| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114797119
Identifier: 114797119
GI number: 114797119
Start: 1662962
End: 1663810
Strand: Direct
Name: 114797119
Synonym: HNE_1626
Alternate gene names: NA
Gene position: 1662962-1663810 (Clockwise)
Preceding gene: 114797403
Following gene: 114798105
Centisome position: 44.88
GC content: 63.37
Gene sequence:
>849_bases ATGAGCAAGTCATACAGAGCCTGGACCGGGTTGGGCCTTGGCCTGGCAATGATCTCTACCGGACTGGGCGCCTGCGGAAA GGCCGAAGCCCCTGCGGCGGATGCGCCCGCCGCGGCGACTGAGCAGACCGCAGAAGCGCCCGCCGACGTCGCATTTGAAG AGGCCGTCGAGGCCGTGGCGGCAGGCGGTGAAGGGGAGGGCGGTATCTCTCTGGCCCAGGCTGCGACCGACCCTGTCATC TATGGCTCTGCGCTGGCCGTTACCGAAGCTCACATTATCGCCGCCCGCGACGCTTATGCCCTCGGCGAAACTGACGCTGC AGCTGAAATGTTCGCCCACCCGGTCAGCGAAGTTCTGATCGAGCTGGAAGACCTGTTCAATGCGCGGGGGGTGACGCTGT TTGATGGCCTTCTGCTGGAGGCCTCCCAGGCGGCGATGTCTGGTGAAAGCGCTGAGCAGATCAGCGCCCGTGCAGACGCC ATCATTGCTGCCTTGCGTGCCGCAGCAACCAAAGCGCCTGAATCGAGCCGCAGCCCGGTGTCCGTTCGCGCGGCCGTCGC AGCAGACCAGGCGGATCGCGCCGCCACGATGTACCGGATTGCGCGTGAAGCAGGGACTTATGAACCGTATCTGGATGGTT ATGGCTTCCATAAAGCGGGCCTGGCGTTGTTCCAGGAACAGGAAGCAGAGATTGCTGCGGCCAATCCCGCAGGAGCTGCC GCGCTGACCGAGGCCTTTGCCGAACTTGCAAAAGCTTATCCGGACGCCGGGCGCCAGGCGGAGCTGAACGCTGATCTTTC GGCAATGACCGTATCTGCTTCAAACGCTGTGTTGGCCAACAGCCACTGA
Upstream 100 bases:
>100_bases ATCATGTGCGACCTTCTACGTGCCCGCCCTTGCAGGCACGGCATCTTTGCTTTAACTGCAACTCATTCTCAAACACAAAC AGCATATTCGGAGTGCATAG
Downstream 100 bases:
>100_bases GGCAAGCAAGACACTTTGAAAGAATAAAAGGCAGGCCGGGTTCGCCCGGCCTGTTTTATTTGGCGCCGTAATAGTTGCAG AGCGTATCGATGATCGCCTG
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MSKSYRAWTGLGLGLAMISTGLGACGKAEAPAADAPAAATEQTAEAPADVAFEEAVEAVAAGGEGEGGISLAQAATDPVI YGSALAVTEAHIIAARDAYALGETDAAAEMFAHPVSEVLIELEDLFNARGVTLFDGLLLEASQAAMSGESAEQISARADA IIAALRAAATKAPESSRSPVSVRAAVAADQADRAATMYRIAREAGTYEPYLDGYGFHKAGLALFQEQEAEIAAANPAGAA ALTEAFAELAKAYPDAGRQAELNADLSAMTVSASNAVLANSH
Sequences:
>Translated_282_residues MSKSYRAWTGLGLGLAMISTGLGACGKAEAPAADAPAAATEQTAEAPADVAFEEAVEAVAAGGEGEGGISLAQAATDPVI YGSALAVTEAHIIAARDAYALGETDAAAEMFAHPVSEVLIELEDLFNARGVTLFDGLLLEASQAAMSGESAEQISARADA IIAALRAAATKAPESSRSPVSVRAAVAADQADRAATMYRIAREAGTYEPYLDGYGFHKAGLALFQEQEAEIAAANPAGAA ALTEAFAELAKAYPDAGRQAELNADLSAMTVSASNAVLANSH >Mature_281_residues SKSYRAWTGLGLGLAMISTGLGACGKAEAPAADAPAAATEQTAEAPADVAFEEAVEAVAAGGEGEGGISLAQAATDPVIY GSALAVTEAHIIAARDAYALGETDAAAEMFAHPVSEVLIELEDLFNARGVTLFDGLLLEASQAAMSGESAEQISARADAI IAALRAAATKAPESSRSPVSVRAAVAADQADRAATMYRIAREAGTYEPYLDGYGFHKAGLALFQEQEAEIAAANPAGAAA LTEAFAELAKAYPDAGRQAELNADLSAMTVSASNAVLANSH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28504; Mature: 28373
Theoretical pI: Translated: 4.07; Mature: 4.07
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKSYRAWTGLGLGLAMISTGLGACGKAEAPAADAPAAATEQTAEAPADVAFEEAVEAVA CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHH AGGEGEGGISLAQAATDPVIYGSALAVTEAHIIAARDAYALGETDAAAEMFAHPVSEVLI CCCCCCCCEEHHHHCCCCEEECCHHHHHHHHHEEECCCHHCCCCHHHHHHHHHHHHHHHH ELEDLFNARGVTLFDGLLLEASQAAMSGESAEQISARADAIIAALRAAATKAPESSRSPV HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC SVRAAVAADQADRAATMYRIAREAGTYEPYLDGYGFHKAGLALFQEQEAEIAAANPAGAA EEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCHH ALTEAFAELAKAYPDAGRQAELNADLSAMTVSASNAVLANSH HHHHHHHHHHHHCCCCCCCEECCCCCEEEEEECCCEEEECCC >Mature Secondary Structure SKSYRAWTGLGLGLAMISTGLGACGKAEAPAADAPAAATEQTAEAPADVAFEEAVEAVA CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHH AGGEGEGGISLAQAATDPVIYGSALAVTEAHIIAARDAYALGETDAAAEMFAHPVSEVLI CCCCCCCCEEHHHHCCCCEEECCHHHHHHHHHEEECCCHHCCCCHHHHHHHHHHHHHHHH ELEDLFNARGVTLFDGLLLEASQAAMSGESAEQISARADAIIAALRAAATKAPESSRSPV HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC SVRAAVAADQADRAATMYRIAREAGTYEPYLDGYGFHKAGLALFQEQEAEIAAANPAGAA EEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCHH ALTEAFAELAKAYPDAGRQAELNADLSAMTVSASNAVLANSH HHHHHHHHHHHHCCCCCCCEECCCCCEEEEEECCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA