| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is yibF [H]
Identifier: 114797348
GI number: 114797348
Start: 2495836
End: 2496621
Strand: Reverse
Name: yibF [H]
Synonym: HNE_2391
Alternate gene names: 114797348
Gene position: 2496621-2495836 (Counterclockwise)
Preceding gene: 114798335
Following gene: 114797843
Centisome position: 67.38
GC content: 60.56
Gene sequence:
>786_bases ATGACTAACGTGATTGTGTATGAACATCCGCTCTCACCCTATGCGCAGAAGGTGAAAATCTCGCTGCGGGAAAAGGGCGT GCCGTTTGAAACGCGGTTGCCCGAGGGCATCGGCACGGGCGCAACGGCGGGGGGCTTTGCCAAGGCCAATCCGCGCGGCG AGGTGCCAGCGCTGATCCATGGCGATGTGGAGATTTTCGACAGCACGATCATCCTGGAATACATTGAGGACGTGTGGCCC GACCCTGCCATGCTGCCCAAGTCGCCGGCGGACCGTGCCCGTGTGCGGATGATCGAAGACGTGATGGACACCCAGTTTGA GGCGATCACATGGGGCCTTGGCGAGCTCAATTTCTTCCGCCGCGCCGAGGGCGCCAAGAAAGAAGAAATGGAAGCCAAGG CACGCACGCAAGCCGAAGCTTTCTTCAAGGTTCTGGAGGGGTATCTGGGGGACCGCGAGTGGTTCAATGGGGCCAGTTTT GGCTGGGGTGATCTCAGCGTGGTGCCATATCTCAATGGCGCGGCAGGCTTTGACATCCGCCCGGCCGAAAGCTCGCGCCT TGGCGCATGGGCCAAGCGGGCGAATGCGCGTGAAAGCGTGGCGCTGGCGCGGCGCGAGTCCGAAGCCTCTATCGGCGGCA TGAACCAGGTGGATCAGGCGGTTAAGGCCGGCCTGTTCAAGCGTCAGTACCGGGATCATCGTCTGGAATGGATGATGAAG ACGGGCGGAACAGAAATTGTTCTGAAAGGGCTTGAAGCCGGGAACATTCGCTTCACCGGGCCTTGA
Upstream 100 bases:
>100_bases CGCTGCGACGGAAAGGTGGGCTACGGCATGAGCGAGTATCTGGATCAGATCGTGGACGGGCGCCCGCTGGGCCGTCTGGC CGGGTATTGAGGGGAAGAAG
Downstream 100 bases:
>100_bases GGCACACCGGAAATGGAAAACGGGATCAGGCGGTGGCCCGATCCCGTTTTTGTTTGGGGCGCTCTGCCTTACGAAAGAGC GGTGTCGCGGGCGGCCTTCT
Product: glutathione S-transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MTNVIVYEHPLSPYAQKVKISLREKGVPFETRLPEGIGTGATAGGFAKANPRGEVPALIHGDVEIFDSTIILEYIEDVWP DPAMLPKSPADRARVRMIEDVMDTQFEAITWGLGELNFFRRAEGAKKEEMEAKARTQAEAFFKVLEGYLGDREWFNGASF GWGDLSVVPYLNGAAGFDIRPAESSRLGAWAKRANARESVALARRESEASIGGMNQVDQAVKAGLFKRQYRDHRLEWMMK TGGTEIVLKGLEAGNIRFTGP
Sequences:
>Translated_261_residues MTNVIVYEHPLSPYAQKVKISLREKGVPFETRLPEGIGTGATAGGFAKANPRGEVPALIHGDVEIFDSTIILEYIEDVWP DPAMLPKSPADRARVRMIEDVMDTQFEAITWGLGELNFFRRAEGAKKEEMEAKARTQAEAFFKVLEGYLGDREWFNGASF GWGDLSVVPYLNGAAGFDIRPAESSRLGAWAKRANARESVALARRESEASIGGMNQVDQAVKAGLFKRQYRDHRLEWMMK TGGTEIVLKGLEAGNIRFTGP >Mature_260_residues TNVIVYEHPLSPYAQKVKISLREKGVPFETRLPEGIGTGATAGGFAKANPRGEVPALIHGDVEIFDSTIILEYIEDVWPD PAMLPKSPADRARVRMIEDVMDTQFEAITWGLGELNFFRRAEGAKKEEMEAKARTQAEAFFKVLEGYLGDREWFNGASFG WGDLSVVPYLNGAAGFDIRPAESSRLGAWAKRANARESVALARRESEASIGGMNQVDQAVKAGLFKRQYRDHRLEWMMKT GGTEIVLKGLEAGNIRFTGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1790018, Length=143, Percent_Identity=38.4615384615385, Blast_Score=75, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 28910; Mature: 28779
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNVIVYEHPLSPYAQKVKISLREKGVPFETRLPEGIGTGATAGGFAKANPRGEVPALIH CCCEEEEECCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEE GDVEIFDSTIILEYIEDVWPDPAMLPKSPADRARVRMIEDVMDTQFEAITWGLGELNFFR CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH RAEGAKKEEMEAKARTQAEAFFKVLEGYLGDREWFNGASFGWGDLSVVPYLNGAAGFDIR HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCEEEEEEECCCCCCCCC PAESSRLGAWAKRANARESVALARRESEASIGGMNQVDQAVKAGLFKRQYRDHRLEWMMK CCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TGGTEIVLKGLEAGNIRFTGP CCCCEEEEECCCCCCEEECCC >Mature Secondary Structure TNVIVYEHPLSPYAQKVKISLREKGVPFETRLPEGIGTGATAGGFAKANPRGEVPALIH CCEEEEECCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEE GDVEIFDSTIILEYIEDVWPDPAMLPKSPADRARVRMIEDVMDTQFEAITWGLGELNFFR CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH RAEGAKKEEMEAKARTQAEAFFKVLEGYLGDREWFNGASFGWGDLSVVPYLNGAAGFDIR HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCEEEEEEECCCCCCCCC PAESSRLGAWAKRANARESVALARRESEASIGGMNQVDQAVKAGLFKRQYRDHRLEWMMK CCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TGGTEIVLKGLEAGNIRFTGP CCCCEEEEECCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]