Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

Click here to switch to the map view.

The map label for this gene is hisS

Identifier: 114562295

GI number:

Start: 1318010

End: 1319284

Strand: Direct

Name: hisS

Synonym: Sfri_1117

Alternate gene names: NA

Gene position: NA

Preceding gene: 114562294

Following gene: 114562296

Centisome position: NA

GC content: NA

Gene sequence:

>1275_bases
GTGGCAAAGCAAATCCAAGCAATTCGCGGAATGAACGATATTCTGCCTACGCAAAGTCCTTTATGGCAAAAAGTCGAAGC
AGTATTGCGTTCATCAGTTAGTGCATTTGGTTATAGCGAAATTCGCACTCCCATCGTTGAAAGTACAGATCTTTTCAAGC
GCTCTATTGGTGAAGTGACCGATATTGTTGAAAAGGAAATGTACACTTTTGAAGACCGTAACAGTGACAGTTTAACCTTA
CGCCCAGAAGGTACGGCTTCAACCGTTCGTGCTGGTAATGAACATGGTCTGCTGTATAACCAAGAACAACGTTTATGGTA
TATGGGTCCCATGTTTCGTCATGAGCGTCCGCAAAAAGGTCGTTACCGTCAATTCCACCAGTTTGGTGTTGAAGTGTATG
GTATTGGTAGCGCCGACATTGATGCTGAAGTATTAATGTTATCTGCCCGTTTATGGGATTTACTCGGCATTAAAGAACAC
GTTGCACTAGAGCTTAATACGCTAGGCGACCCCGCTGAGCGCGCCGCTTACCGTGATGCTTTAATCGCATTTCTAGAGCA
GCACAAAGATAAGTTGGATGAAGATAGTCAACGTCGCATGTATTCAAATCCATTGCGAGTGTTAGACAGTAAAGATCCGC
AAGTGCAAGCCATTTTAGGCGATGCACCAGCATTGATGGATTACCTTGGTGAAGACTCTAAGACACATTTTTCAACTTTG
TGTGAACTCTTAGACGCTGTTGGCATCCAATACACCATCAATCCGCGTTTAGTCCGTGGTTTAGATTATTATAACCGCAC
TGTATTTGAATGGGTTACCACTAGTTTGGGCTCTCAAGGTACAGTATTAGCAGGTGGACGCTACGATGGTTTAGTCGGCC
AACTTGGTGGTAAAGACACACCTGCGGTTGGCTTTGCTATGGGACTTGAGCGTATTGTGCTTTTGCTTGAAACGCTTGAG
TTAACCAGTGATATTGCCCCTGAAGTGGACGTTTATGTCACTGCAATGGGTGAAAATTGTGTCGTTGAAGCCATTAAAGT
GGCTCAAGAGTTGCGTCAACAGTTGCCAACGCTTAAAGTCATGAGCCATTGCGGTGGTGGTAACTTTAAAAAGCAAATGA
AACGCGCTGATAAAAGCGGTGCCCAATTTGCGTTGATTATTGGTGAAAACGAAATAGCCAACAATCAAGTTGCCATTAAG
CCGTTAAGAACAAACAATGAACAACAATTGGTTACGCGTAGTGAACTCGTAGCTAAAATTGCAGAACTGATTTAA

Upstream 100 bases:

>100_bases
AATCATTAATCCTGTGCATGGCAATCTAAGTGTTGTCGATGTTGAGGGTATATTTACATTTTATTAGCGCAAGCTAATTC
AAGAATTGGACACGTTAACA

Downstream 100 bases:

>100_bases
GAACAGATTTTAAAGGGGAAGTGCAAGTGGAAATTTATAGCACAGAAGAACAACAAGTAGATGCTATCAAGCAGTTCTGG
AAAGATTATGGTACCTCGAT

Product: histidyl-tRNA synthetase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>424_residues
MAKQIQAIRGMNDILPTQSPLWQKVEAVLRSSVSAFGYSEIRTPIVESTDLFKRSIGEVTDIVEKEMYTFEDRNSDSLTL
RPEGTASTVRAGNEHGLLYNQEQRLWYMGPMFRHERPQKGRYRQFHQFGVEVYGIGSADIDAEVLMLSARLWDLLGIKEH
VALELNTLGDPAERAAYRDALIAFLEQHKDKLDEDSQRRMYSNPLRVLDSKDPQVQAILGDAPALMDYLGEDSKTHFSTL
CELLDAVGIQYTINPRLVRGLDYYNRTVFEWVTTSLGSQGTVLAGGRYDGLVGQLGGKDTPAVGFAMGLERIVLLLETLE
LTSDIAPEVDVYVTAMGENCVVEAIKVAQELRQQLPTLKVMSHCGGGNFKKQMKRADKSGAQFALIIGENEIANNQVAIK
PLRTNNEQQLVTRSELVAKIAELI

Sequences:
NA

Specific function: NA

COG id: COG0124

COG function: function code J; Histidyl-tRNA synthetase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA