Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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Identifier: 114564156

GI number:

Start: 3591651

End: 3592667

Strand: Reverse

Name: Not Available

Synonym: Sfri_2992

Alternate gene names: NA

Gene position: NA

Preceding gene: 114564162

Following gene: 114564154

Centisome position: NA

GC content: NA

Gene sequence:

>1017_bases
ATGCGGGTTATTGGTATTGAGACATCCTGTGACGAGACTGGAGTAGCAGTATATGACGATAAGTTAGGCTTATTGTCGCA
TGTGCTATATAGCCAAGTTAAATTGCACGCCGATTATGGTGGTGTTGTGCCTGAGCTTGCCTCTCGTGATCATGTTCGCA
AAATTGTGCCATTGATTAAGCAGGCTTTATCAGAAGCTAATTCAAGCCTAAATGATATCGATGGTGTCGCGTATACCAAA
GGCCCTGGGCTAATTGGTGCATTGCTTGTTGGTGCTTGTGTGGGACGTTCTTTAGCGTATGCATGGAATAAACCGGCAAT
CGGTGTGCATCATATGGAAGGGCATTTATTGGCACCCATGCTGGAAGAAAATGCGCCTGAATTTCCTTTTTTAGCCTTGT
TAGTGTCTGGCGGCCATTCAATGTTAGTGCAAGTTGAAGGCATTGGACGATATCAAGTGTTAGGTGAATCTGTTGATGAT
GCTGCTGGCGAAGCTTTTGATAAGACCGCCAAGCTCATGGGCTTAGATTATCCTGGTGGCCCTCGTTTAGCCAAATTAGC
TCAAAAAGGCGTGCCTGCAGGATATAAATTTCCGCGGCCAATGACTGATAGACCAGGATTAGACTTTAGTTTTTCAGGAT
TGAAAACATTTACAGCAAATACTATCGCTGCAGAACCCAATGATGATCAGACTCGTGCCAATATTGCCCGTGCATTTGAA
GAAGCTGTTGTTGATACTCTTGCGATAAAATGCAAACGAGCCTTAAAGCAAACTGGTTACACACGTTTGGTGATTGCCGG
TGGTGTAAGCGCTAATACCCGTTTACGTGAGTCTTTGGCTGAGATGATGACCAAGTTAGGTGGTCAAGTGTATTATCCTC
GCGGAGAGTTTTGTACCGACAATGGTGCCATGATTGCTTATGCTGGTTTACAACGTTTACGTGCAGGGCATATTGAGGGG
CTAGAAGTTAAGGGGCAGCCTAGATGGCCTTTGGATACGTTGCCCGCAGTAGATTAA

Upstream 100 bases:

>100_bases
TACTTACTTATATCGATAGGTATTTAATCGTTAAACATTGGAGTATTTTCGCTGAGACGGGTAGAATTGGCGGCCTTATT
TTTAATGAAGACGAGAGATT

Downstream 100 bases:

>100_bases
TTGATGAGTTAGCGTGTTTGAGTTGGCATGATTGCCTTAAGTGATGACTTACTTTCAAGCCACCAAGAAAACCTAATACT
ATTTGGTATTGGTTTTTTTT

Product: putative DNA-binding/iron metalloprotein/AP endonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>338_residues
MRVIGIETSCDETGVAVYDDKLGLLSHVLYSQVKLHADYGGVVPELASRDHVRKIVPLIKQALSEANSSLNDIDGVAYTK
GPGLIGALLVGACVGRSLAYAWNKPAIGVHHMEGHLLAPMLEENAPEFPFLALLVSGGHSMLVQVEGIGRYQVLGESVDD
AAGEAFDKTAKLMGLDYPGGPRLAKLAQKGVPAGYKFPRPMTDRPGLDFSFSGLKTFTANTIAAEPNDDQTRANIARAFE
EAVVDTLAIKCKRALKQTGYTRLVIAGGVSANTRLRESLAEMMTKLGGQVYYPRGEFCTDNGAMIAYAGLQRLRAGHIEG
LEVKGQPRWPLDTLPAVD

Sequences:
NA

Specific function: NA

COG id: COG0533

COG function: function code O; Metal-dependent proteases with possible chaperone activity

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA