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The map label for this gene is 114797395

Identifier: 114797395

GI number: 114797395

Start: 1384163

End: 1384987

Strand: Reverse

Name: 114797395

Synonym: HNE_1350

Alternate gene names: NA

Gene position: 1384987-1384163 (Counterclockwise)

Preceding gene: 114797523

Following gene: 114797756

Centisome position: 37.38

GC content: 62.06

Gene sequence:

>825_bases
ATGGCCGCCGAGCGGGAAATTGCCGCCCGGCATATCGACCGCTTCCCGTGGGGCTCCGTGCTGTGGGCGTTTGCCAATCT
TGCCTGCTGGCTGGCCCTCTGGCCACTGACGATTTCGGGCGTCCTGCCGGTATGGGCGGCGTTTCCCATCGCCTGTGCAA
ACATGGCGCTCTGCTATCTGCCCAGCCATGAGGCCCAGCATGACATCATCGCCCGGCCCGGATCAAAGCTCCGTTGGCTG
AATGAACTGGTCGGGCATCTCTCCACGATCCCGATCCTCCTGCCCTACCGCGTGGCGAAGCTGACCCATCTGGAGCACCA
CAAGCACGCCAACCATCCCGAGCTTGATCCCGATTACGGCACCCATGCCGACACCGCCCTGCAATCGATGTGGCAGACCA
TAAACCAGCAGCAGCCAGGCACGAAAAACAATGCCTATGCCACAACGCTGGCGCGGATCGGCCGGCCGAAAGTGGCACTC
GACGCGGTGATCTATGAACTGGCTTATTACGCGATCATGATCGCGCTCTGCTGGAGCGGCCATGCCATCGAGGCGGCGCT
GATCTGGTTCCTGCCCAAGCATATCGGCATGATCTACATCCGCCATTATCTCAGCTGGGCGCCGCACAATCCCGGCATGG
GCGAAGGCCGCTACCGCGACACGCGCGGGTTCCGTTCAGCCGTCGGAAATGTGCTGTCGATGGGCATGCAATATCACATC
GTCCACCACCTGCACCCGCGCATCCCCCTGATGCGCACACCCCGCGCCTATTGGGAAATGCGGGAGATTCTGGAAGCACG
CGGCTGCCGGATGGATGGTCTTTAG

Upstream 100 bases:

>100_bases
CGATCGGCTTTGCCGTGGCAGCGCTGTGGGGCGGATTTGCGCAATGGAAGGGCCGGTGGATCTGATGGACGGTGCAGGGC
TGCTTTCGGAGAAGGAATTG

Downstream 100 bases:

>100_bases
GCGGGGCTTTCCTGGTTGCGGATATAGGCCGTCATCGCTTCGCTGAGATGATCGAACACAGCCTTCATTCGGGTGACGCC
TTTGAGTTCCTCATGCATCG

Product: fatty acid desaturase family protein

Products: NA

Alternate protein names: Electron Transfer Protein FdxB; Fatty Acid Desaturase; Fatty Acid Desaturase Domain Protein; Phenylacetic Acid Degradation Oxidoreductase; Fatty Acid Desaturase Family Protein; Phthalate 4 5-Dioxygenase; Delta(12)-Fatty Acid Dehydrogenase

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MAAEREIAARHIDRFPWGSVLWAFANLACWLALWPLTISGVLPVWAAFPIACANMALCYLPSHEAQHDIIARPGSKLRWL
NELVGHLSTIPILLPYRVAKLTHLEHHKHANHPELDPDYGTHADTALQSMWQTINQQQPGTKNNAYATTLARIGRPKVAL
DAVIYELAYYAIMIALCWSGHAIEAALIWFLPKHIGMIYIRHYLSWAPHNPGMGEGRYRDTRGFRSAVGNVLSMGMQYHI
VHHLHPRIPLMRTPRAYWEMREILEARGCRMDGL

Sequences:

>Translated_274_residues
MAAEREIAARHIDRFPWGSVLWAFANLACWLALWPLTISGVLPVWAAFPIACANMALCYLPSHEAQHDIIARPGSKLRWL
NELVGHLSTIPILLPYRVAKLTHLEHHKHANHPELDPDYGTHADTALQSMWQTINQQQPGTKNNAYATTLARIGRPKVAL
DAVIYELAYYAIMIALCWSGHAIEAALIWFLPKHIGMIYIRHYLSWAPHNPGMGEGRYRDTRGFRSAVGNVLSMGMQYHI
VHHLHPRIPLMRTPRAYWEMREILEARGCRMDGL
>Mature_273_residues
AAEREIAARHIDRFPWGSVLWAFANLACWLALWPLTISGVLPVWAAFPIACANMALCYLPSHEAQHDIIARPGSKLRWLN
ELVGHLSTIPILLPYRVAKLTHLEHHKHANHPELDPDYGTHADTALQSMWQTINQQQPGTKNNAYATTLARIGRPKVALD
AVIYELAYYAIMIALCWSGHAIEAALIWFLPKHIGMIYIRHYLSWAPHNPGMGEGRYRDTRGFRSAVGNVLSMGMQYHIV
HHLHPRIPLMRTPRAYWEMREILEARGCRMDGL

Specific function: Unknown

COG id: COG3239

COG function: function code I; Fatty acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.14.13.-

Molecular weight: Translated: 31199; Mature: 31068

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAEREIAARHIDRFPWGSVLWAFANLACWLALWPLTISGVLPVWAAFPIACANMALCYL
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC
PSHEAQHDIIARPGSKLRWLNELVGHLSTIPILLPYRVAKLTHLEHHKHANHPELDPDYG
CCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
THADTALQSMWQTINQQQPGTKNNAYATTLARIGRPKVALDAVIYELAYYAIMIALCWSG
CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
HAIEAALIWFLPKHIGMIYIRHYLSWAPHNPGMGEGRYRDTRGFRSAVGNVLSMGMQYHI
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VHHLHPRIPLMRTPRAYWEMREILEARGCRMDGL
HHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
AAEREIAARHIDRFPWGSVLWAFANLACWLALWPLTISGVLPVWAAFPIACANMALCYL
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC
PSHEAQHDIIARPGSKLRWLNELVGHLSTIPILLPYRVAKLTHLEHHKHANHPELDPDYG
CCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
THADTALQSMWQTINQQQPGTKNNAYATTLARIGRPKVALDAVIYELAYYAIMIALCWSG
CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
HAIEAALIWFLPKHIGMIYIRHYLSWAPHNPGMGEGRYRDTRGFRSAVGNVLSMGMQYHI
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VHHLHPRIPLMRTPRAYWEMREILEARGCRMDGL
HHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA