MRPILLDGAKRCRALRQTDANKRAIDAMLCILMIARIAPSADFLLLSAMMKNTEELAGWIEELTGRPSLSFDDSWKPTRQ
IRGCVVYDLAQLRALQKTLTTAKTTATSGVPKRLKDQISAPVFGFFSVQQTWATTERERYVLLPFHRDPLPLATNKFWKL
TPNAGEVASALAADAARAHIRTLVFATTIPNASSIANRAAEALGPCSVDLNEAEQRLLDTIIDEVGHVRHLYLPLKDGKL
IGRAACHHGQLLPEERQLVERLYRRNGAISVLAATSTLAQGMNLPAELVILSSDSEFQPDTGKQSILKAEDLLNAAGRAG
RAGENATGMVLIIPSKVTGIDDQENLIGTQWRKLQEIFSQADQCLIIDDPLMAVMDRIHIETDAVSRAPNP

Specific function: Unknown

COG id: COG4581

COG function: function code L; Superfamily II RNA helicase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI133930973, Length=128, Percent_Identity=37.5, Blast_Score=69, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6323430, Length=100, Percent_Identity=41, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR010995
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR022965
- InterPro:   IPR003583 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: NA

Molecular weight: Translated: 42916; Mature: 42916

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPILLDGAKRCRALRQTDANKRAIDAMLCILMIARIAPSADFLLLSAMMKNTEELAGWI
CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHH
EELTGRPSLSFDDSWKPTRQIRGCVVYDLAQLRALQKTLTTAKTTATSGVPKRLKDQISA
HHHCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC
PVFGFFSVQQTWATTERERYVLLPFHRDPLPLATNKFWKLTPNAGEVASALAADAARAHI
CEEEHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHH
RTLVFATTIPNASSIANRAAEALGPCSVDLNEAEQRLLDTIIDEVGHVRHLYLPLKDGKL
HHHHEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCH
IGRAACHHGQLLPEERQLVERLYRRNGAISVLAATSTLAQGMNLPAELVILSSDSEFQPD
HHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHCCCCCEEEEEEECCCCCCCC
TGKQSILKAEDLLNAAGRAGRAGENATGMVLIIPSKVTGIDDQENLIGTQWRKLQEIFSQ
CCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHC
ADQCLIIDDPLMAVMDRIHIETDAVSRAPNP
CCCEEEECCHHHHHHHHHHCCHHHHCCCCCC
>Mature Secondary Structure
MRPILLDGAKRCRALRQTDANKRAIDAMLCILMIARIAPSADFLLLSAMMKNTEELAGWI
CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHH
EELTGRPSLSFDDSWKPTRQIRGCVVYDLAQLRALQKTLTTAKTTATSGVPKRLKDQISA
HHHCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC
PVFGFFSVQQTWATTERERYVLLPFHRDPLPLATNKFWKLTPNAGEVASALAADAARAHI
CEEEHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHH
RTLVFATTIPNASSIANRAAEALGPCSVDLNEAEQRLLDTIIDEVGHVRHLYLPLKDGKL
HHHHEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCH
IGRAACHHGQLLPEERQLVERLYRRNGAISVLAATSTLAQGMNLPAELVILSSDSEFQPD
HHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHCCCCCEEEEEEECCCCCCCC
TGKQSILKAEDLLNAAGRAGRAGENATGMVLIIPSKVTGIDDQENLIGTQWRKLQEIFSQ
CCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHC
ADQCLIIDDPLMAVMDRIHIETDAVSRAPNP
CCCEEEECCHHHHHHHHHHCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA