Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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The map label for this gene is Not Available

Identifier: 114563984

GI number:

Start: 3400051

End: 3401616

Strand: Direct

Name: Not Available

Synonym: Sfri_2820

Alternate gene names: NA

Gene position: NA

Preceding gene: 114563983

Following gene: 114563985

Centisome position: NA

GC content: NA

Gene sequence:

>1566_bases
ATGCAAATCATCCACCATGGAGCGGTAAACGGTGTCACAGGATCATGTCATCAACTGGATGTGAATAATTACAATAATAA
CAGTCATAACCACGGAAACGGCAACAACATCAGCAGTTATCTTATCGATTGCGGGCTATTTCAAGGTGCAGAAACGGCAG
GAAAAAGTTCAGCAGACCAACTGCAAATCACCTTTGACATTCAACATATTAAAGCGCTTATTATTACCCATTGCCATATC
GACCATGTTGGGCGAATTCCCTACTTACTGGCAGCAGGATTCAATCAACCGATTTATGCAACAACCGCTACAGCAGCACT
ATTACCACTGGTAATCGAAGACGCGTTAAAAGTGGGTGTGACGCGCGACCCTAAATTGATCCAGGCTTGTATCAATCGAC
TTAAAAAACTGCTTGTCCCAGTCGATTACGGTCAGTGGATAACGCTACCGATAAACATACCAACAGCTATATCTTCGACA
GAAAGTGCCACAGAAATGGACTCTGCATCATCAATAGAGAAAACAACAACCGAACCGGCAACTATATCATCGACTGAAAA
TACCGAAGATATCTCAAAAGAAACAATCGTCACTCCAGCTATTTATCACAAAGCAAAACTAAAATTCAAACCCGCTGGGC
ATATACTCGGGTCTGCCTATGTTGAAATAGACTTAAGCGGTCCTAGCGGTAACCATCGAGTTGTTTTTTCGGGTGATTTA
GGCGCAACCTACGCACCGTTACTTGCCAGTCCAAAAAGTCCTTACAGAGCAGATACCTTAGTCATTGAATCCACTTACGG
CGATAAAAACCATCAAGGTCGTAAAGAACGCAGCAAGCAACTCAAAAATATCATCGAAAGCGCCGTAAAAGATAATGGCG
TGGTACTCATTCCTGCATTTAGCATCGGCAGAACCCAAGAGCTATTATACGAATTCGAACACATCATTCATCGCAATAAA
CACAACCCTGTATGGGAAAACATCGACATTATCGTCGACTCTCCCATGGCAGCTAACTTCACCCAAAAGTATCGTCAGTT
CAAAACACTCTGGGACAACGAAGCCAAAGGTAAACTAGCCCAGGGACGCCACCCACTCTACTTCAACCAACTCATCACCA
TAGACAGCCACCAGGACCATCTTTCAGTAATCAACTACCTCGACTCAACCCACAAACCCGCCATCATCATCGCCGCATCC
GGCATGTGCACCGGCGGAAGAATCACCAACTATCTCGCCCGCTTCTTACCCATCCCCACCACAGACATACTGTTTGTCGG
CTATCAAGCACAAGGCACTACAGGCCGAGACATACAAACCTACGGCCCACAAGGCGGATACGTTTACATCAACGAACTCA
AGATTGATATCAAAGCCGCCATCCACACCATCAGCGGTTACTCCGCCCACGCAGACCAACACAACCTCATCAACTTCGTC
AAACGCATGCACCACAAACCCAGCCACATCAGAATCGTCCACGGCGACAATGAAGCCAAACAAGCATTAGCAAAGGAATA
TAGAAAAATGCTGCCAGAGGCAGAAATCGTTATCGGTAAAGAATGA

Upstream 100 bases:

>100_bases
GAACCTCGCAAAATCTTAAAACCACTGCTAAGTTAACTAACCGTACTTAATACAATTCTCGTTAAATACAATTCTCGCTA
AATACAATTAAAGGACTAAC

Downstream 100 bases:

>100_bases
TAAAGCCTAGAACGCTACGCTGCTAGTACGCTACGCGGCTAGATTCTATAAAAGCAAACAGCGCACATCCGCATAGCGGC
CTAGAAGGACGGTTAGTCAG

Product: beta-lactamase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>521_residues
MQIIHHGAVNGVTGSCHQLDVNNYNNNSHNHGNGNNISSYLIDCGLFQGAETAGKSSADQLQITFDIQHIKALIITHCHI
DHVGRIPYLLAAGFNQPIYATTATAALLPLVIEDALKVGVTRDPKLIQACINRLKKLLVPVDYGQWITLPINIPTAISST
ESATEMDSASSIEKTTTEPATISSTENTEDISKETIVTPAIYHKAKLKFKPAGHILGSAYVEIDLSGPSGNHRVVFSGDL
GATYAPLLASPKSPYRADTLVIESTYGDKNHQGRKERSKQLKNIIESAVKDNGVVLIPAFSIGRTQELLYEFEHIIHRNK
HNPVWENIDIIVDSPMAANFTQKYRQFKTLWDNEAKGKLAQGRHPLYFNQLITIDSHQDHLSVINYLDSTHKPAIIIAAS
GMCTGGRITNYLARFLPIPTTDILFVGYQAQGTTGRDIQTYGPQGGYVYINELKIDIKAAIHTISGYSAHADQHNLINFV
KRMHHKPSHIRIVHGDNEAKQALAKEYRKMLPEAEIVIGKE

Sequences:
NA

Specific function: NA

COG id: COG1236

COG function: function code J; Predicted exonuclease of the beta-lactamase fold involved in RNA processing

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA