Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 114562249

GI number:

Start: 1265573

End: 1268404

Strand: Direct

Name: Not Available

Synonym: Sfri_1071

Alternate gene names: NA

Gene position: NA

Preceding gene: 114562248

Following gene: 114562250

Centisome position: NA

GC content: NA

Gene sequence:

>2832_bases
ATGTTAGCAGCGGCCATCAGTGCTGTATTAAGTGGTTGCGCATATGACGCATATCAGTCGTCGAGTTTGCCCCAAGGTGT
TACCTTAATTGAAACCGCGGCCCCGACAGCAAATCAAGTTAGCATTCCTTATAAAAAATATCAGTTAGCCAACGGCTTAA
CCGTGATTTTGCATCAAGATAAGTCAGATCCATTAGCTCATGTCGATGTGACCTATCATGTCGGTTCAGCCCGTGAATTA
GCCGGTCGCAGTGGCTTTGCACATTTATTTGAACATATGATGTTCCAAGGCTCACAACACGTTGGTGATGAACAGCATTT
TAAAGTGGTTACTGAAGCGGGCGGAACATTAAACGGCACCACCAATACCGACAGAACCAATTATTTTGAAACTGTGCCAA
GTAATCAACTAGAGAAAATGCTGTGGTTAGAGTCTGACCGTATGGGCTTTTTACTGCCCGCCCTCACGAGTGAAAAATTC
GAAGTACAACGTGAAACCGTTAAAAATGAACGTGCACAACGGATTGATAACCGTCCTTATGGCCGTTTAAATGAACGTTT
TAACCAAGCGTTTTATCCAGCGGGTCACCCGTATTCTTGGCCTGTTATTGGCTGGCCAGATGATTTAGATCGCGCCACAG
TTGCTGATGTGAAACATTTTTTTCAACGTTGGTATGGGCCTAATAATGCGACCTTAACCATTGGTGGCGACTTTGATGAG
ATCCAAACGTTAGCATGGGTAAATAAATACTTTGGTGAAATTCCAGCAGGGCCTACGGTTAAGCCTGAAGCTAAAACCAT
GGTGACATTGGATAAAACCCGTTATATATCGATGGAAGACAAAGTACATTTGCCATTAATATACATGGGATTCCCCACTG
TTTACGCGCAACACAAAGACGAAGCCGCACTCGATCTACTCGCTAATATTCTCGGTGGCGGTAAAACATCACTTATCTAT
AAAAATTTGGTCAAAGATGGTTATGCAGTCCAAGCTGCAGTCAGCCATCCATGCCAAGAGCTTACTTGTCAGTTATCACT
TTACGCTGTCGCTAACCCGAGTAAAGGCGGCAGTCTTGCTGATCTTGAAAGCAAAATTAATGAAACTATCAGTGAGTTTG
AACAACGTGGCGTAACCGACGATGACTTGCAAAAAGTCAAAGTGCAGTTCGAAGCCAGCACTATTTTTGGTATGCAAAGT
GTCGCTGGAAAAGTCTCGACACTTGCCGCTAACCAAACCTTTTTTGGTAAACCTGACATGGTGGCTGCTGATTTAGCTCG
TTATGCTAACGTCACCAAAGCCGATGTAATGCGGGTATTTAATACCTACATTAAAAATAAGCCAATGGTGGTAATGAGTA
TTGTGCCAGAAGGGCAAACACAATTAATCGCCCACGCGGATAATTTTGAACCGACTACTTTGCCTATTGCGCAAGAAGCG
GTAACGGGATTAACCGATATCACTTTCGCCAAATCTTCATTTGATCGCAATAAAACCCCAGCATCAGCCGCGGCGCCGAT
ACTAACAGTGCCGCAATTATGGGACAGTAAGCTGGCAAATGGCATTAAAGTGATGGGCACTGAAAGTGACGAAACGCCAA
CTGTCGAACTGCTTATTTATTTGGATGGCGGCCATCGTTTAACCCCAATTAACAAGGCGGGTCTTGCTGAGTTAACTGCA
TCAATGCTTAATGAGTCGAGCGAGCAACGCAGCAGCGAGGATTTGGCTGGGGCGCTTGATATGTTAGGTTCATCGATTAG
TTTTGGCGCCAGCGATTCACAAAGTTACCTTAAAGTGTCGAGTTTAACGGCAAACCTAGATGCCACGCTTGCCATCGTTA
AAGAGCGTTTGTTTAGTCCCGGTTTTGTTGCTGCAGATTTTGAACGAGTTAAACAACAGCAGTTGCAAGGTTTGCAACAT
CAAATGTCCGATGCTAATTATCTAGCCCGAAGTGGTTTTTCTGCCTTGTTATATGGCAACAATAGCCCATTAGGGATCAG
CAGTGATGGTACGATTAAATCAATATCAGCATTAACGCTAGATGACGTGAAGCAATTTTACCAACAGCAATACCGTGCAG
GTAATGCTCAGATGGTCGTGGTGTCTGACTTAAATCAACAACAAATAATGCCTAAGTTGTCGATGTTTAATGAATGGCAA
GGTGAGGCGACTCAGGTTGCAGCGCTGCCTGCATTACCAACACACCTTAAAAACACCATTTATTTGATTGATAAACCCGG
TGCAGCACAGTCGGTGATTAATATCGGCCAAGTGTCGTTACCCTATGATGCAACAGGTGATTATTTTAAAGCTTATCTGA
TGAACTACCCATTAGGGGATGCGTTTAATAGTCGTATTAATCTTAATCTACGTGAAGATAAAGGTTACACCTATGGTGCG
CGCACTCAGTTTGGTGGCGCTGAAGATACCGGTCAGTTTATGGCGTATGCTAGCGTAAGAAGCGATGTAACAGGGTTAGC
AGTAGCTGAGTTTGTTAACGAAATTAACGCTTACCAAGCATCTGGTATGACTGACGAAGAAAGTGCCTTTATGCGCAGTT
CCATTGCGCAGAGCCAAGCATTAGAATACGAAACCCCGTATCAAAAAGCCGGTTTTTTAAGAATGATCCAACGTTATCAG
CTCGATAAAAGTTTTACGGCTAAACAAGACAAAATTGTGAAAAATATTTCAACCGAAGAGTTAAACAAACTTGCCAGTAA
ATTATTAAATATCAATGATATGGTGATGCTGGTGGTGGGTGATAAAACCACAGTTGTACCGCAGTTAACAGCGCTGGGGT
ATCAGATTGAAATGATGACACTTGCCGACTAG

Upstream 100 bases:

>100_bases
GACGTATACGTTTGAGTATTGATACCGCGTTACTTTTGCAACGATGGTTATTTTTGTTTTAAGGAAGGAGTCGATTTTGA
AACTAAATTTGAATAAATGG

Downstream 100 bases:

>100_bases
TTGAACACTTGCTACTACTAGGGTTAACACTAGCCTTGAAATAAGCTAATGTTAGCCTCATATACATGAGATATGTCCTT
AGCTCAATCTGTTGTAAATA

Product: peptidase M16 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>943_residues
MLAAAISAVLSGCAYDAYQSSSLPQGVTLIETAAPTANQVSIPYKKYQLANGLTVILHQDKSDPLAHVDVTYHVGSAREL
AGRSGFAHLFEHMMFQGSQHVGDEQHFKVVTEAGGTLNGTTNTDRTNYFETVPSNQLEKMLWLESDRMGFLLPALTSEKF
EVQRETVKNERAQRIDNRPYGRLNERFNQAFYPAGHPYSWPVIGWPDDLDRATVADVKHFFQRWYGPNNATLTIGGDFDE
IQTLAWVNKYFGEIPAGPTVKPEAKTMVTLDKTRYISMEDKVHLPLIYMGFPTVYAQHKDEAALDLLANILGGGKTSLIY
KNLVKDGYAVQAAVSHPCQELTCQLSLYAVANPSKGGSLADLESKINETISEFEQRGVTDDDLQKVKVQFEASTIFGMQS
VAGKVSTLAANQTFFGKPDMVAADLARYANVTKADVMRVFNTYIKNKPMVVMSIVPEGQTQLIAHADNFEPTTLPIAQEA
VTGLTDITFAKSSFDRNKTPASAAAPILTVPQLWDSKLANGIKVMGTESDETPTVELLIYLDGGHRLTPINKAGLAELTA
SMLNESSEQRSSEDLAGALDMLGSSISFGASDSQSYLKVSSLTANLDATLAIVKERLFSPGFVAADFERVKQQQLQGLQH
QMSDANYLARSGFSALLYGNNSPLGISSDGTIKSISALTLDDVKQFYQQQYRAGNAQMVVVSDLNQQQIMPKLSMFNEWQ
GEATQVAALPALPTHLKNTIYLIDKPGAAQSVINIGQVSLPYDATGDYFKAYLMNYPLGDAFNSRINLNLREDKGYTYGA
RTQFGGAEDTGQFMAYASVRSDVTGLAVAEFVNEINAYQASGMTDEESAFMRSSIAQSQALEYETPYQKAGFLRMIQRYQ
LDKSFTAKQDKIVKNISTEELNKLASKLLNINDMVMLVVGDKTTVVPQLTALGYQIEMMTLAD

Sequences:
NA

Specific function: NA

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA