| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
Click here to switch to the map view.
The map label for this gene is 114797065
Identifier: 114797065
GI number: 114797065
Start: 3020155
End: 3021051
Strand: Direct
Name: 114797065
Synonym: HNE_2863
Alternate gene names: NA
Gene position: 3020155-3021051 (Clockwise)
Preceding gene: 114800263
Following gene: 114799225
Centisome position: 81.52
GC content: 59.98
Gene sequence:
>897_bases TTGAAATCCCGCCGCCTGCGCCGCCCGGCGGATGCGCTTGCGCGCGCCTGCCCGTACAAAGAAGCGCAGCGCGATCAGCG CGATCAGAACCGCCAGCCCCCCATAAGCCAGCATCGGGGCAAGCGTATAACTCTGATCACCGCCCATCAGATCGGCAAAT TGCGTATCCCAATAGGATGGCAGAAAAGCCCCCGCGAGTATCGTCAGAAGCGCCAGCGCGACCAGGATGGTCCCCCATGC GCCGGCAAGCCACGCGCGCCTGGCAGCGTTCAACGCTTCAAGCGCAACATACTCCTCTTTCGCCGTATCGATCAGACCTG GCAGGTGGATGACATCCCGCACGACTTTCTGCCCGTCGTCCCCGATCTCTTCGCCCAGAGCGCTGCGCAGGCTTTCCACC CCGTTCTGAAGGTCGAGAAAAATGCGGCGGTCTTCCAGGCCCGGCAGGTCGCTTTCGTCAAAACGCTCCAGATCCATCGA CAGAAGTGTCGCCTGAAGATAGCGGAACCGCGCGCCGGCATCGCTCGCCTCGCGCAGCTTCTCGTACTGCTTGATGAAGC CATAAACCTGATCGATGGCGCGCTGTTGGGAGTAGGCCTGTTCGCGGGCCAGCATGATGTCCCGGTTGAGCTGCGATTCC ATCCGGCTCAGGCGGCTGTTGGTCGACGAAACCTCAAGATATGTGAGCGTATTCACAACGGTATTGAGCGAATCGTATTT GCTCATGAGCCCCCCTTATCTGGCCAGGTCCGCCAGTTCATGCTGCTTCACGACAGTTGGGTTTTAAGCACCATGTCCGC GATGTCAAAACATCAACCGTCCCAACAGCTTGCGGGCACAAAAAAGGCCCGGAGCCGCAGGGCAGCTCCGGGCCTTCTCA AATCAGTGCCCCATTGA
Upstream 100 bases:
>100_bases AGGCATAGGGGCCGGAATCGGCACCGAGGTGCCGCATCTGGGTCACGAGGCTCAGAAACCGGGTCTTTGACGCGCCCGCC CCCTTCATCGGCAAAACGCC
Downstream 100 bases:
>100_bases GGGGAAAGAGATCAGCTCTTGGCTTCAGCGAGGTCGATCGCCACGCCGGTGCCCATCGTCGAAGACAGGGTCACCTTGCG CACGAATGTGCCTTTTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MKSRRLRRPADALARACPYKEAQRDQRDQNRQPPISQHRGKRITLITAHQIGKLRIPIGWQKSPREYRQKRQRDQDGPPC AGKPRAPGSVQRFKRNILLFRRIDQTWQVDDIPHDFLPVVPDLFAQSAAQAFHPVLKVEKNAAVFQARQVAFVKTLQIHR QKCRLKIAEPRAGIARLAQLLVLLDEAINLIDGALLGVGLFAGQHDVPVELRFHPAQAAVGRRNLKICERIHNGIERIVF AHEPPLSGQVRQFMLLHDSWVLSTMSAMSKHQPSQQLAGTKKARSRRAAPGLLKSVPH
Sequences:
>Translated_298_residues MKSRRLRRPADALARACPYKEAQRDQRDQNRQPPISQHRGKRITLITAHQIGKLRIPIGWQKSPREYRQKRQRDQDGPPC AGKPRAPGSVQRFKRNILLFRRIDQTWQVDDIPHDFLPVVPDLFAQSAAQAFHPVLKVEKNAAVFQARQVAFVKTLQIHR QKCRLKIAEPRAGIARLAQLLVLLDEAINLIDGALLGVGLFAGQHDVPVELRFHPAQAAVGRRNLKICERIHNGIERIVF AHEPPLSGQVRQFMLLHDSWVLSTMSAMSKHQPSQQLAGTKKARSRRAAPGLLKSVPH >Mature_298_residues MKSRRLRRPADALARACPYKEAQRDQRDQNRQPPISQHRGKRITLITAHQIGKLRIPIGWQKSPREYRQKRQRDQDGPPC AGKPRAPGSVQRFKRNILLFRRIDQTWQVDDIPHDFLPVVPDLFAQSAAQAFHPVLKVEKNAAVFQARQVAFVKTLQIHR QKCRLKIAEPRAGIARLAQLLVLLDEAINLIDGALLGVGLFAGQHDVPVELRFHPAQAAVGRRNLKICERIHNGIERIVF AHEPPLSGQVRQFMLLHDSWVLSTMSAMSKHQPSQQLAGTKKARSRRAAPGLLKSVPH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33806; Mature: 33806
Theoretical pI: Translated: 11.80; Mature: 11.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSRRLRRPADALARACPYKEAQRDQRDQNRQPPISQHRGKRITLITAHQIGKLRIPIGW CCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHCCCEEEEEEECCCCEEEECCCC QKSPREYRQKRQRDQDGPPCAGKPRAPGSVQRFKRNILLFRRIDQTWQVDDIPHDFLPVV CCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH PDLFAQSAAQAFHPVLKVEKNAAVFQARQVAFVKTLQIHRQKCRLKIAEPRAGIARLAQL HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCEEECCCCHHHHHHHHH LVLLDEAINLIDGALLGVGLFAGQHDVPVELRFHPAQAAVGRRNLKICERIHNGIERIVF HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHCCCHHHHHHHHHHHHHHEEC AHEPPLSGQVRQFMLLHDSWVLSTMSAMSKHQPSQQLAGTKKARSRRAAPGLLKSVPH CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHCCCC >Mature Secondary Structure MKSRRLRRPADALARACPYKEAQRDQRDQNRQPPISQHRGKRITLITAHQIGKLRIPIGW CCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHCCCEEEEEEECCCCEEEECCCC QKSPREYRQKRQRDQDGPPCAGKPRAPGSVQRFKRNILLFRRIDQTWQVDDIPHDFLPVV CCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH PDLFAQSAAQAFHPVLKVEKNAAVFQARQVAFVKTLQIHRQKCRLKIAEPRAGIARLAQL HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCEEECCCCHHHHHHHHH LVLLDEAINLIDGALLGVGLFAGQHDVPVELRFHPAQAAVGRRNLKICERIHNGIERIVF HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHCCCHHHHHHHHHHHHHHEEC AHEPPLSGQVRQFMLLHDSWVLSTMSAMSKHQPSQQLAGTKKARSRRAAPGLLKSVPH CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA