| Definition | Syntrophomonas wolfei subsp. wolfei str. Goettingen chromosome, complete genome. |
|---|---|
| Accession | NC_008346 |
| Length | 2,936,195 |
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Identifier: 114565845
GI number:
Start: 322884
End: 325001
Strand: Direct
Name: Not Available
Synonym: Swol_0280
Alternate gene names: NA
Gene position: NA
Preceding gene: 114565844
Following gene: 114565846
Centisome position: NA
GC content: NA
Gene sequence:
>2118_bases ATGATAAATAGGGATAGCATACTCGATTGTATGCACAAAGAAAGCTACAAGCCGTTGAGTTACCATGAACTAAAAGCGGT TTTTGGCATCAAAGATGTCGATGAAGACATTAAATTCAGCAAGATCGTGGGGAAACTGGAGAAAGAGGGAGAGATCGTTA AAACCCGGGCCGGAAAATTTGGCCTGCCGGAAATGATGAACCTGGTCAAAGGGATAATCCATATCAGCAAAAAGGGCTTT GGCGTTTTAGTACCTGATAAAGCAGGCCTTGGAGAGGTATTTGTCTACGGCAAGAAGCTCAACGGGGCTATGCATAATGA CCGGGTGATGGTAAGGATACAGGAAAAGGGATATAATGGTCAGCGACCAGAGGGTACGGTCATCAGAATCCTGGCCCGCA ATACCCGGGAACTGGTTGGGACCTTTACCAAAGGCCGCCACCTGCTGCAGGTGGTTCCGGATGATTCCCGGCAGATTTAC CCTATCTATGTTAAAGCCTCGCGTAAATGGAAAGCCAAAGAAGGAGACAAGGTATTGGTCAGGATCAGCTCCTGGCCTGA ACGGGACAAGGTGGCTGAGGGTAAAATCGTGGAAGTGTTGGGACGCAAGGGAGAAGCGGGTGTTGATCTTAAAGTTTTGG CCAAAAAACATGGTCTGCGCCTGGAGTTTCCCGACAATGTGATGGAAGAAGCTCGTAATGTAGCCGTTGAGGTCAATGCG GAAGAGATATCCCGGCGCCGCGACTTGCGGGAATGGCGTATGGTCACCATTGATGGTGAAGATGCCAAGGATCTGGATGA TGCTGTTTCCATTGAAAAAACTTCGAAAGGCTACAAGCTGGGGGTGCATATTGCTGATGTCTCCCATTATGTTAAAGAAG ACTGCAAGTTGGACCGGGAAGCCTTTAAGCGCGGCACCAGTGTTTACCTGATAGATAAAGTTCTGCCCATGCTGCCGGTG GAATTATCCAATAATATTTGCAGCCTCAATCCTCAGGTCGAGCGCCTGGCTATAAGCTGTATAATGGATATTGATTCCTG GGGACAGGTAGTGGATTACGAGATCGTAAAGTCGGTAATCCAGATAAATGAACGCATGACTTACAGTGATGTAAACCGTA TTCTGGCCGATAATCCCCCGGCTTTAAAGGAGCGCTACGGGGAACTGGTAGAGGATTTCTTCCTGATGAAAGAACTATCT GATATCCTGCGCCGTTCCCGCTTAAATCGGGGGATGCTGGATTTTGATTTCCCCGAAAGCAAGGTGATAGTAGACGAAGA GGGTTTTCCCCTGGAAGTCAAAAGAGCCGAGCGCGGTCCGGGTGAAATGCTGATAGAAGATTTTATGATAAAAGCCAATG AAGTGGTAGCGGAACACCTGCATAATCTGGGGCTTCCCGTCTTGTATCGGGTCCATGAAAAACCGGATGAAGAAGCTATA AGCGAGTTAAACAAGGTGTTGGCGGTATTTGGGCATAAGATAAAAGGACATAAAGTCAGCCCCATGCTTTTTCAAGGGAT ACTGGCTGACATTAAAGGCCAGCCGGAGGAGCAAATGATTTCCTTGATGATTTTACGCTCCATGAAACATGCTTCCTATC TGCCCGAGCCCCGGGGTCATTTTGGTCTGGCTTCCCCCTACTACTGCCATTTTACCAGTCCTATCCGGCGTTATCCCGAC CTTATAGTTCACCGGGTGCTCAGCAGCCTTTTGGATGGGGGTATGACTACCCGTAAGAAGAGCAGCCTGGAAAAGAAGAT GACTATTTATGGAGAACAATCCAGCCTGCAGGAGATGAAAGCCGAGGAGGCGGAAAGAGAGCTCCTGGATGTGAAAAAGG CCCAATATATGTCCCAGTTTGTAGGTGATGAATTCTCAGCTCGCATCTCTTCCGTGCAAGCCTTTGGTTTTTTTGTAGCC CTGGAAAACACCGTAGAGGGTCTGGTGCATATCTCCAGCATAGCTGATGATTACTACCTGTTTAGTGATCGTACCTATAC TCTGCGTGGCCGGCATAGCGGGAGAAAATTTGCTATCGGCGATCAAGTTCGGGTGCAACTGGTTAGAGTGGATGTGGATG AAGGCAAGATCGATTTTGAATTGCTCCAGGATGAGTAA
Upstream 100 bases:
>100_bases ACGCCAGCTCGGGAGGGAAGGCGGTGCAGAATTCAGGAAAAAAAGCAGGATTATCGAGTCGGCAACTTTAGAAAAAACAC CAGGAGGAATAAATGAATAT
Downstream 100 bases:
>100_bases AAGCGTTTCACCTCCCATACCTACTAACTTTTTTCATCCCGGCACTCAGAAACGATAATGCTTAATAGACATATCGAGGT TTGGCTGAGTGCCAGGGAGT
Product: exoribonuclease II
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>705_residues MINRDSILDCMHKESYKPLSYHELKAVFGIKDVDEDIKFSKIVGKLEKEGEIVKTRAGKFGLPEMMNLVKGIIHISKKGF GVLVPDKAGLGEVFVYGKKLNGAMHNDRVMVRIQEKGYNGQRPEGTVIRILARNTRELVGTFTKGRHLLQVVPDDSRQIY PIYVKASRKWKAKEGDKVLVRISSWPERDKVAEGKIVEVLGRKGEAGVDLKVLAKKHGLRLEFPDNVMEEARNVAVEVNA EEISRRRDLREWRMVTIDGEDAKDLDDAVSIEKTSKGYKLGVHIADVSHYVKEDCKLDREAFKRGTSVYLIDKVLPMLPV ELSNNICSLNPQVERLAISCIMDIDSWGQVVDYEIVKSVIQINERMTYSDVNRILADNPPALKERYGELVEDFFLMKELS DILRRSRLNRGMLDFDFPESKVIVDEEGFPLEVKRAERGPGEMLIEDFMIKANEVVAEHLHNLGLPVLYRVHEKPDEEAI SELNKVLAVFGHKIKGHKVSPMLFQGILADIKGQPEEQMISLMILRSMKHASYLPEPRGHFGLASPYYCHFTSPIRRYPD LIVHRVLSSLLDGGMTTRKKSSLEKKMTIYGEQSSLQEMKAEEAERELLDVKKAQYMSQFVGDEFSARISSVQAFGFFVA LENTVEGLVHISSIADDYYLFSDRTYTLRGRHSGRKFAIGDQVRVQLVRVDVDEGKIDFELLQDE
Sequences:
NA
Specific function: NA
COG id: COG0557
COG function: function code K; Exoribonuclease R
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA