| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is ilvE [H]
Identifier: 114797240
GI number: 114797240
Start: 2642924
End: 2643889
Strand: Direct
Name: ilvE [H]
Synonym: HNE_2507
Alternate gene names: 114797240
Gene position: 2642924-2643889 (Clockwise)
Preceding gene: 114798942
Following gene: 114799150
Centisome position: 71.33
GC content: 58.18
Gene sequence:
>966_bases ATGCTGACATTTCAAAAAGTGCTGACCGGATTTCAGACGCGGGCAGACGCTCGCGCAGAGCGAACAGACGCGTTCGCCGA CGGTATTGCCTGGATCGAAAACGAATTTGTGCCCATCGGAAAGGCGCGGATACCGATACTTGATCAGGGCTTCCTGCATT CGGATCTGACCTATGACGTCCCCGCAGTCTGGAATGGCCGGATCTTCCGTCTCGATGATCACCTGGACCGTCTGGAAGTT AGCTGCGCCAAAATGCGGCTCCCGCTGCCGATCGCCAGGCCAGAGCTCCGCAGGCTGGTGATGGAGCTGGTCTCCAGGAG TGGGCTGCGGGACGCATATGTTGAGATCATCGTGACCCGCGGGTTGAAGTTCCTGCGAGGCGCACAAGCCGAAGACATCA TCCCGAACCTGTATCTCATGGCGGTGCCTTACGTCTGGATTCTCCCGCTTGAATACCAGAACCATGGCGCGCCGGCCGTC GTAACGCGAACGGTGCGCCGCACACCCCCGGGGGCCCTGGACCCGACAATCAAGAACCTTCAGTGGGGCGATCTCGTCCG AGGGCTTATGGAAGCAGGTGACCGGGACTCTTTCTTCCCCATTCTTCCCGACGGCGACGGGAACGCCACAGAAGGCGCTG GCTATAATATCGTCCTTGTCAGGAATGGGGAACTTCACACACCCCGTCGCGGGGTGCTGGAAGGCATCACACGCAGGACA GTACTGGAAATAGCGGCCGCGCGCGGCCTGAAAACACATGTTACCGAGATACCCATCCAGGCACTCTATGAATGCGATGA ATTGTTCATGTGTTCGACGGCAGGCGGCATAATGCCACTCGTCCTTCTGGATGGGAACATTGTGGGTGATGGAACAGTCG GTCCGGTTACACGGATGATTTGGGAGGCTTACTGGGATCTTCATGATGATCCTCAGCTCAGCGAGCCTGTGACTTACGCG CCCTGA
Upstream 100 bases:
>100_bases ACGGGATCAAATCTACGAGCTTTTAGTCAATATTTATTGACTTTCTGGGCGCAGCAGTTTCGGATGATGTCGTGAAATGC AAAAACGACAGGGGACCGCA
Downstream 100 bases:
>100_bases GCGCAGCGCCAGCCGCGCCGGGCGCAGCTCCCCCTGCCCCCCCTACTCCGGATATCCAGATCAGCTGCTCGGATCTTCGC CGCGCGCATCCGTCATCTGG
Product: class IV aminotransferase
Products: NA
Alternate protein names: BCAT; Transaminase B [H]
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MLTFQKVLTGFQTRADARAERTDAFADGIAWIENEFVPIGKARIPILDQGFLHSDLTYDVPAVWNGRIFRLDDHLDRLEV SCAKMRLPLPIARPELRRLVMELVSRSGLRDAYVEIIVTRGLKFLRGAQAEDIIPNLYLMAVPYVWILPLEYQNHGAPAV VTRTVRRTPPGALDPTIKNLQWGDLVRGLMEAGDRDSFFPILPDGDGNATEGAGYNIVLVRNGELHTPRRGVLEGITRRT VLEIAAARGLKTHVTEIPIQALYECDELFMCSTAGGIMPLVLLDGNIVGDGTVGPVTRMIWEAYWDLHDDPQLSEPVTYA P
Sequences:
>Translated_321_residues MLTFQKVLTGFQTRADARAERTDAFADGIAWIENEFVPIGKARIPILDQGFLHSDLTYDVPAVWNGRIFRLDDHLDRLEV SCAKMRLPLPIARPELRRLVMELVSRSGLRDAYVEIIVTRGLKFLRGAQAEDIIPNLYLMAVPYVWILPLEYQNHGAPAV VTRTVRRTPPGALDPTIKNLQWGDLVRGLMEAGDRDSFFPILPDGDGNATEGAGYNIVLVRNGELHTPRRGVLEGITRRT VLEIAAARGLKTHVTEIPIQALYECDELFMCSTAGGIMPLVLLDGNIVGDGTVGPVTRMIWEAYWDLHDDPQLSEPVTYA P >Mature_321_residues MLTFQKVLTGFQTRADARAERTDAFADGIAWIENEFVPIGKARIPILDQGFLHSDLTYDVPAVWNGRIFRLDDHLDRLEV SCAKMRLPLPIARPELRRLVMELVSRSGLRDAYVEIIVTRGLKFLRGAQAEDIIPNLYLMAVPYVWILPLEYQNHGAPAV VTRTVRRTPPGALDPTIKNLQWGDLVRGLMEAGDRDSFFPILPDGDGNATEGAGYNIVLVRNGELHTPRRGVLEGITRRT VLEIAAARGLKTHVTEIPIQALYECDELFMCSTAGGIMPLVLLDGNIVGDGTVGPVTRMIWEAYWDLHDDPQLSEPVTYA P
Specific function: Acts on leucine, isoleucine and valine [H]
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Escherichia coli, GI48994963, Length=285, Percent_Identity=25.9649122807018, Blast_Score=93, Evalue=3e-20,
Paralogues:
None
Copy number: 2342 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 11,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005785 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.42 [H]
Molecular weight: Translated: 35779; Mature: 35779
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTFQKVLTGFQTRADARAERTDAFADGIAWIENEFVPIGKARIPILDQGFLHSDLTYDV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEECCCCCCCCCCCCC PAVWNGRIFRLDDHLDRLEVSCAKMRLPLPIARPELRRLVMELVSRSGLRDAYVEIIVTR CCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH GLKFLRGAQAEDIIPNLYLMAVPYVWILPLEYQNHGAPAVVTRTVRRTPPGALDPTIKNL HHHHHHCCCHHHHCCHHHHHHCCEEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCHHHCC QWGDLVRGLMEAGDRDSFFPILPDGDGNATEGAGYNIVLVRNGELHTPRRGVLEGITRRT CHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHH VLEIAAARGLKTHVTEIPIQALYECDELFMCSTAGGIMPLVLLDGNIVGDGTVGPVTRMI HHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCEEECCCCHHHHHHHH WEAYWDLHDDPQLSEPVTYAP HHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MLTFQKVLTGFQTRADARAERTDAFADGIAWIENEFVPIGKARIPILDQGFLHSDLTYDV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEECCCCCCCCCCCCC PAVWNGRIFRLDDHLDRLEVSCAKMRLPLPIARPELRRLVMELVSRSGLRDAYVEIIVTR CCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH GLKFLRGAQAEDIIPNLYLMAVPYVWILPLEYQNHGAPAVVTRTVRRTPPGALDPTIKNL HHHHHHCCCHHHHCCHHHHHHCCEEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCHHHCC QWGDLVRGLMEAGDRDSFFPILPDGDGNATEGAGYNIVLVRNGELHTPRRGVLEGITRRT CHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHH VLEIAAARGLKTHVTEIPIQALYECDELFMCSTAGGIMPLVLLDGNIVGDGTVGPVTRMI HHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCEEECCCCHHHHHHHH WEAYWDLHDDPQLSEPVTYAP HHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]