Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 114562258

GI number:

Start: 1277280

End: 1280564

Strand: Direct

Name: Not Available

Synonym: Sfri_1080

Alternate gene names: NA

Gene position: NA

Preceding gene: 114562257

Following gene: 114562260

Centisome position: NA

GC content: NA

Gene sequence:

>3285_bases
ATGAAACTTCGTCGCTCCGTTGCGCATTGTATGTTGGCACTAGGCACTTTAGCGTGTTCATCAATGATATTCGCCAACGC
CTCAAATCAAGGTTATTACCGTGCTCCAGCCTTAAACGATCAAACCTTAGTGTTTACTGCCGAAGGCGATCTTTGGACTA
AGCAACTCAATCAAACCAAAGCCAGCCGCTTAACCAGTTTGGCCGCAGAAGAGTTAGACGCAACTATTTCTAAAGACGGT
AAATGGGTGGCATATACTGCCAATTATGAAGGCGCAACCGAAGTGTATGTGATGCCAATTGCAGGCGGCGTAGCTAAACG
TGTGAGCTTTGAAAACAGCCGAGTACGTCTGCAAGGCTGGACAGCGTCTGGCGAAGTATTGTATTCAACCGACAACGCCT
TTGGCCCGGCTAACTTCTGGGTGCTTAAAACCGTTGACCCACAATCCTTAACCATTACCGATTTACCGTTAGCTGACGCA
GTCGAAGGCACCATTGATGATAAAGGTGAATATGTTTATTTTACCCAATTTGGTCTGCAAGTTAGCGGCGACAATGTCAA
AGTGTATCGCGGCGGCGCCAAAGGCGAAATTTGGCGTTATAAGTTAGGCAGTAAACAAGAAGCGCAGCAGTTAACCAGCG
CCCATGAAGGCTCGGTTAAACAGCCAATGCTATGGAACCAGCGTGTTTACTTTGTCAGTGACCAATCAGGCAATGACAAC
ATCTGGTCAATGACACTAGATGGCAAAGACATTAAACAACTTACTCAATACAGCGACTGGCAAGTGCGTGACGCCCAGCT
TAATAATGGCCGTATTATATTTCAGCAGGGCGCCGACATTAAGTTGCTTAACTTAGCCGATCTTGCAGAATCTACAGTAG
CCATCGAGCTTACCAGCGACTTTACTCATCGCCGTGAGCAGTGGGTTAACGACCCAATGGATTACGCCACCTCGACAGTA
TTTTCTCATCAAGGCGATAACGTAGTAATAACGGCCCGTAGCCATGTAGCTATTGCCAGCAACGATGGTCGTCGTTTAGT
GCAAATAGATTCACCCGCCGATAGTCGTGTACGCGATGCGTTGTTAAGTGATGACGGCAAATGGGTTTATGGCATTAGCG
ATGCGTCTGGCGAACAAGAAATTTGGCAATATCCTGCCGACGGTTCTGCTGGTGCTAAGCAGCTCACTAAAGATGGCAGC
ACCTTACGCACCAGCTTGTCGTTATCTCCCAATGGCCGTTATTTAGTGCATGACGATTACATGGGCAATGTATGGTTACT
TGATTTAAGCCGCTACAATAACCAAAAAATCATACAAAATGGTGAGGGTTTAGGCCCTTACCAAGACATAAAATGGTCTG
GCGACAGTCAATTTATTGCGCTAACCAAGGCTGAAATTGGCAAACAACGTCCGCAAATTGTGTTGTATTCCATTAACGAA
TCAAAATCACAAACCTTGACCACAGACAAATATGAGTCGTTTTCTCCTAGCTTTAGTCACGATGGTAAATGGTTGTATTT
CTTGTCTAACCGCGAATTTAAAGCTAATCCTGGCTCGCCTTGGGGCGACCGTAACATGGGACCGATTTTTGACAAGCGCA
CTCAAGTGTTTGCCTTAGCGTTAGACGCTAAAGCGTCGTTTCCGTTTGCCAAACCAACCGAGCTTACCGTTAACAAAGAC
GCTAAAAAAGCTGACAGTAAAGACCAAGACATCCCAGCAAAAGTCAAAGTAGAGTGGGACGGATTAAACCAACGCTTATG
GCAAGTGCCAGTTGATGCAGGTAACTACAATAGCTTAACCGCAGCTAAAGATAAGCTGTATTTATTGGATGGTAGCCAAG
ACAAAAGCGAGCTAAAACTGATTAAGTTTGACCCGCTCAATATTAAAGTCGACGCCTTTAGCGAAGATGTCGGCCAATAT
TCGCTATCAAAAGATGGCAGTAAAATCATGCTGCGCAAACAATCTGATCCTAAAAGCCTCATGATTGTCGATGCCGGCGA
CAAACTTCCCAGCGATGTATCGCGCGCCAAAGTCAGCACCGACCAATGGCAATTAAGTATTTCGCCGCAGCAAGAATGGC
AACAAATTTTTGAAGACGCGTGGTTAATGCATCGCGACTCGTTTTTTGATCCAAAAATGCGCGGCGTAGATTGGCAAGCA
GCTAAAGCTAAATATCAACCTTTGGTCGACAGACTGACCGATCGTAATGAGCTGAATGACATTTTTACCCAAATGATGGG
TGAACTGAACTCGTTACATTCACAAGTGCGTGGTGGAGATATTGCCCAAGATGCCGATGCAGCCAAAGCCGCTGCATTAG
GGGCTAGGCTGACACAAACCGATAGAGGTGTGGTAATAAGCCATATTTATCAAACCGATCCTGAGTTACCGTTGTCGGCA
TCCCCATTGGCACGCATTGAGGTTGATGCGAAAGAAGGCGATGTGATTGCGAGCATCAATGGCAAGAAAATCACTAACAT
TGCCGATGTAACTCAACTGCTGCGAAATCAAGGCAACAAGCAAGTGTTGCTCGGTTTAGTCCGTGGTAAAACAGCCATCA
ATACCATAGTGACTCCCCATGATATTGGTACCGATGCCAAGCTGCGTTACCTTGATTGGGTTGAGCATAACGGCGACAAA
GTGGCCAAAGCCTCTAAAGGGAATATTGGTTATTTACACTTATATGCCATGGGCAGCGGTGATGTCGAAAGCTTTGCTCG
CGAGTTTTATACTAATTACGACAAAGAAGGTTTAATCATCGATGTTCGCCGCAATCGTGGTGGCAATATCGACAGCTGGA
TTATCGAAAAACTGTTACGCCGTGCGTGGGCATTTTGGCAGCCAACTCATGGCAGCACAAACGCAAACATGCAACAAACC
TTCAGAGGCCATTTAGTTGTGTTGGCTGATCAAATGACCTACTCAGATGGTGAGACTTTTTCTGCTGGCATTAGAGCGCT
GAATATTGCGCCTATAATCGGTAAGCAAACCGCGGGCGCTGGTGTGTGGTTGTCGGGTCGAAATTCAGTGACCGACAAAG
GCATGGCACGAGTGGCAGAATACCCACAATATGCCATTGATGGCCGTTGGGTTGTTGAAGGTCACGGGGTTGAGCCAGAC
ATTGAAGTTGATAACTTACCTTATGCCACTTTTAGCGGTAAAGATGCACAGCTTGATGCTGCTATCAGTTATTTGAAAGA
TGAACTAGTACAACAACCTATTGCTCCATTACAAGGCTTGCCAATGCCTGACATTGGCCCTGCAGCCGACATAAAAGCGA
AGTAA

Upstream 100 bases:

>100_bases
ACAATTGGCATAACTCTGATAACGTGAATCAATCAATAAAAATAGCCTACTCGATAACGCGTTATCTCTAATTATCGACT
TTATAAGGAAGCTCCTCACC

Downstream 100 bases:

>100_bases
CCTCATATTGAGTTAAGTAAACCAATAAAAAATAACCCTCTTAGCGTCATGTTGAGAGGGTTATTATTAAAAATGTAAAA
ATGTAAAAATGTAAAACTGT

Product: peptidase S41

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1094_residues
MKLRRSVAHCMLALGTLACSSMIFANASNQGYYRAPALNDQTLVFTAEGDLWTKQLNQTKASRLTSLAAEELDATISKDG
KWVAYTANYEGATEVYVMPIAGGVAKRVSFENSRVRLQGWTASGEVLYSTDNAFGPANFWVLKTVDPQSLTITDLPLADA
VEGTIDDKGEYVYFTQFGLQVSGDNVKVYRGGAKGEIWRYKLGSKQEAQQLTSAHEGSVKQPMLWNQRVYFVSDQSGNDN
IWSMTLDGKDIKQLTQYSDWQVRDAQLNNGRIIFQQGADIKLLNLADLAESTVAIELTSDFTHRREQWVNDPMDYATSTV
FSHQGDNVVITARSHVAIASNDGRRLVQIDSPADSRVRDALLSDDGKWVYGISDASGEQEIWQYPADGSAGAKQLTKDGS
TLRTSLSLSPNGRYLVHDDYMGNVWLLDLSRYNNQKIIQNGEGLGPYQDIKWSGDSQFIALTKAEIGKQRPQIVLYSINE
SKSQTLTTDKYESFSPSFSHDGKWLYFLSNREFKANPGSPWGDRNMGPIFDKRTQVFALALDAKASFPFAKPTELTVNKD
AKKADSKDQDIPAKVKVEWDGLNQRLWQVPVDAGNYNSLTAAKDKLYLLDGSQDKSELKLIKFDPLNIKVDAFSEDVGQY
SLSKDGSKIMLRKQSDPKSLMIVDAGDKLPSDVSRAKVSTDQWQLSISPQQEWQQIFEDAWLMHRDSFFDPKMRGVDWQA
AKAKYQPLVDRLTDRNELNDIFTQMMGELNSLHSQVRGGDIAQDADAAKAAALGARLTQTDRGVVISHIYQTDPELPLSA
SPLARIEVDAKEGDVIASINGKKITNIADVTQLLRNQGNKQVLLGLVRGKTAINTIVTPHDIGTDAKLRYLDWVEHNGDK
VAKASKGNIGYLHLYAMGSGDVESFAREFYTNYDKEGLIIDVRRNRGGNIDSWIIEKLLRRAWAFWQPTHGSTNANMQQT
FRGHLVVLADQMTYSDGETFSAGIRALNIAPIIGKQTAGAGVWLSGRNSVTDKGMARVAEYPQYAIDGRWVVEGHGVEPD
IEVDNLPYATFSGKDAQLDAAISYLKDELVQQPIAPLQGLPMPDIGPAADIKAK

Sequences:
NA

Specific function: NA

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA