The gene/protein map for NC_008345 is currently unavailable.
Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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The map label for this gene is Not Available

Identifier: 114564047

GI number:

Start: 3465090

End: 3468704

Strand: Reverse

Name: Not Available

Synonym: Sfri_2883

Alternate gene names: NA

Gene position: NA

Preceding gene: 114564048

Following gene: 114564046

Centisome position: NA

GC content: NA

Gene sequence:

>3615_bases
ATGTTCAGTAAGTATCCGATTTTTATTATGTTATTTTCTGTATTGGGCTTTGTAGCTAATGCTGTTGCAGATGATACCGA
ATTATATGTTTTAGAGTCATCTGTGCGCAGTGATGATAATCCTCAAGTGCTCATTATATTAGACACTTCAGGTAGTATGG
GTAACACGATGAGCGCAAGCCCTTTTCTCGTTCAGCCTAATCTTACTTCAGGCACCAAGCTGTATTATTCAACTAGTTCA
AGTACAGTGCCAACTGCCAACAGTACTAATTTTATTACTTACAGTAAAAATGGTTGTCACTCTTCGGTTGAATTTTTACA
AAAATTCGGTATTTATACGGGGTATTTTCGCGAATATAAAGGCAGTAAATGGCAAGAGTTTCCTGTAAGTGATGGAAGCA
ATATTACCAAAGTAGATTGTTATGAAGATATTGCTGTGGGAGATACTACCAATGCAAGTGGTGTTGGTGCTGGTTACCCT
GTAGATGATTTAAGTGATGCCTATAAAAATGATGGAAACGCGCTCAACAATGCCAAGTTAACCGATTTTGGTCTCGGAGA
ACCAATCACATTGTTTACCCAGCAGTATGTGCAATGGTATTACAATAAGCCGGCAGCAACTAATACGGACAGAATTACAG
TAGCCAAACGTGTATTAAATGAAGTGATTGTAAATACACCAGGTGTTGATCTTGGTCTAATGTTATTTAATTATAATGCT
AGCGGTAGCAATCGCTCTTCAGAAAATAAAGATGGTGGGCGAGTCGTATCAAAAATTAACACTGGTAATATTAATAATAA
GAAAGCGTTAGCTTCTATCGTCAAGAACACCATCGCAATAAAAAGCAATAATACACCATTGTGTGAAACCTTGTATGAAG
CAGCATTATATCTACATGGCAAACCATTAGAGTATGGGCATGATACTTATGATTCAGTAGCTGCAACCCCTCTAAATAAA
ACATGGAAGTGGGTTAAAAAGTGGAATGGGTGGATAGAGGAGTCAACACCAGTAAATCCTGCTCAATATAACCCTGGTTA
TGATGCTACCGCGGAATCAGTAGATGGCTATATAAGTCCATTTATAGGTAAAAAATGTGGCTCGAATGCATCGATAATCT
ACATTACTGATGGCGCCCCAACTAGTGACACTGATGCGCAGGGGAAAGTAAAATCACTATTAGGACTTGCATCAACAACC
ACAGATGCGGATGTTCCTGGGAGTGAAAGTCTAGGAAACGATAATTATAGTTTGTTACCCCCCCTTGCTCATTGGTTAGC
AACAAATGATGTTAATCCAAACTCAGAAGGTGACCAAGTTGTTAACACTTATACAATCGGTTTTAGCGCCGATGCACCAG
TTGATATATTGATATCGACAGCAGCATTAGGTGGGGGTAAATATTATTCAGCATTAGACCCCGCCGAATTACAAGCATCT
TTAATTAGCGCTATTGCCGCTATCGAATTAGACAGTTCTAGCTTTTCTTCTCCTTCAGTCGTGCTTGATAAAACCCAAAC
GGGGAATTCTGCTTATTTTGCTATGTTTTTACCAGGCAAAGGGCCGCGCTGGTCTGGTAACCTTAAAAAATTCAAGATTA
GCTCTTCAGGAGAGGTATTAGACAAAAATAATATCAAAGCATTTTCTAGTGATGGACGTATTGCTAAAGATGCATGTTCA
TTATGGGCTACCGATTCCGATTGTGCCGCTGGAGACTATGAAGGGTATGATGTTAATGACGGTGGTGTCGCTGCTGCGTT
GCGATATAACTACCAATATGCTTCTGGGCTCGCCACAAGAAAGGTACTTACAAATACTAGTGATTCTGGCCCGCTGGTTG
CTTTAACAAAGAGCAATGCAAAAATTAAAGGTAATTTAACAGATGTACAATTGGCAAATTTCTTAAATGTTGATCAAAAT
AGTATCGAAGACACCTTAGCTTGGATAAAAGGTCAGAATGTTGATAATGAAAAATATGGTTTAACAACAGTCCCCTATCT
TAGACAGGACATATTAGGCGATCCACTTCATTCAAGACCTCTGGTCATAAATTATGGCACAACGACTTCACCTGATATAA
GAATTATTATGGGAACGAACCATGGCTTTGTTCATATGTTTAAAGATATTGAGTCAGAGGTTAATGGTGAAAGTGTCAGT
GCTGTATCTGAATCATGGGCTTTTATTCCTCATGAATTATTACCTAATATTAAAAGCTTAAGGGATAACCCTCAAACTGG
TGTGCATTCTGTCTATGGAATGGATGGTTCACCTGTCCCTTATCTCGAATATGATGCTGATGGTAAAGTCAATAAAGCAT
GGATATTTATGGGAATGAGAAGAGGTGGAACTTCTTATTACGCTTTAGATGTAACCAATAAAGATGCTGCACCAACTCTA
TTATGGGTTAAAAACAACAGTAATTATCCATTATTAGGACAATCCTGGTCTGAACCTGTAATCACTAAAATATCTGGATG
GAAAGATTCAACCGGGAAAGCAAAACCTGTATTAGTTATTGGTGCCGGATATAATCCAAATACCAAAGACGGAGCCAGTG
TAGGTACTAATGACACTACAGGGGCAGGTATATATATTTTAGATGCAGCAACAGGATCTAAACTCCATAGCTTTAGTGCC
TCAGGCTCAGATACCACTATGCCTGGCATTGTTGATAGTATTCCGAGCAAAGTGGCAGTATTAGATAGTAACAATGATCA
ATTAACCGATCGCATTTACGCAACAGATACTGGTGCTAATGTGTGGCGTTTAGATTTACCGGGGTTACCGACAGACACCC
AAAACCCATGGAGTGCGTATCATTTTGCGAGCATGGGAGGAGGGGATCTTACATCTGATATTCGTTTCTATTCTGAGCCA
GTAATAGCTCAAACAGCTTTTAGTAATGTAGCTGAACATACTTATACAGATATAAACAATAATAGTGTCACTTCAAAACA
ATACCAAAGCATCCCTTACGATGCAGTTGTTGTAGGGAGTGGACATAGAGCCAATCCTTTGAATAAAAGTAGAAATGATA
AGTTTTTTGTATTCCAAGATAGGAATATTATTTCTAAATCTTATAGCTCTGCTGCTGGGAATACTGTTCCAGATACATTA
ACTATTTCAGATTTATATGATGTAACTACGGAGTCCCCAACCGAAGAAACAGCATTAATCACATTTGGCCTAAAGCGAGG
TTGGTATTATCGTTTCGCAGATGCTGGTGAAAAATCTTTATCCGCCGCAACAATTGTGCAGGGAAAAGTATTTTTTACAT
CCTATGTGCCTCAGACCGGAGCAACTGAAAATGCATGTTTGGTTCCAGGTGAAGGACGTCTTCGCGGCCGAGATCTCCAT
AAAGGAGGGAAAGTTTACAGCAACTCACAAGACTATTTTAAAATGAGCGAACAGGTTCCTGATACTCCAACCTTAGTAAT
TCCTAAAAATGGTGATGATAGTAGCTATATGTATTTAATCGGAATTGGCGATGCCGCAAATGATATGATCAAAAAAGATC
TTTTGGGTGATGATGGTTGTGCTGCTGGCGATAACAAATGTGTCGGTGGTGGCTTAGGCGTTAATCAGATCTATTATCAT
ATGAAAGAGAATTAA

Upstream 100 bases:

>100_bases
AGAGTCGAAATTTCTAGCACAGTTAATTACGGACGAGGTGGTTACGGAGAGCTGTCTGTGACAATGGGTGTTGAGCAAGA
AGTGCTCAAGGAGAATTAAA

Downstream 100 bases:

>100_bases
AAATGAAAGTAACAATCACTAAAGCATACTCTGGTTTTACCTTAATAGAGGTAATGATTACCGTCGTCATTGTAGGGATT
TTAGCTTCTATTGCATATCC

Product: type IV pilin biogenesis protein, putative

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1204_residues
MFSKYPIFIMLFSVLGFVANAVADDTELYVLESSVRSDDNPQVLIILDTSGSMGNTMSASPFLVQPNLTSGTKLYYSTSS
STVPTANSTNFITYSKNGCHSSVEFLQKFGIYTGYFREYKGSKWQEFPVSDGSNITKVDCYEDIAVGDTTNASGVGAGYP
VDDLSDAYKNDGNALNNAKLTDFGLGEPITLFTQQYVQWYYNKPAATNTDRITVAKRVLNEVIVNTPGVDLGLMLFNYNA
SGSNRSSENKDGGRVVSKINTGNINNKKALASIVKNTIAIKSNNTPLCETLYEAALYLHGKPLEYGHDTYDSVAATPLNK
TWKWVKKWNGWIEESTPVNPAQYNPGYDATAESVDGYISPFIGKKCGSNASIIYITDGAPTSDTDAQGKVKSLLGLASTT
TDADVPGSESLGNDNYSLLPPLAHWLATNDVNPNSEGDQVVNTYTIGFSADAPVDILISTAALGGGKYYSALDPAELQAS
LISAIAAIELDSSSFSSPSVVLDKTQTGNSAYFAMFLPGKGPRWSGNLKKFKISSSGEVLDKNNIKAFSSDGRIAKDACS
LWATDSDCAAGDYEGYDVNDGGVAAALRYNYQYASGLATRKVLTNTSDSGPLVALTKSNAKIKGNLTDVQLANFLNVDQN
SIEDTLAWIKGQNVDNEKYGLTTVPYLRQDILGDPLHSRPLVINYGTTTSPDIRIIMGTNHGFVHMFKDIESEVNGESVS
AVSESWAFIPHELLPNIKSLRDNPQTGVHSVYGMDGSPVPYLEYDADGKVNKAWIFMGMRRGGTSYYALDVTNKDAAPTL
LWVKNNSNYPLLGQSWSEPVITKISGWKDSTGKAKPVLVIGAGYNPNTKDGASVGTNDTTGAGIYILDAATGSKLHSFSA
SGSDTTMPGIVDSIPSKVAVLDSNNDQLTDRIYATDTGANVWRLDLPGLPTDTQNPWSAYHFASMGGGDLTSDIRFYSEP
VIAQTAFSNVAEHTYTDINNNSVTSKQYQSIPYDAVVVGSGHRANPLNKSRNDKFFVFQDRNIISKSYSSAAGNTVPDTL
TISDLYDVTTESPTEETALITFGLKRGWYYRFADAGEKSLSAATIVQGKVFFTSYVPQTGATENACLVPGEGRLRGRDLH
KGGKVYSNSQDYFKMSEQVPDTPTLVIPKNGDDSSYMYLIGIGDAANDMIKKDLLGDDGCAAGDNKCVGGGLGVNQIYYH
MKEN

Sequences:
NA

Specific function: NA

COG id: COG3419

COG function: function code NU; Tfp pilus assembly protein, tip-associated adhesin PilY1

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA