| Definition | Shewanella frigidimarina NCIMB 400, complete genome. |
|---|---|
| Accession | NC_008345 |
| Length | 4,845,257 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 114564903
GI number:
Start: 4458563
End: 4460233
Strand: Reverse
Name: Not Available
Synonym: Sfri_3751
Alternate gene names: NA
Gene position: NA
Preceding gene: 114564904
Following gene: 114564902
Centisome position: NA
GC content: NA
Gene sequence:
>1671_bases ATGAATGTGATTAGATATGTTACTCCTCTGATGTCGCTGTGCTTAGTTGCTTGCCAAACGACAGATAGACCCGACCCACA AACAGCGAAAGCGGCTTTGAATGAGTCAAGGCAGCAAGCTGAGGCGAGTCAAGCCATTACGCCACCTCCAGCGGCAATGC CTGAAGATGTTCAGCGCGAGCTTAATGGTAATAATGTGTTGAGCCAATCAGCAAGAGCGTTGCCTGCCGAGCGTCGTTTT GATGTATCAGCCAATGAAGTTGATGCGAGAGTTTTTTTCCCCAGCTTAGTAAAAGACACTCCATTGAGTGTCGCGGTACA TCCTGATGTACAAGGTAAAATTTCTCTATCTTTAAAGGCAGTAACTTTGTCTGAAGCCATTCAAGTTGTTGAAGACATTT ATGGATACGAAGTGAATCGAGAAGGTCGTATTTTACGTGTATTCCCGTCGGGTATGAGAACCGAAACTTTCCCCTTGAAT TATATCTACATGCAACGTGAAGGGTTGTCATTAACCTCCGTTAGCTCAGGGCGCATTTCAGACCAAAACAATAATTCAAG CAATGGCAGTAACAATAGTAATAGCAACAGCAGTAACAGTAGTTCGAATAGTAATAGTAGCAATGGAAATTCGAACAGCA GTGACAATACCAATGGTACGTTTATTCGTTCAACAACCAAGACAGATTTTTGGGGCGAGCTACAAGCCACATTAATGTCA ATCATGGGTGAAACAGGTGGCGGACGACAAGTTGTGGTAACCCCTCAAGCTGGGCTTGTTACTGTTCGAGCTTTCCCTGA TGAGTTACGTCAAATTCGAAGTTTCTTACAAATAGCCGAAAGCCATCTACAGCGCCAAGTGATTTTGGAAGCGAAAATTA TAGAAGTCACTTTATCTGATGGTTACCAACAAGGGATCCAGTGGGAAAATGTCCTAGGTCATGCAGGCAGTACCAACATT GATTTCAGCACTTCTGCAGGACAAGGGTTAAGTAATGCGATTACGTCTGCAATTGGCGGTGTAACCTCGATTAATTTCAC CGGAAGTGATTTCAGCACCATTATTAACTTGCTCGATACCCAAGGTGATGTTGATGTACTTTCAAGCCCTCGTGTTACCG CTTCTAATAACCAAAAAGCGGTAATTAAGGTGGGCAATGACGAATACTTTGTTACCGATGTATCCTCAACGACTGTAGCG GGTACCACTCCGGTAACGACGCCGCAGGTTGAACTAACGCCATTTTTCTCTGGTATTGCGTTAGATGTAACCCCGCAGAT TGATGAATATGGCAATGTAATATTGCATGTTCATCCGTCGGTAATCGATGTGACCTCACAAACTAAAGAAATTAAAATTA GTGATTCAACATTAGAACTGCCTCTTGCTCAAAGTGAGATCCGTGAGTCGGATACCGTTATCCGCGCTGCATCAGGTGAT GTGGTTGTTATTGGTGGCTTAATGAAGAGTGAGAACATTGAAACTGTATCAAAAGTACCGTTATTAGGTGACATTCCTTT TCTGGGGGAAGCGTTTACCAGCCGTACTAAATCTAAAAAGAAAACTGAATTGATTATTATGTTGAAACCGACTGTTGTTG GTGGAGACACATGGAAGGATGAATTAAAGCGTTCACAAGATTTAATCGAGCGTTGGTATCCTTCTAAATAG
Upstream 100 bases:
>100_bases TTACGAGTATCAAAGATTAGCAAGGATTATGTAATCTTGTCAGATGGAAGAAAACTTCAGCTATTTCAGTCGATAACAGA GCGATAGGATAAGAATAAAA
Downstream 100 bases:
>100_bases CGACCGTTGGCGGTAGATAATTGACGATTAAAAATAGCGGTCGAAATTGATAAGGGATAGCCAGTAATTATGTATTTGCA GCATTTTGGCTTAAGTCAGT
Product: pilus (MSHA type) biogenesis protein MshL
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>556_residues MNVIRYVTPLMSLCLVACQTTDRPDPQTAKAALNESRQQAEASQAITPPPAAMPEDVQRELNGNNVLSQSARALPAERRF DVSANEVDARVFFPSLVKDTPLSVAVHPDVQGKISLSLKAVTLSEAIQVVEDIYGYEVNREGRILRVFPSGMRTETFPLN YIYMQREGLSLTSVSSGRISDQNNNSSNGSNNSNSNSSNSSSNSNSSNGNSNSSDNTNGTFIRSTTKTDFWGELQATLMS IMGETGGGRQVVVTPQAGLVTVRAFPDELRQIRSFLQIAESHLQRQVILEAKIIEVTLSDGYQQGIQWENVLGHAGSTNI DFSTSAGQGLSNAITSAIGGVTSINFTGSDFSTIINLLDTQGDVDVLSSPRVTASNNQKAVIKVGNDEYFVTDVSSTTVA GTTPVTTPQVELTPFFSGIALDVTPQIDEYGNVILHVHPSVIDVTSQTKEIKISDSTLELPLAQSEIRESDTVIRAASGD VVVIGGLMKSENIETVSKVPLLGDIPFLGEAFTSRTKSKKKTELIIMLKPTVVGGDTWKDELKRSQDLIERWYPSK
Sequences:
NA
Specific function: NA
COG id: COG1450
COG function: function code NU; Type II secretory pathway, component PulD
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA