| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
Click here to switch to the map view.
The map label for this gene is pmi [H]
Identifier: 114797227
GI number: 114797227
Start: 793956
End: 795161
Strand: Reverse
Name: pmi [H]
Synonym: HNE_0782
Alternate gene names: 114797227
Gene position: 795161-793956 (Counterclockwise)
Preceding gene: 114800368
Following gene: 114799213
Centisome position: 21.46
GC content: 57.13
Gene sequence:
>1206_bases ATGATAGAAGCCTTTAAAGTGCCCCATCGGACAGCCGCCTCCTCTGCAGTCGAAAAGGTGCGGAGCTGGGTTCTGGATGA GGCGATGCCATTGTGGGTCCGGCATGGGATCAACTCAACGCATGGCGGACCGGTCGAAGTTTTCGCTCTGGACGATGATC CACAGCCCCTCGCCGCCCCGATGCGCACCCGGGTGACCGGTCGGCAACTCTACGCCTTCAGCCATGCTCACCTGATGGGC GTACCGGACAGTCTTGCCGCAGCCGACCAGATGTTTGATTTTCTGAGGCGCCGTATCTGGCTCGGCGCGGAAAAAGGTTG GTGCAGGACCTTATCCTCCGCTGGCCAGCCGCTGGACCTCCAGCCGGATCTCTACGATTTCAGCTTCTGTCTCTTTGGGC TGGCGTGGTATTATGAAGCAACTGGCAGTGCCCAAGCGCTTAGCCTGGCGCTCCAGACTCTTGAGATCGTCGAGCGCGAT TTCCGGCATCCGTCGGGAATGGGATACCACAATGCGCTTCCAGGCATGCTCCCCCGTCAGCAAAACCCTCATATGCATCT GTTGGAAGCTGTCTTGAAACTTAATGCTGTGGCGCCCAGCCAACAGCTGTCATCGCTCGCTTCAGAGCTCGTCGCTCTGT TTTCGGACAAATTTTTCAGTTGCGAGTACGACTGCCTGCCCGAATTCTTTACATCCGACCTTGAGCCTCTTCGCGAGGCG ACAGGCTGTTTTCGTTTTGAGCCGGGCCACCAATTCGAATGGGCCTGGATACTGGCGCAACATCAGAAGCAGTCAGGAGC TGATCACAGCGACCTTATCCGCCGCCTTGTGGCGGGGGCTGAACAGTTGGGCGTCAGCCAAACGAGCGGGCTCACATTTA ATGCTGTAGCCACCAACGGCGCTGTGCTTGATCCCGGCTCACGAACCTGGCCGAACACGGAACGGATTAAAGGATGGCTC GGCCTTTCCGAAGTTACAGGTGAAGATCCCTGGAAGAAGGTGGAGAGCGCCTGCGACACCCTTTTCAAATATCATCTGGG ACCTGGTGCCCCCCGCGGACTGTGGCATGATACAATCTCAGAGCAAGGACTGGCGATCACAGACACAGTGCCCGCATCCA CACTTTATCATCTGTTGCTGGCATTCAGCGAGATCCTAAGGCTTTATCCGGCTCAGGAAAACTCCACGCGCTCCTGCGAG AAGTAA
Upstream 100 bases:
>100_bases GATAGCATGCTTGGCTCGATTCCCTTCGGACGCGGCTGCTTACAATGACTATGGCGGCCAGAGCTTTCTCCTGGCCGACG CGCCTGGGAGGTCCCGCCCC
Downstream 100 bases:
>100_bases AACAGCGAACGGGTCTCGTCATCAATCGTCGAGGCATCGACATGCAACAGCTTGCGCATCGCATTCTTGCGATCCTTCAG CGCATGCTCGAAATCCCCCT
Product: N-acylglucosamine 2-epimerase
Products: NA
Alternate protein names: Phosphohexomutase; Phosphomannose isomerase; PMI [H]
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MIEAFKVPHRTAASSAVEKVRSWVLDEAMPLWVRHGINSTHGGPVEVFALDDDPQPLAAPMRTRVTGRQLYAFSHAHLMG VPDSLAAADQMFDFLRRRIWLGAEKGWCRTLSSAGQPLDLQPDLYDFSFCLFGLAWYYEATGSAQALSLALQTLEIVERD FRHPSGMGYHNALPGMLPRQQNPHMHLLEAVLKLNAVAPSQQLSSLASELVALFSDKFFSCEYDCLPEFFTSDLEPLREA TGCFRFEPGHQFEWAWILAQHQKQSGADHSDLIRRLVAGAEQLGVSQTSGLTFNAVATNGAVLDPGSRTWPNTERIKGWL GLSEVTGEDPWKKVESACDTLFKYHLGPGAPRGLWHDTISEQGLAITDTVPASTLYHLLLAFSEILRLYPAQENSTRSCE K
Sequences:
>Translated_401_residues MIEAFKVPHRTAASSAVEKVRSWVLDEAMPLWVRHGINSTHGGPVEVFALDDDPQPLAAPMRTRVTGRQLYAFSHAHLMG VPDSLAAADQMFDFLRRRIWLGAEKGWCRTLSSAGQPLDLQPDLYDFSFCLFGLAWYYEATGSAQALSLALQTLEIVERD FRHPSGMGYHNALPGMLPRQQNPHMHLLEAVLKLNAVAPSQQLSSLASELVALFSDKFFSCEYDCLPEFFTSDLEPLREA TGCFRFEPGHQFEWAWILAQHQKQSGADHSDLIRRLVAGAEQLGVSQTSGLTFNAVATNGAVLDPGSRTWPNTERIKGWL GLSEVTGEDPWKKVESACDTLFKYHLGPGAPRGLWHDTISEQGLAITDTVPASTLYHLLLAFSEILRLYPAQENSTRSCE K >Mature_401_residues MIEAFKVPHRTAASSAVEKVRSWVLDEAMPLWVRHGINSTHGGPVEVFALDDDPQPLAAPMRTRVTGRQLYAFSHAHLMG VPDSLAAADQMFDFLRRRIWLGAEKGWCRTLSSAGQPLDLQPDLYDFSFCLFGLAWYYEATGSAQALSLALQTLEIVERD FRHPSGMGYHNALPGMLPRQQNPHMHLLEAVLKLNAVAPSQQLSSLASELVALFSDKFFSCEYDCLPEFFTSDLEPLREA TGCFRFEPGHQFEWAWILAQHQKQSGADHSDLIRRLVAGAEQLGVSQTSGLTFNAVATNGAVLDPGSRTWPNTERIKGWL GLSEVTGEDPWKKVESACDTLFKYHLGPGAPRGLWHDTISEQGLAITDTVPASTLYHLLLAFSEILRLYPAQENSTRSCE K
Specific function: Unknown
COG id: COG2942
COG function: function code G; N-acyl-D-glucosamine 2-epimerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N-acylglucosamine 2-epimerase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR010819 [H]
Pfam domain/function: PF07221 GlcNAc_2-epim [H]
EC number: =5.3.1.8 [H]
Molecular weight: Translated: 44583; Mature: 44583
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEAFKVPHRTAASSAVEKVRSWVLDEAMPLWVRHGINSTHGGPVEVFALDDDPQPLAAP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHH MRTRVTGRQLYAFSHAHLMGVPDSLAAADQMFDFLRRRIWLGAEKGWCRTLSSAGQPLDL HHHHHCHHHHHEECCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCC QPDLYDFSFCLFGLAWYYEATGSAQALSLALQTLEIVERDFRHPSGMGYHNALPGMLPRQ CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCC QNPHMHLLEAVLKLNAVAPSQQLSSLASELVALFSDKFFSCEYDCLPEFFTSDLEPLREA CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH TGCFRFEPGHQFEWAWILAQHQKQSGADHSDLIRRLVAGAEQLGVSQTSGLTFNAVATNG HCCEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC AVLDPGSRTWPNTERIKGWLGLSEVTGEDPWKKVESACDTLFKYHLGPGAPRGLWHDTIS EEECCCCCCCCCHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHC EQGLAITDTVPASTLYHLLLAFSEILRLYPAQENSTRSCEK CCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MIEAFKVPHRTAASSAVEKVRSWVLDEAMPLWVRHGINSTHGGPVEVFALDDDPQPLAAP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHH MRTRVTGRQLYAFSHAHLMGVPDSLAAADQMFDFLRRRIWLGAEKGWCRTLSSAGQPLDL HHHHHCHHHHHEECCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCC QPDLYDFSFCLFGLAWYYEATGSAQALSLALQTLEIVERDFRHPSGMGYHNALPGMLPRQ CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCC QNPHMHLLEAVLKLNAVAPSQQLSSLASELVALFSDKFFSCEYDCLPEFFTSDLEPLREA CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH TGCFRFEPGHQFEWAWILAQHQKQSGADHSDLIRRLVAGAEQLGVSQTSGLTFNAVATNG HCCEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC AVLDPGSRTWPNTERIKGWLGLSEVTGEDPWKKVESACDTLFKYHLGPGAPRGLWHDTIS EEECCCCCCCCCHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHC EQGLAITDTVPASTLYHLLLAFSEILRLYPAQENSTRSCEK CCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1452036; 11481430 [H]