Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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Identifier: 114564124

GI number:

Start: 3558128

End: 3559885

Strand: Direct

Name: Not Available

Synonym: Sfri_2960

Alternate gene names: NA

Gene position: NA

Preceding gene: 114564123

Following gene: 114564125

Centisome position: NA

GC content: NA

Gene sequence:

>1758_bases
ATGAGCACTATAGCCAAGCTGTTCAATCCAATTGTGCGCTTCAGTCCATTTATGATGATGGCTTTGTTACTGATCCCTGT
ATTGGGTGGGTTAATTGGCGTTATTCTGCCTGCGTTTGGCTGGATCCCAGCACTCGATCAAACTCATTTTAGCTTGAATG
GTTTTCAGCAATTATGGCAAACACCAGGCATTGGCCACATGGCGTTATTGAGTATCACCACCAGCTTGGTGAGTACCTTG
TTGGCCTTTTTAATCACTATATTGATCCTAGCAAGTTACTTTACCAGTCCGTGGCTGGGTTATATTCAACGCCTTTTAGG
ACCTATTCTGGTTATCCCTCATGCTGCTGCAGCCATTGCTATTGGATTTCTTATCACCCCGTCTGGCATGTTGTCTCGCT
TAGTTTCACCTTGGTTAAGTGGTTGGGATGCACCACCAGATTGGCTATATCCACACGATGCGATGGGGCTGAGTATTATT
CTAGGCGTGACCTTAAAAGAACTGCCTTTTTTATTGCTGATGGCGTTGGGCGTATTAGCACAACCCGACCTTGGGCAAAC
ATTACGGGCGCAGCATAAAGTGGCATTAAGCTTAGGCTATTGCCCAATGATGGCATTTTTCAAAGTGGTTTTACCCAGTT
TATATCCCCATTTACGCTTACCAATATTAGCTGTATTGGCTTATGCCAGTGCCAGTGTAGAAATCCCCTTAATTTTAGGC
CCTAACAATCCACCGACATTGGCTGTGGCAATTATGCAGTGGTTTCATGACGTGGACTTAAGCCTACGCATTAAAGCGTC
TGCTGGGGCAATATTACAAATTCAACTGACGTTATTCGTATTAGCCTGTTGGTGGTTACTCGAACGCTTAGTGAGTCAAT
TTGCTAAGCCGATGTTAACCAATGGCGAGCGCGAATACGGCGGCGCTATCATCCAAAAAATTACCCATGTCATCACCGCC
TTAATGTTAACTATCATCGGTTTGGCATTAGTGGGAATGCTGTTGTGGTCTTTTGCTGGCTTTTGGCATTTTCCTGATGC
CTTGCCACAACAATTTGTGATACTGCATTGGCAAGCGGCATTGCAACAAATGCACACGCCACTTATCGACACGGTACTGA
TTGCCCTCTGCGCCACCGCTGTGGCGATAACCTTAACCTTACTCACCTTAGAAGCGGAGCAGCACAGTGGGAAATCGCTA
TCGCTGTTGGGCAGTGTATTAATTTATCTGCCTTTGCTTATTCCAAGCATCGCATTTTTATTTGGTTTGGTGTGGTTACT
TGAGCAAGTCAACAGCCAACATACTTTTATCAATGTGGTACTGGCCCATGTATTGTTTGTATTGCCTTATGTGTTTTTAT
CGCTGGCCAGTAGCTATCGTCGTTTAGACCCACGCTTTAGTATTGTTGCGGCCAGTCTTGGTGCCACTAAAGCTAAAATC
TTTTTCAGGATTAAACTGCCCATGTTAATTGGGCCGATATTCATCGCTTGCGCACTCGGTTTAGCCATTAGCTTTAGTCA
ATACTTACCCACTTTGCTTACTGGTGGTGGGCGTATTAACACCATAACCACCGAAGCGGTTTCGCTCGCCAATGGTGGAA
GTCGCAGGATCAGTGCCGTATATGCGTTAATGCAAATGATCCTCCCTGCTTTAGGTTTTTTACTGGCTTGGCTAATACCA
AAGATCATTGTCAAAAATCATCGCCAAAAATCATTGCCAAAAATGATGACCAAAATGTTAGTTAAGCGTCAGCAATAA

Upstream 100 bases:

>100_bases
CTATTGCTAACCAAGCAATCAGCCCAGCGTTAAGCGAGCCAGATCCAAGTTGGAGTAAGGTTATTACAAAGCTATGGTTA
CAACGCTATGGAGTGATGCA

Downstream 100 bases:

>100_bases
GGAAAATAATGCAAACATTCGCGAGTACTGCCAACCGCTCAAATACAACCTCAACATCAGAACTCACCATTGATGGGTTG
ATTTTGAGTCGCCAGCAACA

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>585_residues
MSTIAKLFNPIVRFSPFMMMALLLIPVLGGLIGVILPAFGWIPALDQTHFSLNGFQQLWQTPGIGHMALLSITTSLVSTL
LAFLITILILASYFTSPWLGYIQRLLGPILVIPHAAAAIAIGFLITPSGMLSRLVSPWLSGWDAPPDWLYPHDAMGLSII
LGVTLKELPFLLLMALGVLAQPDLGQTLRAQHKVALSLGYCPMMAFFKVVLPSLYPHLRLPILAVLAYASASVEIPLILG
PNNPPTLAVAIMQWFHDVDLSLRIKASAGAILQIQLTLFVLACWWLLERLVSQFAKPMLTNGEREYGGAIIQKITHVITA
LMLTIIGLALVGMLLWSFAGFWHFPDALPQQFVILHWQAALQQMHTPLIDTVLIALCATAVAITLTLLTLEAEQHSGKSL
SLLGSVLIYLPLLIPSIAFLFGLVWLLEQVNSQHTFINVVLAHVLFVLPYVFLSLASSYRRLDPRFSIVAASLGATKAKI
FFRIKLPMLIGPIFIACALGLAISFSQYLPTLLTGGGRINTITTEAVSLANGGSRRISAVYALMQMILPALGFLLAWLIP
KIIVKNHRQKSLPKMMTKMLVKRQQ

Sequences:
NA

Specific function: NA

COG id: COG4135

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA