Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 114563125

GI number:

Start: 2319199

End: 2320419

Strand: Direct

Name: Not Available

Synonym: Sfri_1954

Alternate gene names: NA

Gene position: NA

Preceding gene: 114563124

Following gene: 114563126

Centisome position: NA

GC content: NA

Gene sequence:

>1221_bases
ATGAGTCAGTTGAACTATTTAGAGAAACTGCTGGATGGGGTAGATGTTGAGTGGAAACCATTAGATGACATTTCTGTAAA
GATTTCTTCTGGTGGTACACCAAAAACAGGTGTTGCCGAATTTTATGATGGTGATATTCCTTGGCTGCGTACTCAAGAAG
TTAATTTTGATGAAATCTGGGATACTGGCGTAAAAATTACTGAAGCTGGAGTTGATAACTCAAGCGCAAAATGGATTCCT
GCAAATTGCGTTATTGTAGCTATGTATGGAGCAACGGTTGGGAAAATTGGCATTAACAAAATTCCTATGACCACAAATCA
AGCATGCGCGAACATACAACTAGATGGGAATATAGCTAATTACCGATATGTGTTTCATTTTTTATTAAGCCAATATGAAT
ATATAAAGTCACTCGGGTCTGGCTCGCAGACCAATATTAATGCGGGAATAGTAAAAAAACTTGTAGTCCCCATCCCATGC
CCAAATAACCCAGAAAAATCGCTGGCAATACAAGCTGAAATAGTGCGTATTCTGGACGCATTTACCGCCATGACCGCCGA
GCTGACCGCCGAGCTTATCATGCGGAAAAAACAATACAACTACTACCGCGACCAGTTGCTAAGTTTTGAAGAGGGTGAAG
TTGAGTGGAAGACGTTGGGCGACCTTGCAGAAAATCTGGACTCAAAGCGTAAGCCTATAACCAGTGGTCTGAGAGAAGCT
GGCGAAATTCCATACTACGGTGCATCTGGTATCGTCGATTATGTCAAGGATTACATATTTGACGGTGATTACTTATTAGT
CTCTGAGGATGGCGCAAATTTATTAGCCCGTAATACGCCTATAGCATTTAGTATTAGTGGTAAAACATGGGTAAACAATC
ATGCTCACGTGCTTAAATTTGAAACTTACGCGGAGAGGAAGTACGTTGAATACTATCTGAACAGTATCGACCTAACTCCT
TACATTTCTGGAGCAGCCCAACCAAAGTTGAATAAGAAGAACTTGGAAAGTATAAATATTCCAAATCCAGCGCCTAAAGA
AAAAGAACGCATTGTGGCTATCTTAGATAAATTTGATTCTTTGACCTGTTCAATTAAAGAAGGTCTGCCCCGCGAAATAG
AACTCCGCCAAAAGCAATACGAGTATTATCGTGACCTGTTGTTGAGCTTCCCTGCCAGTCCGGCAGGCGGGCCTCAATCT
CATTCAGATGAGGCGGCTTAA

Upstream 100 bases:

>100_bases
AGCTTAATGCCGAGCTTAAAACCACCGTTGCTAAAATTGATGCGCTTCGCCGTGATATTGACGCCATTGTAGCGGAAATT
GAGGCTGAGGAGATTGAGGC

Downstream 100 bases:

>100_bases
TGAGTAAAACGCTAACGGAAATAGCAGAGTCAGTTATCCGGAAATTCCGGATAACTGTCAACGAAGGTAAGCATAAGGAG
GAAGCTTAATGGCCTATCAA

Product: restriction modification system DNA specificity subunit

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>406_residues
MSQLNYLEKLLDGVDVEWKPLDDISVKISSGGTPKTGVAEFYDGDIPWLRTQEVNFDEIWDTGVKITEAGVDNSSAKWIP
ANCVIVAMYGATVGKIGINKIPMTTNQACANIQLDGNIANYRYVFHFLLSQYEYIKSLGSGSQTNINAGIVKKLVVPIPC
PNNPEKSLAIQAEIVRILDAFTAMTAELTAELIMRKKQYNYYRDQLLSFEEGEVEWKTLGDLAENLDSKRKPITSGLREA
GEIPYYGASGIVDYVKDYIFDGDYLLVSEDGANLLARNTPIAFSISGKTWVNNHAHVLKFETYAERKYVEYYLNSIDLTP
YISGAAQPKLNKKNLESINIPNPAPKEKERIVAILDKFDSLTCSIKEGLPREIELRQKQYEYYRDLLLSFPASPAGGPQS
HSDEAA

Sequences:
NA

Specific function: NA

COG id: COG0732

COG function: function code V; Restriction endonuclease S subunits

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA