| Definition | Shewanella frigidimarina NCIMB 400, complete genome. |
|---|---|
| Accession | NC_008345 |
| Length | 4,845,257 |
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Identifier: 114564870
GI number:
Start: 4413770
End: 4416382
Strand: Reverse
Name: Not Available
Synonym: Sfri_3718
Alternate gene names: NA
Gene position: NA
Preceding gene: 114564872
Following gene: 114564867
Centisome position: NA
GC content: NA
Gene sequence:
>2613_bases ATGAAAGGACTGACTAAACTAACGGCGGTTTCACTCGCAGTTGCAGCAGCATTGCCGATAATGGCAAATGCAGAAGTGTT AATTAGTGAATACGTTGAAGGTAGTTCAAACAACAAAGCGATTGAACTGTATAACAACAGTGACGTTGCAATTGATTTAA CAGGCTACAAATTAGTACGTTATAAAGACGGTGACTCGGCATCGCTTGATATGGTGGAGTTAACTGACACTATTGCGGCA AAAAGTGTCAAAGTCATTTTGCACCCAAGTGCAGCGATTACCTTACCAGCCTCAACCGACTCTATGACTGGTAACTTGTA CTTTAATGGTGGTGATGCTGTCGGCCTATTAAAAGACGGTGTGTTGGTTGATGTTGTTGGTGAAATTCCAACGCCAGCAG GTTGGGGGTTCGACACCACATTTCAGCGTAAATTAGACTCCTTAACCGCTAGCACCACTTATGATGCTAGCCAATGGGCC ACATTAGATAAAGACACCTTTAGTGGTTTGGGCTCGCTTGACGCCGCTGTTACACCAGAACCAAGTACATTTACTTGTAA CGGTGCAACGCTAACGAATATTTATGACATTCAAGGCGCTGGTGATTCAAGCCCATTAATTGCCGATGGTAGTTATGAGT CGGCTAATGAAGTGACCGTAAAAGGCATTGTTACTTCTAGAAGCGACAGTTTATACAAAGGTTTCTTTATTCAAGACATG CAAGGTGACAACTCACCTTATACTTCAGACGGCATTTTTGTCTTCTTGAACGAAGCCGCTCCAGACACTATTCAGCCAGG TACTGAAGTGTGTGTGCAAGGTAAAGTAAACGAGTATTACGGCTCGACTCAGATTAACCTTAAAGACGAACAAAAATTTG AAGTTGGTGCATTAGGTGAAGTGCCTGTAGCCAGTGCATTTTATGTTGCAGATGGCGAAACCCTAACGCAAGCATTAGAG CGTGTTGAAGGCATGAAAGTGGTATTAGATGCGGGCAGTGAGATGAAAATCACCCGTACCTTTAGCTACGATTATGACGG ACGTCGTAACAATATGGTGTTGTCACATAAAGCGCCATTAATGAAGCCTACTCAAGTATTTGAACCAAACTCTGCAGATT CTATTGCACTGGCTAAAGCTAACGCAGTAAACCAGTTATTTGTTGAATCTGATTTCAAAGCGAAAGATGGCGAAGTGCCT TACTTCCCAGATTTTAACGCTGAAACTGGTTACATTCGTGTTGGCGATCAACTCACTAACCTTGAAGGCGTTATTGGTTA TAGCTACAACGCATACCGCATCTTACCTACTAACCTTATTTCTGCTGGCGATTTTATCCGTGTAAATGATCGTACCGATG CGCCTACAGTGGCAGATATGGGTGACATTCGCGTGGCGAGCTTTAACGTGTTGAACTTCTTCAATGACGTCGTTGGCGGT GATGCTAATCCATCAGGCAGCAACCGTGGTGCATTAATAGAAGAAGAAATGGTGTTACAGCGTACTAAAATTGTGAATGC GCTTGTAGCCATGAATGCTGATGTTGTTGGCTTAATGGAAATCGCTAACAATGGCTTTGGCGAGTTAAGTGCTATTCAAA ACCTAGTAGATGCATTGAACGCAGAATTAACTGATGATCAAGCGTATCGTTTTGTTGAAATTGAAGATGCTGATAAGTAT GAAGACAAATTTATCGGCAGTGATGCGATTACGGTTGGCATGTTATATCGCCCAGCCCGTATTACATTAGACGGTGCGGC AAAAGTGATTGCGACGCCAGAACAACATGCAGCAGAAGGTGCTCAAACCCGCGAGAAAGATGGCGTTGTTGAGCAAAACC CAAGTTATGACAAGTTCCAACGTCATAGTTTGGTGCAAACCTTTAGCATTAATGATGAAAAACTGACGATTGTGGTTAAC CACTTAAAATCGAAAGGTTCAGGTTGTATTGAAGATTGGGCTGACTTTAACGAAAACGGTGAGCCAGCGGATTTACAAGG AAAGTGTAACTCTTTCCGTGTATCGGCAGCTAAAGTACTCGGTGAGTCACTAAAAGATGTTGAAGGTGATGTACTGGTTA TTGGTGATTTAAATGCCTATGGCAAAGAAGATCCGGTTGCAGTATTAACTGATTATGATGCCTCAACCACTGACCATGTT ATCCGCACCGCATCGTGGACTACCTTAAACGGTAAAGTGTACGAGCGTGAAGGCAGCGTGATTGATAAAGGTTATGGTTT AATTAACTTAAACACTCAAGCACATGGTGCAGATACTTACTCATATAGCTATAACGGCGAATTAGGTAATTTAGACCATG CGTTAGCCAATGAAAGTTTAGCGGCTAAATTAGTGGGTATTGACGACTGGCACATTAACTCAGTTGAATCTAACCTGTTT GAATATGGTAGCAAGTACACCGGAGAGCTGGTTAAAACTGAAAGTCCATTCTCAGCTTCAGACCACGATCCAGTGATTAT TGCATTAAGCTATCCAGCGCCAGTAACGCCAGTAACACCAACACCAGAGCCTGTTCAAGACAGTGATGGTGGTAGCTTAG GCTACTTTGCGTTGATGTTATTAGGTGCGCTAGGCTTACGCCGTCGCAGTTAA
Upstream 100 bases:
>100_bases AATGTGATCAATGTTCTTTTTTCTGTAAACAAACTTTGGGACAATCGCCCCGCATATTACAAAAAAATAGCATTTATATT ACAAAATATGGGGTTTAAAA
Downstream 100 bases:
>100_bases TTTTTATTGACTGTTTAAGCACTAATAAAAAAGGATGACCATTGGGTCATCCTTTTTTTATGTAAGTGACGCAGGCCATT AGCGGGTTACATCATTTACT
Product: endonuclease/exonuclease/phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>870_residues MKGLTKLTAVSLAVAAALPIMANAEVLISEYVEGSSNNKAIELYNNSDVAIDLTGYKLVRYKDGDSASLDMVELTDTIAA KSVKVILHPSAAITLPASTDSMTGNLYFNGGDAVGLLKDGVLVDVVGEIPTPAGWGFDTTFQRKLDSLTASTTYDASQWA TLDKDTFSGLGSLDAAVTPEPSTFTCNGATLTNIYDIQGAGDSSPLIADGSYESANEVTVKGIVTSRSDSLYKGFFIQDM QGDNSPYTSDGIFVFLNEAAPDTIQPGTEVCVQGKVNEYYGSTQINLKDEQKFEVGALGEVPVASAFYVADGETLTQALE RVEGMKVVLDAGSEMKITRTFSYDYDGRRNNMVLSHKAPLMKPTQVFEPNSADSIALAKANAVNQLFVESDFKAKDGEVP YFPDFNAETGYIRVGDQLTNLEGVIGYSYNAYRILPTNLISAGDFIRVNDRTDAPTVADMGDIRVASFNVLNFFNDVVGG DANPSGSNRGALIEEEMVLQRTKIVNALVAMNADVVGLMEIANNGFGELSAIQNLVDALNAELTDDQAYRFVEIEDADKY EDKFIGSDAITVGMLYRPARITLDGAAKVIATPEQHAAEGAQTREKDGVVEQNPSYDKFQRHSLVQTFSINDEKLTIVVN HLKSKGSGCIEDWADFNENGEPADLQGKCNSFRVSAAKVLGESLKDVEGDVLVIGDLNAYGKEDPVAVLTDYDASTTDHV IRTASWTTLNGKVYEREGSVIDKGYGLINLNTQAHGADTYSYSYNGELGNLDHALANESLAAKLVGIDDWHINSVESNLF EYGSKYTGELVKTESPFSASDHDPVIIALSYPAPVTPVTPTPEPVQDSDGGSLGYFALMLLGALGLRRRS
Sequences:
NA
Specific function: NA
COG id: COG2374
COG function: function code R; Predicted extracellular nuclease
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA