Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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Identifier: 114563089

GI number:

Start: 2269609

End: 2271171

Strand: Reverse

Name: Not Available

Synonym: Sfri_1918

Alternate gene names: NA

Gene position: NA

Preceding gene: 114563090

Following gene: 114563088

Centisome position: NA

GC content: NA

Gene sequence:

>1563_bases
ATGCTGGTCTTTAGTTTAAGAGCAGTAAATAAAATTTGTATTAAGGACAATAATACTGGCTGGCGAGTATTGAGAGGGTT
GATCTTCTTTTTCGTGTTGGGCTATTTAGGCGTTTTTTATTATCTGAGTAAACAATCAAATTTAGCTGTATCTGATATCA
TTTTTTGCATCATTATGTTCTGTGGAGGAGGATTTGTCGTTTTGGTCACTCGACTGAGTTTATTGAGTTTAGTAAAAGTC
GAAAAATTGGTCATTAATGAACGTAGTAATGCTTTACACGATAGCTTAACAGGCCTACCTAACAGAAAATACTTAATGGA
TTCATTAAGCCAGCATGTCAATGCTGGGCTGCCATTTAGTCTACTGCTGATTGATTTGAACAGATTTAAGCAAGTAAACG
ATGCATTAGGCCATTACTATGGTGATTTATTGCTTATCGAAGTCGGTAAAAACATCTCTGAACATTTACCCGATGATTCA
CAGTTATTTAGACTAGGCGGAGACGAGTTTGCCGTCATTGTCACCCAAGTAGAATTAGAACCCCTTCAACACACCATTAA
CACAATCCATTTAGCACTTGAATCAGCATTTTGTATTGAAAACTACGATTTACTTGTTGGTGCAAGCATTGGCTTAAGCC
ATTTTCCTATTCTTGCAAATGAAATAGGTCTGCTATTACAACAAGCAGATATTGCAATGTACTCAAGTAAGAAGTTAGCC
ACCTTATACACTATTTATGACCTGACTCTTGAAAACAATGCTGCCGAAAAAATGAATATCAGTGCTTCATTAAAACGTGC
CATTGAACAACAAGAATTTGAACTCTGGTATCAACCTATCATTAATTTACGCAACAACCGTCTTTATGGTGTTGAAGCGC
TTATTCGCTGGCCTCGGCCAGATGGCAGTTACACCCCGCCAAGTGTGTTTATTCATATCGCGGAACAAACCACCCTAATA
AACCAAATAACCGACTGGGTTATGCAACAAGTTGCAAAGGATGTTGAACATTTTGAATCCTTAGGACTATCTCTCTGTAT
CCACCTCAATTTATCAGCTAAAGATTTACAAGACCCCAATTTGGTCAATAAAAGTATTTCTCTTGTTAAGGGTAATCATT
CATCGCAGAAGATAATGTTTGAGATAACCGAAAGCGCAATGATGACCAACGTAGAGCAAGCTAAAGGTGCCATGGCACAG
ATTACTGCCGCAGGTGGTACATTCAGTATTGATGATTTTGGCACGGGGTTTTCTTCACTAGAACTATTGCGAGACCTTCC
TGTTACCCAAATTAAAATTGACGGCTCATTTATCAACAGTATTCATCATAGCGATGCTGACTTGGCGATAGTTAAATCGG
TAATATTTCTGTCAAAGCACTTGAAATGTAACGTTGTAGCAGAAGGTGTAGAACGAAGTGCAACGGCAACATTATTGGCA
TCACTTGGTTGTGATCTTGCCCAAGGTTACTACTACAGTAAACCGATACCCATTTCATCTTTTGCCAATTATATCCAAGA
ACAACAATCAGTAAGCGCCGTAGCCAATCAAAATAGCTTTTAA

Upstream 100 bases:

>100_bases
AATGACTGCTCGTCCGTTTTTAATGTTCACCCTTACTAACCACAGGAAATAGCGATTGTTGCAGATATTGGCTTTATCTA
TGCTTATTTTAGGACTCGGC

Downstream 100 bases:

>100_bases
TGACTTGGATCATGTCTAATACTAAACTTTTGGCCTAATCTCTATCAACAACTGTTCGATTATTGAACGAACCTTAATGC
TAAAGTGACTAATCTTACTC

Product: diguanylate cyclase/phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>520_residues
MLVFSLRAVNKICIKDNNTGWRVLRGLIFFFVLGYLGVFYYLSKQSNLAVSDIIFCIIMFCGGGFVVLVTRLSLLSLVKV
EKLVINERSNALHDSLTGLPNRKYLMDSLSQHVNAGLPFSLLLIDLNRFKQVNDALGHYYGDLLLIEVGKNISEHLPDDS
QLFRLGGDEFAVIVTQVELEPLQHTINTIHLALESAFCIENYDLLVGASIGLSHFPILANEIGLLLQQADIAMYSSKKLA
TLYTIYDLTLENNAAEKMNISASLKRAIEQQEFELWYQPIINLRNNRLYGVEALIRWPRPDGSYTPPSVFIHIAEQTTLI
NQITDWVMQQVAKDVEHFESLGLSLCIHLNLSAKDLQDPNLVNKSISLVKGNHSSQKIMFEITESAMMTNVEQAKGAMAQ
ITAAGGTFSIDDFGTGFSSLELLRDLPVTQIKIDGSFINSIHHSDADLAIVKSVIFLSKHLKCNVVAEGVERSATATLLA
SLGCDLAQGYYYSKPIPISSFANYIQEQQSVSAVANQNSF

Sequences:
NA

Specific function: NA

COG id: COG5001

COG function: function code T; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA