Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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Identifier: 114563883

GI number:

Start: 3268802

End: 3270598

Strand: Direct

Name: Not Available

Synonym: Sfri_2718

Alternate gene names: NA

Gene position: NA

Preceding gene: 114563882

Following gene: 114563884

Centisome position: NA

GC content: NA

Gene sequence:

>1797_bases
ATGCTTTCATTCTCGACTACCAAAAAACGTAAAATTGTACTGAGCATCATGCTCATCATCGGGTTATTACTGACCCTAAA
AGTTACGTATTGGTATTTACTTGAACAGGGCACAAAGTCCATTGCTGAACAATCTGAAAAACAAATCAATGAACTGGTAA
TTTTTATTGATAACGCCCTTTCACACTACGAAAATATTCCAGCAGTGCTCGCGCAAAATCCCATCTTAGAGCAAGGGTTA
CTTGATCAACGCAATCCTCAAACAATCGAAAAACTTAACGCTTATTTATCTGAATTACAGCAAGTTACAGAGTCGTCAGA
TATTTACCTTACTGATGCGCTCGGAGTTGCTATTGCCGCCAGCAATTGGGATGTACCCAACTCTTTTATAAATCATGATT
ATTCATTTAGGCCCTACTTTATTGATGCTATATCAGGAAAGTCTGGACGATATTATGCAGTCGGTACCTCATCCAATAAG
CGCGGATTCTACTTTGCTAATCCGGTATATCACAAGGGAGTGGTATTGGGTGTAGTGGTTGTGAAAGTTGATATAAGTTT
GATTGAACAACAAAGTAGTGGCATTGCCATCGCAAGCCAATATGAGTTTATGATTAGCGATCCTGACAATATAGTGTTTC
TTTCAAGCATTAATAGTTGGCGATTTAATTCATTAACGCCGCTAACACAGGCAAAACGTTTTGCACTTAATTCATCAAAA
CGCTATGCAAACCGACCCATTGGTGAGCTTAGCATTACCCCTAATTTTGCCTTAGGTGAGTCAAGCACGACTCAGGTATA
CCAAATCTCGTCTTCTGAAGGCAAAGAGAAGTATTTAGAACGCCACCAGTTAATGCCTAATGCTAACTGGAATGTACATA
TTCTAGCCCCCATGAAACCGTTATATGAGTCTTTACCGCCTATTATGTTGCTAGCGGCGACACTTTACTTATTACTGGCT
TTGTTTATTATTTACAGCTTAGAACGAAGAAAAAACTTTCTTCGGATGCGTCAAGCCCAAAACCTATTAGAACAACGCGT
GAAAGAACGCACATTAGAGTTAGAACAAGCCAACACTCAATTAAAAGACACTCAAGACGAGCTCATCCAAGCGGCAAAAC
TCACGGTCATAGGCAGTCTTTCCGCCAGCATAAACCATGAACTCAATCAACCGCTGGCCGCTCTGCGCAGCTATGCACAA
AACACTCAAACCTTTATTGGCCGTAATATGATTGAAGATGCCAGTAGCAATATCAAAATCATGATAGAACTAACTGATCG
GCTTGCAGATATTATTGGTCAGTTTAAAAGCTTTACACGTAAATCTCAGGGTAAAGACAACGCTACTGAAATTAATCAAT
CAATTGAGCAAGCACTTACCATTGTTCAACCTGAAATGGATAAACAAGGCGTTAAGTTGTCGCTTAAATTATTAACGGGC
AAATGCCAAATATGGGGTGACAGCGTCAGATTACAACAAGTACTGGTTAACCTTATTAGCAATGCTATCGTTGCTATGCA
TCAATCCACTGAGCGACAATTGCAAATCAAAGTCTATTGCGACAGTAAGGTCAATATAAGTATCCAAGACAGTGGTCCTG
GTGTAAGAGAAAGCCAGATGAACAAAATTTTTGAACCTTACTATACCACCAGTGAGCGTCAAGGATTGGGCTTAGGGTTG
TCCATCTCGCAGCGGATTATTGAGTCAATGCAAGGTTCTATTACTGTCGAGAACGCCATACCCGGTGGGGCTATTTTTCA
TATCATTTTGCCACTTTATTTACGCGAGGAAGTGTAA

Upstream 100 bases:

>100_bases
CTTGATAATTCGCGTATTATAGACGAGCCTTAATTTATTAAGGCTCGTTTTTTTACACATGCTCAATAATCATCATAACT
ATTACCGATTGGGAATATGC

Downstream 100 bases:

>100_bases
ACGTGACTCAAATACAAGACATCAATAATTATCAAGTCATTATTGTTGATGATGAACCTCATATCGGTATCGTATTACAG
CAATTATTTAAACTAGAGAA

Product: periplasmic sensor signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>598_residues
MLSFSTTKKRKIVLSIMLIIGLLLTLKVTYWYLLEQGTKSIAEQSEKQINELVIFIDNALSHYENIPAVLAQNPILEQGL
LDQRNPQTIEKLNAYLSELQQVTESSDIYLTDALGVAIAASNWDVPNSFINHDYSFRPYFIDAISGKSGRYYAVGTSSNK
RGFYFANPVYHKGVVLGVVVVKVDISLIEQQSSGIAIASQYEFMISDPDNIVFLSSINSWRFNSLTPLTQAKRFALNSSK
RYANRPIGELSITPNFALGESSTTQVYQISSSEGKEKYLERHQLMPNANWNVHILAPMKPLYESLPPIMLLAATLYLLLA
LFIIYSLERRKNFLRMRQAQNLLEQRVKERTLELEQANTQLKDTQDELIQAAKLTVIGSLSASINHELNQPLAALRSYAQ
NTQTFIGRNMIEDASSNIKIMIELTDRLADIIGQFKSFTRKSQGKDNATEINQSIEQALTIVQPEMDKQGVKLSLKLLTG
KCQIWGDSVRLQQVLVNLISNAIVAMHQSTERQLQIKVYCDSKVNISIQDSGPGVRESQMNKIFEPYYTTSERQGLGLGL
SISQRIIESMQGSITVENAIPGGAIFHIILPLYLREEV

Sequences:
NA

Specific function: NA

COG id: COG4191

COG function: function code T; Signal transduction histidine kinase regulating C4-dicarboxylate transport system

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA