Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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Identifier: 114563004

GI number:

Start: 2156724

End: 2160281

Strand: Reverse

Name: Not Available

Synonym: Sfri_1829

Alternate gene names: NA

Gene position: NA

Preceding gene: 114563015

Following gene: 114563000

Centisome position: NA

GC content: NA

Gene sequence:

>3558_bases
ATGTTTTCAAATTGGCTATTGGTAAGCGTAAGTATTGGCTATATCAGCTTATTGTTTCTTATTGCCTATTTAGGTGGTAA
ATATCGCCATAAATTATTAGAAAAACAAAATGCAATTATCTACGCATTATCGCTTGGTGTTTATTGCACCTCTTGGGGGT
TTTTAGGCACATCGGCACAAGCAGCAAATAATTCATTTACTTATATTTCGGTATATCTCGCACCAATATTATTATTTATT
TTTGCATGGCCCTTTATTCAACGCATAATAACAACAAGTCTCAAGCTCAAGATCACTTCCATTGCGGACCTACTTTCTGC
CCGTTTTGGTAAATCCCAAAGCTTGGCATTTGTTGTCACGCTAGTTGCGTTAATTGGTACTTTGCCTTATATAGCCTTAC
AGCTAAAAGCTATTGTTTACTCATACAAAATATTACAGCAAAATCAGGATCTTAATGTTTGGCAGATTGGTCTGGTTGTG
AGTGGTATTTTGGCAGGCTTCACGATTATATTTGGCATAAGAACCATAGATGTTACTGAGCGTCATCCCGGTGTAATGAT
TGCTATTGCTTTTGAGTCTGTCGTTAAATTAATCGCTTTTTTATTGGTGGGCCTCTTTGTTTCCTTCGTCATCTATGATT
CACCCATCGACATTTGGCGACTATCACAAAACAATATTTCATTTACACAACAATTTGATAGCAGCAGCCTGATCGGTATG
GTGGGTTTATTAATTATCGTGATGTCTGCCTTCCTATGTTTACCAAGACAATTTCAAGTAATGTTTGTTGAAATTAAGGA
AAAAAAAACCAGTAATTTAGCAAGATGGTTGCTCCCCATCTACATTATTGTTTTTGCTTTTTTTGCTGGCCCGATAGGCC
TTGCAGGGACATTAAATTATGGTCAATCAATAGATGCAGACGCTTATGTGTTGTTTCTTCCGGCCTATAACGGGCAAGTA
TGGCTTTCTTTATTTGCTTTTCTTGGCGCCATTTCTGCTGCTAGCTCTATGGTTATCGTGTCGACAATAGCGTTAAGCAC
GATGTTAAGTAACGAAATAGTATTCCCATTAATGTTCAAGTTAGCACCACGTAAAAATCATGATTTTCTACATTTTCAAT
CACGCTTATTACTGATCCGTAAAGCCCTTGTCATTGCAGTGATCACACTCAGTTATTGTATGTTACTACTTTCTCCTCCT
GACACATTAGCGTCATTGGGGGAAGTTGCATTTGGGGCTATCGCACAAATTGGTCCAGCTCTTTTAGCCGCTTTTTTCTG
GCGAAGAGCGACTCAAAAAGGTGTGTTATGGGGAATAGTAAGCGGGTTTTCTATCTGGACATTATTGAATTTATTACCAC
AACTTGGCTTCTACCAACATCCTTTAGCGCATACAGGCTGGCCTGAAACAACCATGGTGACACTCTTTGGCCTCTGCATT
AACATCTTAGTACTGTATATTGTTTCACTACTAACACGGCAAAGTATCCGTGAAGAAATGCAGAGTAAATTTTTTTATAA
AGAAGATAAAAATCAGCTCCCTTATTTACCTAAGCAACCTAAAGTTGATCTGCTCGAATTAGAATATCTCGTTGCACGCT
TTATAGGCCAAGAAAAATCAACCGATTGCTTTGCACAATTTAATCAATCACACAAAAATAAAAAACATAAAACCTACAAC
GAAGCCTTGTTATTTCATGCAGAAAACACTCTCGCCAGTGTTATGGGCTCAGCATCTGCAAAGCTCGTTATTTCCTTCGC
TTTAGGTGGTCGCGACATAGCATTTGACCAAGTAGCCCAAATTGTTAAAGACAATTCAACACAGCAGTTAGAATTTAGCC
GTTCGGTATTACAAGGAGCAATAGAGAATACCAGTGAAGGTATATCAGTCATTGACGGAAATTTAAATTTAGTCGCATGG
AATAAACAATATCTCGACATTTTTAATTATCCCAAAGATCTGGTTTATATCGGTTGCCCAATAAGCCAACTTATTCGTTA
TAACCTCGCTAATCAAAAACACTACATACTCGATATTGAAGCCCAAGTTCAAAAACGGATACAATTTATAAGGGCTGGTA
GTAAACATAAGTCAGAGCGAAAACTACCAAATGATAAAATCATTAACATTGAGGGGAACCCAATACCTGGCGGTGGTTTT
GTGATGATTTTCTCCGATATTACGGAGTTTCGTCAAACAGAGAATTACCTTAAAGAAGAGAACACCGACCTTGAAAGTCG
CGTATTATCACGCACTAAAGAATTAGAGCAAGCAAACTTAGAACTCGAAAACGCCAACCGTGAATTAGCGCATGCGCAGC
TTAAAGCAGAGCAAGCACATTTGAAAAAAAGTCAATATTTACGTGCCTGTAGCCATGACTTATTGCAACCATTATCCGCT
GCTCGACTGTTTTCATCTGCTGTATGTTTAAGTTCAAGAGTGTCCCGACAAGAACGACAGCAAATAAAACAAATAGACAA
TTCACTCGAGATAGCAAACAATTTACTCTTAGACTTAAATGAAATAGCCCGTATCGAAAGTGGCAATATAATCCCGGATA
TTTCGATCATCTGTGTTGAACAATTATTTTCTATGTTGCAGTCAGAGTTTTCAGTGCTAACTAAAGATTACCATATCGAT
TTTCATTGTCATTCAAGTAAGTTATACATCAAAAGTGATTTAACGTTATTAGTAAGAATTGTGCAAAACTTCCTAAGTAA
TGCCTTTCGTTATGCTAACCATGGCAAGGTATTATTAGGCTGTCGTCGTAAAGGTCAAAATTTATGTATACAGGTACTCG
ATAATGGACCAGGAATACCTGAAGATAAGCAACAACAAGTATTTGAACAATTCACTCAGTTATCAACAAATTTGGTAGGA
CCTAAAGGCTTAGGTTTAGGACTAAACATAGCACAAAGTTTAGCCAACATTTTGCAGCATGACCTTGGACTCATCTCAAA
AGTAGGATGCGGTTGCTTATTTAGCGTTGAAGTTCCCATTGCCAAAGAGCCAAAAATAATACAAGCAAAAGCTACTCGTG
CCAGTGCAACTTTACAAGGGGTAGGCGTACTTTGCATTGACAACGAGATGGATGTAATTTCGGGCATGAGTGACTTATTA
ACCGCGTGGAAATGTCGAGTTTTTACTGCCCGCACTGCTAAGCAGGCTCTTGAAATTTATCAGGCTCACGAAGAAGATAT
CGATATATTATTAGTAGATTATCAATTGGTTGACGAAAAGCAAAGTGATGATCTGCAATACAAAAACTCACACAAAAGAA
CCAATTTCTCAAATAATCACAATAAGAATAATCGCTGTGCTAATGAAAATAGACTCAATGGCATTGAGTTAATTGCTTGT
CTACGCGCGAAAAGTCATTACCCACTACCTGCAATATTAATTACTGCGACAACAGATGAGTCCGTATTAGTACAAGCACA
ACAAGCTGATATTGGCTATTTAAGGAAGATCATAAAACCACTCGCTTTACGTGCTTTAATGAGCTCATTATTGACGAGAA
AACTAGAGCAGAATTACATTCCTAACTCATTCAATTAG

Upstream 100 bases:

>100_bases
CCTTTAGTCCAACTCCGTATAATTAATCTTGTGAGGGAAAATAGCTAAAGTTAAGATGAACAAATAAAATAAAATCAACT
GGCGTATTAATAAGGAATAT

Downstream 100 bases:

>100_bases
CACAATCGCTACTGTGTAAAAGATGCATTTGCCATTTGACGATCATTTAATAGAATAACGGCTTGTGTGCGATTTTTTAC
GCCTAGCTTTAAAAATATAG

Product: periplasmic sensor hybrid histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1185_residues
MFSNWLLVSVSIGYISLLFLIAYLGGKYRHKLLEKQNAIIYALSLGVYCTSWGFLGTSAQAANNSFTYISVYLAPILLFI
FAWPFIQRIITTSLKLKITSIADLLSARFGKSQSLAFVVTLVALIGTLPYIALQLKAIVYSYKILQQNQDLNVWQIGLVV
SGILAGFTIIFGIRTIDVTERHPGVMIAIAFESVVKLIAFLLVGLFVSFVIYDSPIDIWRLSQNNISFTQQFDSSSLIGM
VGLLIIVMSAFLCLPRQFQVMFVEIKEKKTSNLARWLLPIYIIVFAFFAGPIGLAGTLNYGQSIDADAYVLFLPAYNGQV
WLSLFAFLGAISAASSMVIVSTIALSTMLSNEIVFPLMFKLAPRKNHDFLHFQSRLLLIRKALVIAVITLSYCMLLLSPP
DTLASLGEVAFGAIAQIGPALLAAFFWRRATQKGVLWGIVSGFSIWTLLNLLPQLGFYQHPLAHTGWPETTMVTLFGLCI
NILVLYIVSLLTRQSIREEMQSKFFYKEDKNQLPYLPKQPKVDLLELEYLVARFIGQEKSTDCFAQFNQSHKNKKHKTYN
EALLFHAENTLASVMGSASAKLVISFALGGRDIAFDQVAQIVKDNSTQQLEFSRSVLQGAIENTSEGISVIDGNLNLVAW
NKQYLDIFNYPKDLVYIGCPISQLIRYNLANQKHYILDIEAQVQKRIQFIRAGSKHKSERKLPNDKIINIEGNPIPGGGF
VMIFSDITEFRQTENYLKEENTDLESRVLSRTKELEQANLELENANRELAHAQLKAEQAHLKKSQYLRACSHDLLQPLSA
ARLFSSAVCLSSRVSRQERQQIKQIDNSLEIANNLLLDLNEIARIESGNIIPDISIICVEQLFSMLQSEFSVLTKDYHID
FHCHSSKLYIKSDLTLLVRIVQNFLSNAFRYANHGKVLLGCRRKGQNLCIQVLDNGPGIPEDKQQQVFEQFTQLSTNLVG
PKGLGLGLNIAQSLANILQHDLGLISKVGCGCLFSVEVPIAKEPKIIQAKATRASATLQGVGVLCIDNEMDVISGMSDLL
TAWKCRVFTARTAKQALEIYQAHEEDIDILLVDYQLVDEKQSDDLQYKNSHKRTNFSNNHNKNNRCANENRLNGIELIAC
LRAKSHYPLPAILITATTDESVLVQAQQADIGYLRKIIKPLALRALMSSLLTRKLEQNYIPNSFN

Sequences:
NA

Specific function: NA

COG id: COG0591

COG function: function code ER; Na+/proline symporter

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA