| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
Click here to switch to the map view.
The map label for this gene is exoL [H]
Identifier: 114797346
GI number: 114797346
Start: 1213995
End: 1215134
Strand: Direct
Name: exoL [H]
Synonym: HNE_1195
Alternate gene names: 114797346
Gene position: 1213995-1215134 (Clockwise)
Preceding gene: 114799879
Following gene: 114798343
Centisome position: 32.77
GC content: 61.23
Gene sequence:
>1140_bases ATGACGCGAATTGCCTTCTTCGGTCATGACGCGGCAGATGCGGCTGTGCGGCGACGCGTGCGCAGTTTCCAGGGCGACGG GTTTCAGGTTACCGGCTTCATGATGCGCCGGCGTGAGCCGCTCGCTCAGGAGTGGGAAAATGTCGATCTCGGCCAGACAC AGGACGGCGCCTTCCTGCAGCGCATACGTCAGGTTTTCCGCGGTGCCCGCATAGCGGCAGCGTCCGGTGACCGGCTCCGC TCGGCGGATGTCATCTACGCGCGAAACCTGGACATGCTGGCCTGCGCCTTCCTGGCCAAACGCCATGCAAAGCTGGCAAC GCCGGTCATCTACGAGTGCCTCGACATTCACCGCTTGCTGTGCCGGACGGACATTATCGGCAAGGGATTGCGCGCGCTTG AGGGCTGGTTGCTTAAACGATCAAAAGCGCTGGTTGTCTCGTCGCCCGCGTTTCTCAGCCAGCATTTCGAGCGGTACTAT CCCGGCGTGGCCAACGCCTACCTCGTTGAGAACCGCCTGGCAGGGCAATTCGATTATGGCGCCCGGCAATCTCCCGCAAA GGGGCAGGTGGACGGACATATTCGCCTTGGCTGGGTGGGCAATCTGCGGTGCCGCCGCTCGCTGGATCTTCTGTGCGCAC TGGCAGATCAGTTTGGGCCTCGGATCGAAGTGAAGCTGCACGGCGTTCCTGCGCTCACTGAAATCCCCGACTTTGAAAGC AAGATCGCTGCCCGGAATAACATGTCGTATCACGGACGGTACAGGTCGCCTGAAGACCTGCCGGAAATCTATGCCGGTCT GGATGTTGTCTGGTCGGGGGATTTCATGGAGGCTGGCCTCAACTCCACCTGGCTTCTGCCAAACCGTATCTACGAAGGCG GGTATTACTGTGTTCCCCCCATCGCGCCGGCTGGCACGGAAACCGCGCGCTGGATCGCCCGGCATGAATGTGGCTTCCTA CCCGGCGAGCCACTGGAGCAGACGCTTCCGGACCTGATCGAGCGCCTGCTGCGGGACGCCTCGCCCATCGCGGCTAATGG CAGGGCGCTTGAAGCCCTTCCGGAAGAAACCTTCGTACAGCCGGTGGGATTCCTGCGTCAGATCATTGAATCTATCGTGA AACCCAGGGTGGCTTCATGA
Upstream 100 bases:
>100_bases GTATCTCTGCCGAATAGCGGCTTTCCGGAAGCTTACGGGTGCAGGTCACCAGGAGTAGGGGACGCGCAGGCTCTGCCGGC CCGGTCCACAGGGAATGGAA
Downstream 100 bases:
>100_bases TCTGTCCAGTATTGCCCGTTATGGTAATCAGACGCGCGCGCGAGAATTGCCGGATCGCGGAGGTTTCCTGTGTCTGATTA CGCACAATCCCGCAAAAGCG
Product: putative glycosyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MTRIAFFGHDAADAAVRRRVRSFQGDGFQVTGFMMRRREPLAQEWENVDLGQTQDGAFLQRIRQVFRGARIAAASGDRLR SADVIYARNLDMLACAFLAKRHAKLATPVIYECLDIHRLLCRTDIIGKGLRALEGWLLKRSKALVVSSPAFLSQHFERYY PGVANAYLVENRLAGQFDYGARQSPAKGQVDGHIRLGWVGNLRCRRSLDLLCALADQFGPRIEVKLHGVPALTEIPDFES KIAARNNMSYHGRYRSPEDLPEIYAGLDVVWSGDFMEAGLNSTWLLPNRIYEGGYYCVPPIAPAGTETARWIARHECGFL PGEPLEQTLPDLIERLLRDASPIAANGRALEALPEETFVQPVGFLRQIIESIVKPRVAS
Sequences:
>Translated_379_residues MTRIAFFGHDAADAAVRRRVRSFQGDGFQVTGFMMRRREPLAQEWENVDLGQTQDGAFLQRIRQVFRGARIAAASGDRLR SADVIYARNLDMLACAFLAKRHAKLATPVIYECLDIHRLLCRTDIIGKGLRALEGWLLKRSKALVVSSPAFLSQHFERYY PGVANAYLVENRLAGQFDYGARQSPAKGQVDGHIRLGWVGNLRCRRSLDLLCALADQFGPRIEVKLHGVPALTEIPDFES KIAARNNMSYHGRYRSPEDLPEIYAGLDVVWSGDFMEAGLNSTWLLPNRIYEGGYYCVPPIAPAGTETARWIARHECGFL PGEPLEQTLPDLIERLLRDASPIAANGRALEALPEETFVQPVGFLRQIIESIVKPRVAS >Mature_378_residues TRIAFFGHDAADAAVRRRVRSFQGDGFQVTGFMMRRREPLAQEWENVDLGQTQDGAFLQRIRQVFRGARIAAASGDRLRS ADVIYARNLDMLACAFLAKRHAKLATPVIYECLDIHRLLCRTDIIGKGLRALEGWLLKRSKALVVSSPAFLSQHFERYYP GVANAYLVENRLAGQFDYGARQSPAKGQVDGHIRLGWVGNLRCRRSLDLLCALADQFGPRIEVKLHGVPALTEIPDFESK IAARNNMSYHGRYRSPEDLPEIYAGLDVVWSGDFMEAGLNSTWLLPNRIYEGGYYCVPPIAPAGTETARWIARHECGFLP GEPLEQTLPDLIERLLRDASPIAANGRALEALPEETFVQPVGFLRQIIESIVKPRVAS
Specific function: Essential for succinoglycan (EPS I) synthesis and nodule infection. Glycosyltransferase needed for the addition of the third sugar (glucose), catalyzes the formation of a beta-1,4 linkage between the second and third sugars [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42435; Mature: 42304
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRIAFFGHDAADAAVRRRVRSFQGDGFQVTGFMMRRREPLAQEWENVDLGQTQDGAFLQ CCEEEEECCCHHHHHHHHHHHHHCCCCEEEHHHHHHHCCHHHHHHCCCCCCCCCCCHHHH RIRQVFRGARIAAASGDRLRSADVIYARNLDMLACAFLAKRHAKLATPVIYECLDIHRLL HHHHHHCCCEEEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CRTDIIGKGLRALEGWLLKRSKALVVSSPAFLSQHFERYYPGVANAYLVENRLAGQFDYG HHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC ARQSPAKGQVDGHIRLGWVGNLRCRRSLDLLCALADQFGPRIEVKLHGVPALTEIPDFES CCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHH KIAARNNMSYHGRYRSPEDLPEIYAGLDVVWSGDFMEAGLNSTWLLPNRIYEGGYYCVPP HHHHHCCCCCCCCCCCHHHHHHHHCCCEEEECCCHHHCCCCCEEECCHHHCCCCCEECCC IAPAGTETARWIARHECGFLPGEPLEQTLPDLIERLLRDASPIAANGRALEALPEETFVQ CCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHH PVGFLRQIIESIVKPRVAS HHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TRIAFFGHDAADAAVRRRVRSFQGDGFQVTGFMMRRREPLAQEWENVDLGQTQDGAFLQ CEEEEECCCHHHHHHHHHHHHHCCCCEEEHHHHHHHCCHHHHHHCCCCCCCCCCCHHHH RIRQVFRGARIAAASGDRLRSADVIYARNLDMLACAFLAKRHAKLATPVIYECLDIHRLL HHHHHHCCCEEEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CRTDIIGKGLRALEGWLLKRSKALVVSSPAFLSQHFERYYPGVANAYLVENRLAGQFDYG HHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC ARQSPAKGQVDGHIRLGWVGNLRCRRSLDLLCALADQFGPRIEVKLHGVPALTEIPDFES CCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHH KIAARNNMSYHGRYRSPEDLPEIYAGLDVVWSGDFMEAGLNSTWLLPNRIYEGGYYCVPP HHHHHCCCCCCCCCCCHHHHHHHHCCCEEEECCCHHHCCCCCEEECCHHHCCCCCEECCC IAPAGTETARWIARHECGFLPGEPLEQTLPDLIERLLRDASPIAANGRALEALPEETFVQ CCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHH PVGFLRQIIESIVKPRVAS HHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8226645; 8479421; 11481431; 8246891 [H]