Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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Identifier: 114562860

GI number:

Start: 1987074

End: 1990952

Strand: Direct

Name: Not Available

Synonym: Sfri_1684

Alternate gene names: NA

Gene position: NA

Preceding gene: 114562859

Following gene: 114562861

Centisome position: NA

GC content: NA

Gene sequence:

>3879_bases
ATGAGTTTTAAAGACCAAGTCATTAACCTGATCATTCAGGGCAAAGATTTATTTTCCAGTGAAGCCAAGAAGTCTGAAAA
AGCGGTTGCTGAATTAGCATCACAAAGCGAAATCCTTAATGCCCGTTTAAAAGAGTTAGAAGATTTACAAGCGGCCGCCA
ATTCAATTGATGGTTTAACCGCATCAATCAGTAAAGGCGAACGTGCATATAAAGATAACTCGGTTGCACTCGACAAGTTA
GTCACCGAACAAAAGGCAGCAGTTAAAGAATTAAAACAACTTGAGGCTGCTCAAAAGGCGGCTGAAGGTTCAACCAATCA
ACTTGAGCAAGAATACAATCAAGCTCAAGCCGCATTAGTTAAATATGAAACCGAGCTACAACAAGCCCGGGTTGAAGTAG
CAAAGCTCAGTACCGAGCAACAACAAGGTGCCACGGCCAGCAAAGAACAAGCGACCGCATTAACTAAAGCCAGTACCGAT
TTACAAAAATTAACCAATGAACAAACCAGCGCAAAAAATGCTGCCACCGAACTGGCAACTGCGTTAGATAACCAGCGCCG
AGATCTGCTTGAGGTTAGCACCGCCACCGAAGCTGCTAGTCGAAATAAAGCTGATTACACATTAAAGGTTAAAACTGCTC
GCACCGAGGTAAACCAGCTAGCGAGCAGTATTAACAAAAACAAAACTGAATTAGACAAAAACACTGCCAGTTTAAAAAAT
GCCGGCATCAGTACGGATAAGCTGGCAGATGCCAGTAAAGAATTAAAGCAGCAACAAGTCGCCGCTGAGACAGCGTTAAG
CGGTGTTAATAACAAGCTTGAACGCCACAATAAGTTATTAACAGAATCGAAAAAACAAGCCGGTGATTTTGGTGGCAGCA
TTAAAAGTGCAACTGTCTCATTGGTTGCCATGGCCGGAGCCTACATTGGTGTCGATAAGTTATGGGAAAGCCTAAAGTCG
ATCCTCACCGCAGGGGATGAAGCAAAAGCCTTTGGTGTGCAAATGAGCGCCATGATGGGCAGTATTGCCAGTGGTGAACA
AGCGACAAAATGGATTAAAGACTTTGCCAATAATACCGGCACAAGGTTAGATACTGCCAAACAAGCCTTTGCCTCATTGA
AAACATTTGGCATTGATCCAATGAATGGATCATTGCAGTCGATGGTTGATTACAATGCACGTTTAGGTGGCAGCCAAGAA
AAATTAGAAGGGATTATTTTAGCGGTTGGCCAAGCATGGGCTAAGCAGAAACTGCAAGGTGAGGAAATCTTACAGCTGGT
TGAGCGCGGCGTGCCCGTGTGGGACTTGCTTGAAAAAGTCACCGGTAAAAACGTGACGCAGTTGCAAAAAATGAGCGCAG
CAGGCGAGTTGGGCCGCGACGTCATGAAGCAACTGTTTGACGAAATGGGCAAGCAAGCCAACGGCCAAGCATCAAAAAGC
TTAGACCTGTTGGGTGGTCAGATTAATTTAATCTCAAACAAGTGGACCGAGTTTAAGCAAATTATTGCCGATTCTGGTGC
GTACCAGGTGGCGGTTGATTTACTTAAAGACATTAACGCAAGGTTTGATGAATTAAATAAAGGCGGGAAGATAAAGGAAG
CCGCACAGGATATCAGTGATTTTTTCACCACCATACTTAAAGATGGTGGCGATAGCATTAAGACTACACTCGAAAATATT
ACCGCATTCACAACAGGTTTAAATGTTGTTTCTGGTAGTTTGCGCGCGTTGTTCAATGGTTTGTCGCTCATGGTATCCGC
TTTTGGTGCTGCAGTTGCTGGTGCGTTTGCCATGTTCCCACTAGGTATGGCAAAAGCGCTGAGTGTTTTTGGTGATAATG
CTCTATCAAATAAATTCCAAGAAGCCGCTGATGGATTGTTATCTATATCTAAGGCGTATGTTGAGCAAGTTAAACAAGAT
GCTAAAGATGTTGCGACCGCGCTTAAACAAGCCGGTGTAGATATTCAAAGTGATTCTGATGACACGACAAAAACACAGGT
TGAGAATGCTGAAAAAGTTAAAGCAGCCATGCAATCACAAGCTGAGGCACGCTATAGCGCTTATCAAAAGGATGTTGCAA
CCAGTGAGAAGTTATCAGGCTTAGCTCAAAAAGAAGTTGATGATTGGAAGGCTCGACAAAAGGCTGCAGAAGACCATTAC
ACCAAACTGAAAAGTAGCGGTACCGCTACGTTAGAGGAAATTGAAGCCGCCGAAACAAGGTATGGTAGTGCCACCTTAAA
AGTAACTGATTTGTTGGTTGCTCAATCTTCTGCCCAGCGTGATTTAACCGATTCGCAATTAAAGCTAAATGCGGCGACTG
TGGTTTTTCTATCTGCTCAAAGCGAACTTGCCGACAGAGAACTAAGCAAGGTTCGCGATGCTTACATCGAGGGCACTACA
TCAGTTGAGGACTATGAAAAAGCCCAAGCTAAAGCGAAAACTGCGGCAGAGGCATTAGCCAAAGCGCAAGGTGAATTGGT
TAACTCAACAGACGCGCAGACAAGGGCTGTTAATGATTATGAAGCGGCGATGGAGCAAGCCAATGTCACTACATTAAAGT
CGCTGCAAGATTTAGCGGCCAAAGCAAAAAAAGCCTACGACCAGACTAGTGAAGCCATTAAAAATGGCGTCGGCTCAACT
TATGACGCTGAGCAAGCCTTTTTAAAATATGCGGACGCATCGATAAAAGCCGCGGCGGCTGGTGATAAGCAGGTCGAGGC
CAGTATTCGTCAACAAGCTGCTAATCTTGGCTTGAGCGATAATATTGAGGATTTAATAAAGCAGTATTATCGGCTAAAAG
ACTCGCAAAAGGATTTGGTTGATGATGTTAATAATACTGAAGATCAAGTAAACAATGCGAACCAAGGCATTGGCACTACC
ATGGAAAACACCATGGGGGTGGTGGTTAAAAGTGCGCAGCAAGCCGGTTCTGCATTAGCCAGTGTTGCCAAGTTCTTCAC
CGATTATTTAAAAAGTGTTACAGCCGAAGTCGCTGAACTCAGCACGGGGGCTGTGGCTTACTTTAAGTCGATACTGTATG
GCCAAACGCTATTAACTGACTCAAGCAGTGAACTAGAGAAAACCATTAAGATTTACAAAAATCTAAGTGGTGAGATTAGT
GATCTGCTTGATGTGCAAGCCAAATCAATCGATTTTACTGGCATTAGTAATTTTGCCCGTAAAGCCGAGATAGCCGGTAA
GCAAGCGCAGGCGGCCTATTATGGCCAACGCATTGAACTGTTAAAAATGGTTGATGCCCTTGATGCTGCCGAAAGTGGCA
ACATTGGCTTAATCAATAGTGCCGAACGTGCGGCTAACTCAATGAACTTGATGAACGATCAAGACTTGGGAGTGCTGCGC
ACGGCCATTGATTCGGCTAAATCGAGCATGGACTCTCTACGTGATAGTGCTCAATCAACCCTCGATACGTTGCAAGACGA
ACTAGACGGTTACCTTGGCCGCCAGGATGAAATCGAAAAGCGCCGTTATCAGCAAGAGCTAGCCGATATTAAAACCCAGT
TAGCTCAAGCTGAATCAACGGGCGACAAGACACTCATCACCCAACTGAGAGAAGCCGAAAAAACGCTAAACAAGGTTTAC
GCTTATCGCACCGCCGAAATCAAAGCCCAGCAAGACGCTAGCGAAAAGCAAGCCATTAGCGACGCAGCTACCACCAAACA
GCAATCTACCGCCAGTGCTGTGCAAACCAATGTGACTACCCAAACCCAGCCAACCATTACAACGGCCGCCGCGAATAGTA
GCGACACCGTAGTGCTGCAGCTGCAAGTGGGTAACCGCACGTTTGATGCACAAACCAAGCGCAGTATTGTGAATGAACTT
GTGGCCGAAATTAAGCGTTTGCAGTCGGTGGGTGGTTAG

Upstream 100 bases:

>100_bases
TCTTTGTGCGTAGCGCAGCGTAAAACGTTTTACCTCAACAACCCACAACAGCAATGTTGTGGGTTTTTTATTTTGTTTTT
TAACGCTAATTTGGTGATGT

Downstream 100 bases:

>100_bases
CCGCTCGTTTGCCGTAACACTACATAAAGAGGCGCTATGTTTAACACCACTATCGACACCATTGTGTTGACCGAACCATT
GCACTGGCTGAACCGCAATA

Product: phage tape measure protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1292_residues
MSFKDQVINLIIQGKDLFSSEAKKSEKAVAELASQSEILNARLKELEDLQAAANSIDGLTASISKGERAYKDNSVALDKL
VTEQKAAVKELKQLEAAQKAAEGSTNQLEQEYNQAQAALVKYETELQQARVEVAKLSTEQQQGATASKEQATALTKASTD
LQKLTNEQTSAKNAATELATALDNQRRDLLEVSTATEAASRNKADYTLKVKTARTEVNQLASSINKNKTELDKNTASLKN
AGISTDKLADASKELKQQQVAAETALSGVNNKLERHNKLLTESKKQAGDFGGSIKSATVSLVAMAGAYIGVDKLWESLKS
ILTAGDEAKAFGVQMSAMMGSIASGEQATKWIKDFANNTGTRLDTAKQAFASLKTFGIDPMNGSLQSMVDYNARLGGSQE
KLEGIILAVGQAWAKQKLQGEEILQLVERGVPVWDLLEKVTGKNVTQLQKMSAAGELGRDVMKQLFDEMGKQANGQASKS
LDLLGGQINLISNKWTEFKQIIADSGAYQVAVDLLKDINARFDELNKGGKIKEAAQDISDFFTTILKDGGDSIKTTLENI
TAFTTGLNVVSGSLRALFNGLSLMVSAFGAAVAGAFAMFPLGMAKALSVFGDNALSNKFQEAADGLLSISKAYVEQVKQD
AKDVATALKQAGVDIQSDSDDTTKTQVENAEKVKAAMQSQAEARYSAYQKDVATSEKLSGLAQKEVDDWKARQKAAEDHY
TKLKSSGTATLEEIEAAETRYGSATLKVTDLLVAQSSAQRDLTDSQLKLNAATVVFLSAQSELADRELSKVRDAYIEGTT
SVEDYEKAQAKAKTAAEALAKAQGELVNSTDAQTRAVNDYEAAMEQANVTTLKSLQDLAAKAKKAYDQTSEAIKNGVGST
YDAEQAFLKYADASIKAAAAGDKQVEASIRQQAANLGLSDNIEDLIKQYYRLKDSQKDLVDDVNNTEDQVNNANQGIGTT
MENTMGVVVKSAQQAGSALASVAKFFTDYLKSVTAEVAELSTGAVAYFKSILYGQTLLTDSSSELEKTIKIYKNLSGEIS
DLLDVQAKSIDFTGISNFARKAEIAGKQAQAAYYGQRIELLKMVDALDAAESGNIGLINSAERAANSMNLMNDQDLGVLR
TAIDSAKSSMDSLRDSAQSTLDTLQDELDGYLGRQDEIEKRRYQQELADIKTQLAQAESTGDKTLITQLREAEKTLNKVY
AYRTAEIKAQQDASEKQAISDAATTKQQSTASAVQTNVTTQTQPTITTAAANSSDTVVLQLQVGNRTFDAQTKRSIVNEL
VAEIKRLQSVGG

Sequences:
NA

Specific function: NA

COG id: COG3941

COG function: function code R; Mu-like prophage protein

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA