| Definition | Shewanella frigidimarina NCIMB 400, complete genome. |
|---|---|
| Accession | NC_008345 |
| Length | 4,845,257 |
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Identifier: 114562255
GI number:
Start: 1273755
End: 1275593
Strand: Direct
Name: Not Available
Synonym: Sfri_1077
Alternate gene names: NA
Gene position: NA
Preceding gene: 114562252
Following gene: 114562256
Centisome position: NA
GC content: NA
Gene sequence:
>1839_bases ATGAACAATACCCATAAACAACTTACTAGCAGCGCCTTAGCCATCGTGATTAGTGCTATTATTATCAGTGGTTGTGCGCA AGAATCCAAAGACAGTGCGAAACAAAGTCAGCCCCAATCTACTTCTAAAATTCAATCCGCGAGTAAAACGGATTCCTCTG CACAAGCGCGTCCCGAGTTATCTGAGGTAGCAGGCTTAGTGATGGCGTCTGAGCCACAGGCTGATTTATACCAAGGCTCA AAGGAGCTACATCGCAGTGCTAAAGTCATGACATCGTCAATGGCGCAGCGTATTGTGAGTTCTCAGCATGTTAGCGTAAG TGATCGCAATTTCTCTTTGGCACCAACGACTAATGATAAGTTTGAGTCGGTAGTGCAAAACGGCAATATGGTTGCTGGCG AAACACCGGTATCGACATTTTCAATTGATGTTGATACTGGCAGTTACAGCACTACGCGCAGATTAATCAATCAAGGCCAA CTGCCGACTAAGAATACCGTTAGGGTAGAAGAGTTAGTCAATTACTTCAGCTATGACTACCCAGTACCGACAAACTCTGA GCAGCCATTTAGTGTCAATACTGAATTAGCACCATCACCTTACAATGCAGATACCCAGTTATTACGTATTGGCCTTAAAG GGTTTGATGTTGCGCCTGATAAGCTTAGCGCAAGTAATTTGGTGTTATTGCTTGATGTGTCAGGCTCTATGTCGTCTGCT GATAAATTGCCATTATTGAAACAAGCCATGCTAATGCTGAGTCAGCAACTATCGGCGCAAGATAAAGTATCGATTGTGGT GTACGCCGGTGCCAGTGGTGTAGTCCTTGATGGTGTCGCAGGTAATGACTTTACCGCCATTAAAACAGCCCTAAGTCAGT TAAATGCGCAAGGTGGCACTAACGGTAGCCAAGGTATTCAGTTGGCGTATCAATTAGCGCAAAAGCACTTTATCGAAAAC GGCAGTAACCGAGTCATATTAGCCACCGACGGTGACTTTAACTTGGGGATGACAGATCATCAGCAATTGGTCGATTTCGT TGCCAGTCGAAGCAAAAAGGGGATTGGCTTATCAACACTTGGTTTTGGACTAGGTTCAGGTTCTGCCAGTTACAACGACC ATTTGTTGGAGCAATTATCCAATAAAGCTAACGGACAATATGCCTTTATCGACACCTTAAATGAAGCACGGAAAGTGCTG GTTGATCAACTTAGTGCCACACTGTTAACCATTGCTCACGATGTTAAAGTGCAAATTGAGTTTAACCCTGCGGTGGTGTC TGAGTATCGACTGATTGGTTACGAAAACCGCTTGTTAAATCGTAGTGACTTTAATAACGATGCCGTTGATGCGGGCGAAA TTGGTGCGGGTCATACTGTTACTGCATTATATGAAATTCGTTATAACGACAGCCATAATCGCCTAGTTGATCCGCTGCGT TATACCGCCACAGAATCGACGCAAATAGATGATGCTAAAGTTCATCCACATACCGCAAATGAAGTGGCTTATTTAAAGCT GCGTTATAAAGCGATTGGCGAACAAGACAGTCAATTAATCACTTACCCCATTAACCGTGAGCAGCAGTTAACGCATTTAC ACCAAGCCAGTGACGATTTTAGATTTGCTGCGGCAGTTGCAGGTTTTGGTCAGCTGCTTAACCAGAATAATTATGTCCAC GATACTGATTATGCTAAGTTAATTACACTTGCTGAGTCTGCAATGGGCCAAGACCGTTTTGGCTATCGCCATGAGTTTGT GCAAATGTTAAAAACTGCAAGTGTACTCGATAAGCAGGTTTTGATGACTGAACCTGAAACTCGTTGGGTTAGCCAATAA
Upstream 100 bases:
>100_bases TAACCCTTTTACTTATCGCGCTCGTTATTAGCTGTATGCAAGGTCACTTTGTTGATGCGGCCAATATGAATAAATCAGTC GATAGATTAGAGGAATAACC
Downstream 100 bases:
>100_bases ATGCGTCACAAAAAGGATAAAATGGTGCCAACATCAATACACCCTAAGGATGAGTCGTTAATTCCTCAAGTGGGAAGTGA CGAGCAACTGATGCTCGACT
Product: von Willebrand factor, type A
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>612_residues MNNTHKQLTSSALAIVISAIIISGCAQESKDSAKQSQPQSTSKIQSASKTDSSAQARPELSEVAGLVMASEPQADLYQGS KELHRSAKVMTSSMAQRIVSSQHVSVSDRNFSLAPTTNDKFESVVQNGNMVAGETPVSTFSIDVDTGSYSTTRRLINQGQ LPTKNTVRVEELVNYFSYDYPVPTNSEQPFSVNTELAPSPYNADTQLLRIGLKGFDVAPDKLSASNLVLLLDVSGSMSSA DKLPLLKQAMLMLSQQLSAQDKVSIVVYAGASGVVLDGVAGNDFTAIKTALSQLNAQGGTNGSQGIQLAYQLAQKHFIEN GSNRVILATDGDFNLGMTDHQQLVDFVASRSKKGIGLSTLGFGLGSGSASYNDHLLEQLSNKANGQYAFIDTLNEARKVL VDQLSATLLTIAHDVKVQIEFNPAVVSEYRLIGYENRLLNRSDFNNDAVDAGEIGAGHTVTALYEIRYNDSHNRLVDPLR YTATESTQIDDAKVHPHTANEVAYLKLRYKAIGEQDSQLITYPINREQQLTHLHQASDDFRFAAAVAGFGQLLNQNNYVH DTDYAKLITLAESAMGQDRFGYRHEFVQMLKTASVLDKQVLMTEPETRWVSQ
Sequences:
NA
Specific function: NA
COG id: COG2304
COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA