| Definition | Shewanella frigidimarina NCIMB 400, complete genome. |
|---|---|
| Accession | NC_008345 |
| Length | 4,845,257 |
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Identifier: 114562721
GI number:
Start: 1838889
End: 1840994
Strand: Reverse
Name: Not Available
Synonym: Sfri_1545
Alternate gene names: NA
Gene position: NA
Preceding gene: 114562726
Following gene: 114562719
Centisome position: NA
GC content: NA
Gene sequence:
>2106_bases TTGCTCATCAATTGTTACCCAATACAATTTTTTGCCAATGTGCAATTTGTATTAGGTAACACGGTGACTGTCATTGCTGC GGTTTTATTGGGACCTTGGTATGCATTTCTAACCGCTATGATGGCATCAACTGGATTAATGTTGATATGGGATAGCCCAC ATGTGTATTTGTTTTTTGGGCTTGAAGCATTATTTTTAGGTTATGCCAGACGCCGTGATATCTATGCTTTATATGCTGAT GCAGCATATTGGTTATTTATTGGTGCACCAATGGTATATTTATATGTGGTGCTATTGATGGACATTCCCCCCTCTCACTT AGGCTTTATTATTTCAAAGCAAGGCATCAACGGACTGATTTATACCAGTATTGCATCACTACTGATTTTAGCGATACCAA AGTTATGGTTTTTAAAAGACAAAGTTAAAGACCGCCATCGTAGACAATTAAGTTCACAACTGACCTATTTCTTCACCTTA ATGGTGACCTTAACGTTATTGTTTTCGGCGTTAATCTTTAATTTTTATTTTTTAGAACGTCAACAAATCATGTTAAAACA AAACATGACTGAAGCGGTTGCCCACCTTTCGACCTCAGCACAGAATTACATTGAAAACCATAAAACCGTCATTCAAAATA CTGCAAGCCAATTAGACTTAGTTGCAGATACGCCTGAAAAATGGCAAGACATTTTATCGAGTTCACATCAAAACTATTCT GGTTTTATCAGCATGTTGATTGCTAATCCGACAGCCAATATTGTCGCTGCTAGTCCAGTATCAAGACTCATGACAAAGCA AATATCTGAACAAAGCGTCAACATTAAAGACAGAGATTATTTTATTGAGTCATTCTATAATCAGCGCCTATTCGTATCAT CTGTCTTTCTCGGTCGCGGATTTGGAAATGACGCAATTATTGCTATGAGTGCGCCCTTTTATCTCGATGAGCAACACACA CAAGTTGCAGGAATCGTAGAAGGGTCACTTGATCTGACCCACTTTGCACATATTGACCAAGTTAATGAATATACCGACGA TGAATCTATAGTGATGGTTGATGAACAAAATCAAATAATTTACGCATCAACAAAACTCAACTTGAAACCACTCTCACAAT TTAATTTTGCAATAAATAAAGGCGTATATCGAGCCAATCTTGAATTAATCAATATTCATAATACGACCTCAATTGTGCCT GAATACATGTATGCTCACCGGGAACTCGATAATGGTTGGACCGTGTATATTTTAAAAGAATTTTCGCCGTTACTAAAACT CGCTGAAGAACAAATGTTCAGTAGCTTTATCATGCTGTTGATTGCATTGTTGTGTACCTTCTATATTTCAAAGAAGCTCA GCGCGTTGCTAACGGTGCCATTAGAAGCTGTCGCCAATCAATTCAGTCAGTCATATTCAGATCCAGCAAAAACATCGGCA ATTGACGATAGCTCACCAAGAGAGGTATTCAGTCTGTACCAACGGTTAGCAGCCAGTAAACAACAACTCATCGCGCATCA AGTCGAATTAGAAGAAACAGTTGCTCATCGTACGGCGGAATTAGAAAAGGCCAACAAAAAACTCACAGAACTGGTTGATA GAGATCCGTTAACCGGCTTATATAATCGCCGTTATGCTGAACGTAAATTTGGTGAGTTAGTGGATTTTTGTTTGCGAAGC GATCAGGCCATTACTGTTGTATTGCTTGATTTAGACTTCTTCAAAAAAGTGAATGACAACTATGGCCATTTAGCTGGTGA TGAGTGCTTACGCAACGTGTCACAATTATTACAGAAATACTTTAAACGAGACATTGATATTGTGGCCCGCTACGGCGGAG AAGAGTTTTTGCTTATTCTGCCTTTGTCCAATACCTTACATATTGAACATCATCTCAATGGTTTTAGAGAGGCACTGTCG CAATTAGACATCATATCACCTGAAGATAAACAGTCATTTAACGTGACGGTCAGTATTGGTGCTATTACGGCAAGTGCTGA TTATGAAGTAGAACTGGATAAATGGATTAAAGTCGCTGATGATAACCTCTATCAGGCAAAGCAACAGGGACGTAATCGAA CAATCATTAACATCATTAATGACTAA
Upstream 100 bases:
>100_bases AAATCTTTTTAGAATACAAATAATAAGGATATTTTTTTTGACCTTGCCACGCATTAATCAACAACATCTTTTATTCTCGA TCATCTTGGGAGTCGTTGGA
Downstream 100 bases:
>100_bases TATTTAGCGGTTTATTGCCTAATGGTGACTCAGGTTGATACCCTTGAGTAAACTCATCAATTCGAGTCATCATGTAAGGA TAAAATGGATTCCATTTCTG
Product: diguanylate cyclase
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>701_residues MLINCYPIQFFANVQFVLGNTVTVIAAVLLGPWYAFLTAMMASTGLMLIWDSPHVYLFFGLEALFLGYARRRDIYALYAD AAYWLFIGAPMVYLYVVLLMDIPPSHLGFIISKQGINGLIYTSIASLLILAIPKLWFLKDKVKDRHRRQLSSQLTYFFTL MVTLTLLFSALIFNFYFLERQQIMLKQNMTEAVAHLSTSAQNYIENHKTVIQNTASQLDLVADTPEKWQDILSSSHQNYS GFISMLIANPTANIVAASPVSRLMTKQISEQSVNIKDRDYFIESFYNQRLFVSSVFLGRGFGNDAIIAMSAPFYLDEQHT QVAGIVEGSLDLTHFAHIDQVNEYTDDESIVMVDEQNQIIYASTKLNLKPLSQFNFAINKGVYRANLELINIHNTTSIVP EYMYAHRELDNGWTVYILKEFSPLLKLAEEQMFSSFIMLLIALLCTFYISKKLSALLTVPLEAVANQFSQSYSDPAKTSA IDDSSPREVFSLYQRLAASKQQLIAHQVELEETVAHRTAELEKANKKLTELVDRDPLTGLYNRRYAERKFGELVDFCLRS DQAITVVLLDLDFFKKVNDNYGHLAGDECLRNVSQLLQKYFKRDIDIVARYGGEEFLLILPLSNTLHIEHHLNGFREALS QLDIISPEDKQSFNVTVSIGAITASADYEVELDKWIKVADDNLYQAKQQGRNRTIINIIND
Sequences:
NA
Specific function: NA
COG id: COG2199
COG function: function code T; FOG: GGDEF domain
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA