Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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Identifier: 114564836

GI number:

Start: 4368385

End: 4370901

Strand: Reverse

Name: Not Available

Synonym: Sfri_3684

Alternate gene names: NA

Gene position: NA

Preceding gene: 114564837

Following gene: 114564835

Centisome position: NA

GC content: NA

Gene sequence:

>2517_bases
ATGGAACGTAGAAGTTTTTTAAAAGCAAGTGCCGCACTGAGCTGTGTTGCAACTGTTACTGGTTGTAACACAAGTTCTGA
TGATGCCAATGTCATACCTCCGACACCGCCAGTCAGTGATGAAACCATTACTTGGTCTGCGTGTTTAGTTAACTGTGGTT
CAAATTGTCCTGTTAAGGTATTTAGCAGCGATGGGATTATCACGCGTGTTGAAGCGGATAACGAAACGACTGACGAGTAT
GGTGTTAATCATCAAATTCGCGCTTGTGCTCGTGGACGTTCTTTACGACAACGCACTTATGCTGCCGATCGTTTAAAAAC
ACCGATGAAACGTGTTGGTAAGCGTGGTGAAGGAAAATTTGTACCCATAAGCTGGGATGAAGCAGCATCCACTATTGCAA
GTGAATTACAACGTATTGCAAATGAATACAGCAATAAGTCCATATTAAAGATATATGGTACAGGTGCTTATTATGGATTC
TCTAGCTCAAGTTGTTTTAATCGTGTGTTAAATCTCAATGGTGGTTTCCTGAATATTTATGGTAACTATTCGTGGGCACA
ACAAACTGAAGCTGCCGCTGCAACAGGGTTTAGTAGTACTTCAGGCTCTAACTTGCTAGCACTAAATGATAGTGATTTAT
TTATTGGCTTAGGCTATAACCCCAGTGAGATGCGTCAGTCTGGATCTGGTGAAGGTTATGACTTTTTAAATGCACTGCAA
AAGAACAATGGTTTAGAAGTGATCATGATTGATCCTCGATATACCGACTCAATGGCTGGGAAGGAGGATAACTGGTTCCC
AATTCGTCCAGGTACTGATGCAGCGCTATGTGAAGGTATTGCCTATGAAATGATTAGCTCTGGTTGGGTAGATAACCATT
CTAAAAACTTTCTAGATAAATTCTGTGTTGGTTACGATAAAGAATCCTTAATTAATTTAAAAGCTGAATTCGAAATCTCT
GAAGATCCTGAAAAAAAAGCATATATCCCATACATTAATCCTAATGATAATTACAAAGATTATATTTTAGGTGAGGGTAC
GTTTATTTCAACTGGCCCTAAAACACCGAGCTGGGCAGCTAAGATCTGTGGTATTTCTGAAACACATATTAAATCAATTG
CGACAAAATTGATGAATGCTCGTGCCCCATTCATTGTTGCTGGTGCAGGTATAAACCGACATGCGAATGGTGAACAAGCC
ATGCGATCTTGCTACATGTTATCTTTCTTAACGGGTAAGGTTGGTCAACCAGGTGTAAGTAATGGTGCTCTTCCAAGTCA
AGGAAGTCTCAGCCGAAGTGGAATGTCTGGCTTATCTAACCCGATCAAAGAATCCATTTCTTGCTTCACTTTTCCTGACG
CAATAGAACGTGGTCATGAAATGACCACTCGAAAAGACGGGATTAGAGGAACTGCTGACTTAGATACGCCATTGGGCGCT
GATACAAAAGCAATTTTCGCGATTAATTCTAATGCGTTAATTAATCAACATTCAGATTCTAATGGCATAGCTAAAATTCT
TGAAGATGAAACTAAATGTGAACTCATCGTCGTTTGTGACTGTTGGATGACATCATCAGCTAAATTCGCTGACATTCTAC
TCCCAGATACCTCTTGGTTAGAGTCAAACGATTTAGTGAATGACAGTTATGCTTCGGGCATCATGGGCTACTTAGTTGCG
ATGAAAGCCGCCATTAAGCCGTTATGGGAATGTAAATCAATGTACGATATGTGTGCTTTGATTGCTGAGAAAATGGGTAA
ACTTGGCGAGTACACAGAAGGTAAAGATGAGGCCGGATGGTTAACTGAGCTTTATGAAAAAACGCGTACAAATAGTAATA
ATGCTAATGCAATTCCTCCTCTTCCTAGTACGTATGAAGAAGCACAAGCACAAGGAGTCTTCCGTGCATTTGATGGTAAA
ACTGTCGTTGCATTAGAAGACTATATAAATGGCACCGATACGCTAAATACTCCATCAGGGAAAATCGAAATTTTCTCACT
TGAGTTAGCTCAAAAGGGTACAGACTGGGAATTTGATAGCACAGTAAAAGGCAATTACATTACTAGCATACCTATGTACC
AAGCGACTTGGGAAGGTTATGAGGACAGTGAAACATCAGAGGATTATCCATTTCAATTAGTGGGTTATCATACAAAAGGT
CGTACTCACTCTAGTTATCATAATGTTCCTTGGTTACGTGAAGCTGTTGAAGATGCCGTTTGGATGAATCCTGCAGATGC
CTACAAGCAAGGCTTAACTCAAGGATCAAAAGCCCTTATTTGGAGTCAACGCGGTACTATTGAACTCCCAGTCAGAGTAA
CTCCTCGTGTTGCGCCAGGTGTTCTCGCTCTTGGCCAAGGAGCTTGGTACACACCAGATCCTTCAGGAAGAGTCGGTCCA
TCTGGCCATATTATTGATATTGGTGGATGTATTAACACTCTTACCCGTTACCAGCCTAGCCCTTTGGCAAAAGGTAATCC
ACAGCACACAAATCGCGTACAAATTGCTAGCGCTTGA

Upstream 100 bases:

>100_bases
GGGTGATATCAATCATAACTACAACGCACACCAGGTGATGTTGGCGTTTACCTACAAATTGCGCTAAGACGCATCGTTCA
TGCTACGAGAGGATATATCT

Downstream 100 bases:

>100_bases
TGGAGTAATTAAAAATGACAGAACAAACTCAATATGGTTTTTATTTAGATACCACCAAGTGCACAGGTTGTAAAGCGTGT
CACATATCTTGTAAAGATAG

Product: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>838_residues
MERRSFLKASAALSCVATVTGCNTSSDDANVIPPTPPVSDETITWSACLVNCGSNCPVKVFSSDGIITRVEADNETTDEY
GVNHQIRACARGRSLRQRTYAADRLKTPMKRVGKRGEGKFVPISWDEAASTIASELQRIANEYSNKSILKIYGTGAYYGF
SSSSCFNRVLNLNGGFLNIYGNYSWAQQTEAAAATGFSSTSGSNLLALNDSDLFIGLGYNPSEMRQSGSGEGYDFLNALQ
KNNGLEVIMIDPRYTDSMAGKEDNWFPIRPGTDAALCEGIAYEMISSGWVDNHSKNFLDKFCVGYDKESLINLKAEFEIS
EDPEKKAYIPYINPNDNYKDYILGEGTFISTGPKTPSWAAKICGISETHIKSIATKLMNARAPFIVAGAGINRHANGEQA
MRSCYMLSFLTGKVGQPGVSNGALPSQGSLSRSGMSGLSNPIKESISCFTFPDAIERGHEMTTRKDGIRGTADLDTPLGA
DTKAIFAINSNALINQHSDSNGIAKILEDETKCELIVVCDCWMTSSAKFADILLPDTSWLESNDLVNDSYASGIMGYLVA
MKAAIKPLWECKSMYDMCALIAEKMGKLGEYTEGKDEAGWLTELYEKTRTNSNNANAIPPLPSTYEEAQAQGVFRAFDGK
TVVALEDYINGTDTLNTPSGKIEIFSLELAQKGTDWEFDSTVKGNYITSIPMYQATWEGYEDSETSEDYPFQLVGYHTKG
RTHSSYHNVPWLREAVEDAVWMNPADAYKQGLTQGSKALIWSQRGTIELPVRVTPRVAPGVLALGQGAWYTPDPSGRVGP
SGHIIDIGGCINTLTRYQPSPLAKGNPQHTNRVQIASA

Sequences:
NA

Specific function: NA

COG id: COG0243

COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA