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The map label for this gene is pdhR [C]

Identifier: 114797275

GI number: 114797275

Start: 1696304

End: 1697125

Strand: Reverse

Name: pdhR [C]

Synonym: HNE_1655

Alternate gene names: 114797275

Gene position: 1697125-1696304 (Counterclockwise)

Preceding gene: 114799125

Following gene: 114798349

Centisome position: 45.81

GC content: 61.8

Gene sequence:

>822_bases
ATGCACAGCATTGGTTACGAGTCTGGACGGGGAATGAAACACACACTTACGGAAAACCAGCGGCCTGCTGGGCGCAATCC
CGTTGGGATGACCGCGCCTCGCAAGGACCGGGAAAAAGGCGCTCTGAAAGTCGCGCGCGAAATCGTGCGCCATATCTATG
AGGAACGCATTCCCCCCGGTCAGAAATACCTCTCGGAAGCTGACGCGCTCGAACGTTACCGCGTCGCCAGAGGCACGCTG
CGCGAAGCACTGCGCTATCTCCAGCTTCAGGGCGTCCTGAAAATCCGGACCGGCCCCAATGGCGGACACTTCGTCGCCAA
TCCGCAATGGGAAAACCTGGCCTCCACAATCGCCCTCCTGCTCCAGTTCTCGGAAGCCACCATTGAATCCCTCATCGAGT
CCCGCATTGCCATTGAACCGGGCATGGCCGCGCTCGCCGCCCAGCGTGCCACGCCCGATGACGTCCGGGAATTGAGCGAT
CTTCTGGACGAGCTCAAACTCAATCTCGGCGACTATGACGCCTTTTATCAGCTCTATCTGGAATTCTGGGACCAGCTGGC
CCTGACCGCCCGCAATCCGCTGTTCCTCTTTCTGCTACCCGCCTTGCGCCGCATCACCTGGACCTCGGGCATCCGGCCGA
ATGAAGCCCAGCGCGAAGCAGCGCTGGGCGGCCTCTGCACGCTTCGGGATTCTGTCGCGGCCAATGATCCTGCCGGCGCG
GCCAACGCCTTGCGGCGGCTGGAAGAGGCTTATCTGGCCACCATGCGGACAGAGTACCCACGCGAGCTTGCCAAGCGCGT
GGTCTGGCACGACCACAGCTAG

Upstream 100 bases:

>100_bases
ACCCGTGCACCGTCTCCGTAAAGGTTGACTGCCAGACCAAGGACGGCGCATTAACCATATTAGCCAAGGGGACGCTGCAC
TGCCTGGGAATACTCCCGGA

Downstream 100 bases:

>100_bases
GCCGGTCTATTTCCAGTTTTTGTCGCGCGATGTCCTGCCGATGCCGGGATTGAGCGTGTTCGTGGGATCAAGCTTCCGGT
AAAACGCCGCCAGCGCCGGC

Product: putative transcriptional regulator

Products: NA

Alternate protein names: GntR Domain-Containing Protein; GntR Domain Protein; Regulatory Protein GntR HTH; Transcriptional Regulator GntR Family; Transcriptional Regulator; GntR Transcriptional Regulators Family; GntR Family Regulatory Protein

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MHSIGYESGRGMKHTLTENQRPAGRNPVGMTAPRKDREKGALKVAREIVRHIYEERIPPGQKYLSEADALERYRVARGTL
REALRYLQLQGVLKIRTGPNGGHFVANPQWENLASTIALLLQFSEATIESLIESRIAIEPGMAALAAQRATPDDVRELSD
LLDELKLNLGDYDAFYQLYLEFWDQLALTARNPLFLFLLPALRRITWTSGIRPNEAQREAALGGLCTLRDSVAANDPAGA
ANALRRLEEAYLATMRTEYPRELAKRVVWHDHS

Sequences:

>Translated_273_residues
MHSIGYESGRGMKHTLTENQRPAGRNPVGMTAPRKDREKGALKVAREIVRHIYEERIPPGQKYLSEADALERYRVARGTL
REALRYLQLQGVLKIRTGPNGGHFVANPQWENLASTIALLLQFSEATIESLIESRIAIEPGMAALAAQRATPDDVRELSD
LLDELKLNLGDYDAFYQLYLEFWDQLALTARNPLFLFLLPALRRITWTSGIRPNEAQREAALGGLCTLRDSVAANDPAGA
ANALRRLEEAYLATMRTEYPRELAKRVVWHDHS
>Mature_273_residues
MHSIGYESGRGMKHTLTENQRPAGRNPVGMTAPRKDREKGALKVAREIVRHIYEERIPPGQKYLSEADALERYRVARGTL
REALRYLQLQGVLKIRTGPNGGHFVANPQWENLASTIALLLQFSEATIESLIESRIAIEPGMAALAAQRATPDDVRELSD
LLDELKLNLGDYDAFYQLYLEFWDQLALTARNPLFLFLLPALRRITWTSGIRPNEAQREAALGGLCTLRDSVAANDPAGA
ANALRRLEEAYLATMRTEYPRELAKRVVWHDHS

Specific function: Transcriptional Repressor For The Pyruvate Dehydrogenase Complex Genes ACEef And Lpd. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786303, Length=154, Percent_Identity=32.4675324675325, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30744; Mature: 30744

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSIGYESGRGMKHTLTENQRPAGRNPVGMTAPRKDREKGALKVAREIVRHIYEERIPPG
CCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCH
QKYLSEADALERYRVARGTLREALRYLQLQGVLKIRTGPNGGHFVANPQWENLASTIALL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCEECCCCHHHHHHHHHHH
LQFSEATIESLIESRIAIEPGMAALAAQRATPDDVRELSDLLDELKLNLGDYDAFYQLYL
HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
EFWDQLALTARNPLFLFLLPALRRITWTSGIRPNEAQREAALGGLCTLRDSVAANDPAGA
HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHH
ANALRRLEEAYLATMRTEYPRELAKRVVWHDHS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MHSIGYESGRGMKHTLTENQRPAGRNPVGMTAPRKDREKGALKVAREIVRHIYEERIPPG
CCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCH
QKYLSEADALERYRVARGTLREALRYLQLQGVLKIRTGPNGGHFVANPQWENLASTIALL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCEECCCCHHHHHHHHHHH
LQFSEATIESLIESRIAIEPGMAALAAQRATPDDVRELSDLLDELKLNLGDYDAFYQLYL
HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
EFWDQLALTARNPLFLFLLPALRRITWTSGIRPNEAQREAALGGLCTLRDSVAANDPAGA
HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHH
ANALRRLEEAYLATMRTEYPRELAKRVVWHDHS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA