Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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Identifier: 114562126

GI number:

Start: 1107557

End: 1109632

Strand: Direct

Name: Not Available

Synonym: Sfri_0948

Alternate gene names: NA

Gene position: NA

Preceding gene: 114562125

Following gene: 114562127

Centisome position: NA

GC content: NA

Gene sequence:

>2076_bases
ATGTCTAACCACCCATTTAGCCTGTCAGTGATAGCAGCCGCAGTGCTTTATGTTTGCCATTCTACCAATGCCGTTGCAGA
AACGGTGACCGAGTCTATTGATAACCTTAATAATCAACTCGATTTGCAACAGTCATCGATAAGCCAATTTCATTATCGCC
AAAGTGATATAGCATTAGGATTGACCGGCGCGACAGTGTTACCTACCGGACCAAATCAAGATATTACTATCACACATGCT
GGCGCCACTGACGGTGTAGCCATTTTACAGGATGGTATTTTCTTTTCTCCTGCGCCTTATTCTGGACAACATTTAGTGTT
GCAACCCAATTTAATGCACCAGCAAAAAGTGTCTTTTTCGAGCATGACCAGTGTGACTGAAAGTTCACAAGCGGCTTTTG
GTAAGCTTGACTATCAGTCGGTACAAATTAGTCCGCAAAAATATGCAACCGATGTCAATGTTGAAGGCAGTGACAATAAT
GCCATCAATGGTGGGGCTGTGCTGAGTGGTACTTCGAAGCAAAATGGCATGTTACTGGCAGTAGATTATCAATCTGCATC
TGACGATGTGGGTTATCGCGTCGCCCGAGATGCAGATAGTACACAGAAAGATATTTTGTTCAAAATTGCTGCCGATAGTT
TACCCGGAGCACGTAACCAACAAACGACAGAATTTAGTTATCAGTACTCATCACAAGAAGCTGATCGCGGAGCGTTGGGG
TTAACCAGTGTTGATTTTTCAGTAAATCCGACTCAATTATATTCAGCAGCTAGCACCGACAATACTGAAGGCGAACGTCA
ACGTTACGTGTTAGCACATCAGCTAATCATGTCATCTACTTCAACGATGGCTACCGACTTTTATTATCAAACCTATTCAC
AACAATCTCAAGAGATGCAGTTTGTTGATGGTGAGCAAGTTAATAATGCGTTGCTGTCTCGTATTGCTATGTTTGAAACA
ACACCCACCACCGATGGGATGAACTTAGGAGCGTTAACACAAAATAACGATTTCTCTGGGTTTGGTATGCAAACAAAAGG
TGTCAGCATGTATGGTCAGCATCAGGTGACTTATAGTGCGCGCTACCATACAGATAAAGCTGAAATGCGTTTAGGTCAAC
GTGAGTGGTCGTGGAACAATGATTTATCATTGACGCCGACAACTGATGATGAATATGCACTGACGTATACTGACGATGCC
TCGGCATTTTCATCAGCGGTAGATACTAAATTAAATTATGGTCAGTGGTCTATCAACCTCGGTTTAGGTTATGAGCATGT
CAGTGTTTCTCGTGAGCTTGGTGATGTAAATACGAGCCTTAATGCTGCAGACTTTTCTGATGATGGCTGGTCGCCTTCTA
TTGAAGTGGCTTACCAGAGTGGGCCGTGGTTAGCCGCGTTACAAGCTAAACAAGCTTGGACAGCCGCTTCAGCCGGTAAT
ATTGAACAAACAGCGCAAGAAGCGTTGCAATATCAATTAGCATTAAGCTACCAACAAGATGCTTTATCGATTGCCATGAC
GGCTTATATGCATGATTACGATAGCCAACATGTGAGCTGTATGCAGGGCATGATATGTGATTATGAACAAATATCATTAC
AAGAGAATATTAAGGATGTTTCTGTTGTCGGCGCAGATTTGAGCATAGCGTATGGACTAACATTTGATCACTTTTCAATT
CCCTTCAAAGCCAAATACCAATATACCCAAGCTGAAACAGACAATGCTAATTGCAATGAATTGATGGCATGTTTTGCCGC
TGATAGCCAATTACCTTGGGTACCAGAACAACAATTGACGTTAAGTTCTGGGGTTGTTTACGGCAATATGTCCATTATGG
CGCAAGTTTTGTATCAATCGGAGTTAGGTTATCAAGGTGGGTTTACCAATGAGCGCGCTATCGATAGTCAATGGAAGGTT
GATATCGCCGCTACTTACCGTTTGACCGAGCAGCACGAGTTGTATGTTCGTGTTGAGAATTTGTTAGACGAAGAGTTAGT
GGCAAATCGCACTGCAATGGGATTCCAAGGACAGTCTGAAATGACCACATACTTTGGTTATCAAGGCCATTTCTAG

Upstream 100 bases:

>100_bases
TTATGTAACTGAAACCGTTATTGTAATGGACGAATTTTACTAACTGATTCGTCATTTTAAGCGATTTTTTGCGTGAACAG
ACACATATACGGAGATTAAT

Downstream 100 bases:

>100_bases
GTGGTCTTTTCTAGGCATAAGCAATGTTGAATAATATTTAAACGCTGCTTGCTGTGCCTTTTATTTCCAAATACCAATAC
TGCTCAAGTGATGACTCACT

Product: TonB-dependent receptor domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>691_residues
MSNHPFSLSVIAAAVLYVCHSTNAVAETVTESIDNLNNQLDLQQSSISQFHYRQSDIALGLTGATVLPTGPNQDITITHA
GATDGVAILQDGIFFSPAPYSGQHLVLQPNLMHQQKVSFSSMTSVTESSQAAFGKLDYQSVQISPQKYATDVNVEGSDNN
AINGGAVLSGTSKQNGMLLAVDYQSASDDVGYRVARDADSTQKDILFKIAADSLPGARNQQTTEFSYQYSSQEADRGALG
LTSVDFSVNPTQLYSAASTDNTEGERQRYVLAHQLIMSSTSTMATDFYYQTYSQQSQEMQFVDGEQVNNALLSRIAMFET
TPTTDGMNLGALTQNNDFSGFGMQTKGVSMYGQHQVTYSARYHTDKAEMRLGQREWSWNNDLSLTPTTDDEYALTYTDDA
SAFSSAVDTKLNYGQWSINLGLGYEHVSVSRELGDVNTSLNAADFSDDGWSPSIEVAYQSGPWLAALQAKQAWTAASAGN
IEQTAQEALQYQLALSYQQDALSIAMTAYMHDYDSQHVSCMQGMICDYEQISLQENIKDVSVVGADLSIAYGLTFDHFSI
PFKAKYQYTQAETDNANCNELMACFAADSQLPWVPEQQLTLSSGVVYGNMSIMAQVLYQSELGYQGGFTNERAIDSQWKV
DIAATYRLTEQHELYVRVENLLDEELVANRTAMGFQGQSEMTTYFGYQGHF

Sequences:
NA

Specific function: NA

COG id: NA

COG function: NA

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA