| Definition | Shewanella frigidimarina NCIMB 400, complete genome. |
|---|---|
| Accession | NC_008345 |
| Length | 4,845,257 |
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Identifier: 114562397
GI number:
Start: 1431202
End: 1437159
Strand: Reverse
Name: Not Available
Synonym: Sfri_1219
Alternate gene names: NA
Gene position: NA
Preceding gene: 114562398
Following gene: 114562396
Centisome position: NA
GC content: NA
Gene sequence:
>5958_bases TTGAGTTCTCAAGCCACCCCTAAAATAGCCATTGTCGGTTTAGCCAATCAGTATCCCGACGCGGATACTCCCGCTAAATT TTGGCAAAACTTATTAGACAAAAAAGATTCACGCAGCCAAATCAGTGCGAGCAAACTCAATGCTTCACCGAGTGATTACT TGGGTGTACAAGGCGAATCGGACCGTTTTTATTGTGATAAAGGCGGCTACATTCAAGACTTTCAATTTAACCCTCAAGGG TATCGTATTGAGCCCGACGCATTTACAGGTTTGGATGACAGTTTCTTGTGGGCAACCGACACAGCCCGAAATGCGTTAAC CGACGCGGGTATAGACCTTAGCAATAACGTGCTGCAACGCACCGGCATTGTCATGGGCACTTTATCGTTCCCTACAGCCA AGTCTAACGAGTTATTTGTACCGCTCTATCACAGCGCGGTCGAAAAAGCCTTACAGATTAAACTCCAGCAGCCAAACTTT AATCTGCAATCGTTTAATCAAGCATCGCAAAACAATACCGCAGAAAATGCCAATAACAATAATAATGTAGCGCCTAAAAC GGTTAACTTACGTAATGGTGCCATTGCCCATAACGCCTCTAAAATTGTTGCCGATGCTTTGGGATTAGGTGGTACGCAGC TAAGTTTAGATGCCGCCTGTGCAAGTTCGGTTTACGCATTAAAATTGGCCTGCGACTACTTGCATACCGGCAAATCAGAC ATGATGCTGGCTGGCGCGGTGTCGGGAGCCGATCCGTTTTTTATCAATATGGGCTTTTCGATATTTCATGCTTACCCAGA CCACGGTATTTCCGCCCCATTTGATAGTAACAGTAAAGGTTTGTTCGCTGGTGAAGGTGCAGGGGTATTAGTGCTCAAAC GCCTTGAAGATGCCGAGCGTGATGGCGACCATATTTACGCTTTGGTCAGTGGCATTGGCTTGTCGAACGATGGTAAAGGC CAGTTTGTGTTAAGCCCAAACAGCAAAGGCCAAGTGCAAGCATTCGAGCGCGCTTATCGTGATGCCGCCGCAATCGACCC AGGCATAACCCCTGCCAGCATTGAAGTGATTGAATGTCATGCTACGGGGACACCATTAGGCGACAAAGTTGAATTAACCT CGATGGAACGTTTTTTTGAAGATAAACTTCAAGGTAGCGCCACGCCATTAATTGGTTCCGCAAAATCCAATTTAGGCCAT TTACTCACCGCAGCAGGCATGCCTGGGATCATGAAAATGATTTTTGCGATGCGTGAAGGCGTGTTGCCACCGAGTATTAA TATCAGTGCCCCTATCGCCTCACCTAATGGCTTATTTGGTCAAGCGACTTTGCCAAATGATGTGCTGCCGTGGCCCGATA AGGTCGGCAATAAAGCCCGCCATGCTGGCGTATCAGTATTTGGTTTTGGCGGTTGTAACGCCCATTTATTACTTGAGTCG TATCAAGCTAAAGCCGTTACTGACAAGACGCTGAACAATCATTCTCAAAATAATAATTCTCTAAGTAATAACGCTCTGAA CAATAACATTCAAACTCGCAGCACAGCGCTAGTTGATGCAGAAACGCCAATGCACATTACCGGCATGGCGGCGCATTTTG GTCAATGTAGCAGTATTGATGCACTGGCGAGTAAAATCATCGCCAAACAAGCCATCTTTAGCCCGCTACCCACTCAGCGC TGGAAAGGCTTAGACAAACATCCTGAACTATTAGCCCAATATGGCATCACAGATGTACCACAAGGCGCGTATATCGATCA GTTCGATTTTGATTTCTTGCGCTTTAAAGTGCCACCCAATGAAGATGATCGCTTAATATCGCAACAACTACTGTTGATTA AAGTCGCCGATGAAGCTATCGCCGATGCCAAGCTAACACCAGGCAGTAAAGTCGCGGTATTAGTCGCCATGGAAACCGAA CTCGAACTTCATCAATTCCGCGGTCGAGTTAACTTACATAGCCAAATAGCTCAAAGCCTTAACGCTCAAGGTATTCAATT ATCTACAGCGGAATATGACAGCCTTGAAACCATTGCGATGGACAGTGTCCTCGACGCCGCTAAGCTTAACCAATACACCA GTTTTATTGGCAATATTATGGCATCGCGGATAGCCTCACTATGGGATTTCAACGGCCCAGCATTTACGATTTCTGCGGGC GAACAGTCAGTTAACCGCTGTATAGATGTGGCGCAAAACCTGTTTGCGTTAGGGTCGTTACAAGAACCATTAGATGCCAT CATTATTGCCGCTGTAGACCTGTCTGGCAGCATTGAAAATATGTTGTTCAATACCGCAAAGCTTAACGCCAAAGGATTGC GTTCAACCGATTGGCTAGTGGGTGAAGGGGCTGGCGCGCTAGTGCTGCAACAAACCAGTGCTGTACACTCTCAGCTTGAT AGTTACGCCAGTATCGACAGCGTTAACTTTACGCCATTGTCACAATTACCAACACAACTGCCAACACAATTACCAACTGA GTTATCGGCAGACATTGTTGAGTTAAACCAATCGCCGGAATGCATATTAACAACTCAAGGTCGACAGTTTACCCAAAGAT TAACTGATGCAGCTACAGCGGTCAGCTCAGCACCGTTATTGAGTAAAGCCCATGATATTCTCGGTCATACATTTGCCGCT TCAGGCATGGCCAGTTTGCTGCACGGTTTAGTGCAAACTCGTCACATCGACAAACCGTCTATCAATGCCAGTGTATTCAC CAGTAGCGACAATCAATACTCACAAGTTAATCTGTCGGTTTCTGCGGCGCAACAACACGCATTGCACGCTCGACTGGGCA ATAATTTAACTCAACAACTGGCCACGGGCAGTAAGTTAAGTTTAATTAAACAAGTCAGTTTAGGTGGTCGCGATATTTAC CAACACATTATCGACAGCCCACTTGATACCCTCGACAGTATTATTAATCAATGTGCTGATATTGCCCCTACTGTGGTCAG TTCCACTGAAAGTAAGCAACCAACTATTGGTGATAATAGCCCTCTTAGCGTCAATAATAGCGAGAATATCGCCGAGCCTC TTATGTCAGAAAATATGCCAAATAAAACGATTCCAAAGCAACCAAGGGTTGCCAGTATGACAAATCATACGATTCCACCA GCACATTTAACGGCATTCCAACAAAATCAGTGGTTAGCACAACAAGCGCATTTAGCTTATTTAGCCAGCCGTGATGCAGG CTTAAAAGTGGCAGACAGTTTATTACGGTCCCAATTGGCTGGTTTGAGCCATCAACCAACTGCGACTCAAGTCGCGTCTC CGGCGGCTAATACTTATGCGGTTAATGCTGCGGTTCAAACAGTGGTTAAGAGTGAAGCAATTAGCCCCGCTAGGTTGATC CAACCTAATCATGCTTGTGTGCCAGCTTACACTGCGCCTATTCCAGCGGATAAACCGTGTATTTGGAATTATGCTGATTT AGTTGAATATGCCGAAGGCGATATCGCTAAGGTGTTTGGCCCAGATTACGCCATTATCGACAGTTACTCGCGCCGAGTTC GCTTGCCGACCACAGATTATTTATTGGTGTCGCGTGTGACTAAACTCGATGCCACCATGAATCAATACAAACCGTGTTCA ATGACCACAGAATACGACATCCCCGTCGATGCGCCGTATTTAGTGGATGGTCAAATTCCTTGGGCTGTAGCGGTAGAATC GGGTCAGTGCGATTTAATGTTGATCAGTTATTTAGGTATCGACTTTGAAAACAAAGGCGAACGAGTTTATCGCTTATTAG ATTGTACTTTGACCTTCTTAGCCGATTTACCTCGTGGCGGCGACACTCTGCGTTACGACATTAAAATCAATAACTTTGCC AGCAATGGCGACACGTTATTATTCTTTTTCTCTTACGAGTGTTTCGTAGGCGACAAGATGATCCTAAAAATGGATGGTGG CTGTGCAGGCTTCTTTACCGACCAAGAGCTGGCCGATGGTAAAGGGGTTATTCAAACTGAAGATGAAATAAAACATCGCC AACAAGTGATCAACAATCCAAATAAACCAACCTTTACCCCATTACTCCACTGTAGCCAAACGGCATTTGATTATGGTCAA ATCCATCATTTATTGACTGGTGATATTGGCAGCTGTTTTGGTGGCGACCATGTCGCGCACCAACTGCAAACTGGAATACA AAAATCGCTTTGTTTTGCCTCAGAAAAATTCTTAATGATTGAGCGAGTGAGTCAATTACAAACACAAGGTGGCGCGTGGG GCTTAGGCTTACTCGAAGGTCATAAACACATTGCGCCAGACCATTGGTATTTCCCTTGTCATTTCCAAGGCGACCAAGTG ATGGCAGGCTCGTTAATGGCAGAAGGTTGTGGCCAGCTATTACAGTTCTTTATGATCCACATCGGCATGCATACTCTAGT AGAAAATGGCCGATTCCAACCATTGGAAAATGCTTCGCAAAAAGTTCGCTGTCGTGGCCAAGTGTTACCACAAACGGCTG AGCTGACCTATCGCATGGAAGTGACTGAAATCGGTATTCATCCCCGCCCGTATGCCAAAGCCAATATTGATATTTTACTC AATGGAAAAGTCGTGGTCGATTTCCAAAACTTGGGTGTGATGATTAAAGAAGATGCCGAATGTACTCGTTATCCGCTTAT CTCGTTAGACGCTAGCCCTGCAGTTGATTCAAACGCTAGCAGTAAAGTGATTGCTAACAAAGCGCCGTTAATGGCGCAAA TTCCAGATTTAAACGCCCCGACTAACAAAGGCGTTATTCCACTAAAACACGTTGAAGCGCCCATTGTAAGCGCCGATTCA AAGTACGCTAATCGCGTGCCTGATACCGTTCCATTTACCCCATACCATATGTTTGAGTTTGCTACTGGCGATATCGAAAA ATGCTTTGGCCCTGACTTTAGTATTTACCGCGGACTTATCCCACCGCGCACACCTTGTGGCGACTTACAGTTAACCACTC GCGTGGTTGAAATTAACGGTAAACGCGGCGAATTGAAAAAGCCATCATCGTGTATAGCAGAATACGAAGTGCCGGCAGAT GCTTGGTACTTTGCTAAAAACAGCCATCAAGCGGTAATGCCTTATTCGGTGTTAATGGAAATTTCATTACAACCCAATGG CTTTATTTCTGGCTACATGGGCACCACCCTAGGCTTTCCTGGGCAAGAGCTATTTTTCCGTAACTTAGACGGTGGCGGAC AATTATTACGTCATGTGGATTTACGCGGTAAAACTATCGTCAATGATTCAAAGCTATTATCAACCGTCATTGCTGGCAGT AACATTATTCAAAGCTTCACCTTTGAGTTAAGTGTCGATAACGAGCCTTTTTACACAGGTAGCGCGGTATTTGGTTACTT TAAAGGTGATGCGCTTAAGAACCAGTTAGGCATAGATAACGGCAAAATAACTCAACCATGGCATGTTGATAACAATGTCA TGGCAGACATCAGCGTTAACTTACTGGATAAACAGTCACGGGTATTTACTCCGCCAACTAGCCAACCGCATTATTGTTTA GCGGGTGGCCAGCTTAACTTTATCGACAAAGCAGAAATTGTTGAAGCGGGCGGGAAATACGGTAAAGGCTATCTTGCTGC GTCACGCACTATTGACCCTAGTGATTGGTTCTTCCAATTCCACTTCCATCAAGATCCGGTAATGCCAGGTTCATTAGGTG TTGAAGCTGTGATCGAGTTAATGCAAACTTACGCCATCAGCACAGACCTAGGTAAAGGTTTCACTAATCCAAAGTTCGGC CAAATATTGTCGGATATTAAATGGAAATATCGCGGTCAAATTAACCCACTGAACAAACAAATGTCACTTGATGTACATAT CAGTGCAGTAAAAGATGAAGACGGTAAACGCATCATAATAGGCGACGCAAATCTCAGTAAAGATGGTCTGCGCATTTATG AAGTCAAAGATATCGCCATCTGTATTGAAGAAGCTTAG
Upstream 100 bases:
>100_bases GCCTTGACGATGCAATTAACTCATTATCTCAGCAGACGGCAATAGCCGGCGGCTCACCACTGTCTCGTTGCAGTGAAACA TCATTAGAAGGAGAACCTCA
Downstream 100 bases:
>100_bases GCCAAAAAGGAATAATAATGACAACTCAAGTGCACAACGAAAAGCTTTCTCCTTGGCCATGGCAAGTTAGCCAGCAACAC GTCAGTTTTGACTCTACTGG
Product: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1985_residues MSSQATPKIAIVGLANQYPDADTPAKFWQNLLDKKDSRSQISASKLNASPSDYLGVQGESDRFYCDKGGYIQDFQFNPQG YRIEPDAFTGLDDSFLWATDTARNALTDAGIDLSNNVLQRTGIVMGTLSFPTAKSNELFVPLYHSAVEKALQIKLQQPNF NLQSFNQASQNNTAENANNNNNVAPKTVNLRNGAIAHNASKIVADALGLGGTQLSLDAACASSVYALKLACDYLHTGKSD MMLAGAVSGADPFFINMGFSIFHAYPDHGISAPFDSNSKGLFAGEGAGVLVLKRLEDAERDGDHIYALVSGIGLSNDGKG QFVLSPNSKGQVQAFERAYRDAAAIDPGITPASIEVIECHATGTPLGDKVELTSMERFFEDKLQGSATPLIGSAKSNLGH LLTAAGMPGIMKMIFAMREGVLPPSINISAPIASPNGLFGQATLPNDVLPWPDKVGNKARHAGVSVFGFGGCNAHLLLES YQAKAVTDKTLNNHSQNNNSLSNNALNNNIQTRSTALVDAETPMHITGMAAHFGQCSSIDALASKIIAKQAIFSPLPTQR WKGLDKHPELLAQYGITDVPQGAYIDQFDFDFLRFKVPPNEDDRLISQQLLLIKVADEAIADAKLTPGSKVAVLVAMETE LELHQFRGRVNLHSQIAQSLNAQGIQLSTAEYDSLETIAMDSVLDAAKLNQYTSFIGNIMASRIASLWDFNGPAFTISAG EQSVNRCIDVAQNLFALGSLQEPLDAIIIAAVDLSGSIENMLFNTAKLNAKGLRSTDWLVGEGAGALVLQQTSAVHSQLD SYASIDSVNFTPLSQLPTQLPTQLPTELSADIVELNQSPECILTTQGRQFTQRLTDAATAVSSAPLLSKAHDILGHTFAA SGMASLLHGLVQTRHIDKPSINASVFTSSDNQYSQVNLSVSAAQQHALHARLGNNLTQQLATGSKLSLIKQVSLGGRDIY QHIIDSPLDTLDSIINQCADIAPTVVSSTESKQPTIGDNSPLSVNNSENIAEPLMSENMPNKTIPKQPRVASMTNHTIPP AHLTAFQQNQWLAQQAHLAYLASRDAGLKVADSLLRSQLAGLSHQPTATQVASPAANTYAVNAAVQTVVKSEAISPARLI QPNHACVPAYTAPIPADKPCIWNYADLVEYAEGDIAKVFGPDYAIIDSYSRRVRLPTTDYLLVSRVTKLDATMNQYKPCS MTTEYDIPVDAPYLVDGQIPWAVAVESGQCDLMLISYLGIDFENKGERVYRLLDCTLTFLADLPRGGDTLRYDIKINNFA SNGDTLLFFFSYECFVGDKMILKMDGGCAGFFTDQELADGKGVIQTEDEIKHRQQVINNPNKPTFTPLLHCSQTAFDYGQ IHHLLTGDIGSCFGGDHVAHQLQTGIQKSLCFASEKFLMIERVSQLQTQGGAWGLGLLEGHKHIAPDHWYFPCHFQGDQV MAGSLMAEGCGQLLQFFMIHIGMHTLVENGRFQPLENASQKVRCRGQVLPQTAELTYRMEVTEIGIHPRPYAKANIDILL NGKVVVDFQNLGVMIKEDAECTRYPLISLDASPAVDSNASSKVIANKAPLMAQIPDLNAPTNKGVIPLKHVEAPIVSADS KYANRVPDTVPFTPYHMFEFATGDIEKCFGPDFSIYRGLIPPRTPCGDLQLTTRVVEINGKRGELKKPSSCIAEYEVPAD AWYFAKNSHQAVMPYSVLMEISLQPNGFISGYMGTTLGFPGQELFFRNLDGGGQLLRHVDLRGKTIVNDSKLLSTVIAGS NIIQSFTFELSVDNEPFYTGSAVFGYFKGDALKNQLGIDNGKITQPWHVDNNVMADISVNLLDKQSRVFTPPTSQPHYCL AGGQLNFIDKAEIVEAGGKYGKGYLAASRTIDPSDWFFQFHFHQDPVMPGSLGVEAVIELMQTYAISTDLGKGFTNPKFG QILSDIKWKYRGQINPLNKQMSLDVHISAVKDEDGKRIIIGDANLSKDGLRIYEVKDIAICIEEA
Sequences:
NA
Specific function: NA
COG id: COG0764
COG function: function code I; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA