Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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Identifier: 114561972

GI number:

Start: 929140

End: 933360

Strand: Reverse

Name: Not Available

Synonym: Sfri_0792

Alternate gene names: NA

Gene position: NA

Preceding gene: 114561973

Following gene: 114561969

Centisome position: NA

GC content: NA

Gene sequence:

>4221_bases
ATGATTGATATCACTATCGACGGAACAACACTTTCGCTTCCTAAAGCAGACAGCTTATTAAAGGCAGCAAAAAACGCCGG
TATTAACATCCCTAGCTTATGTGATTATTCTCATCGCCAAGAGAGACAACACTGCAATTTGTGCCAAGTACAAATCAAAA
ACCATGATGGTAGTTTACGATGTGTTCGCGCCTGTGAAACACCGCTAGAAACTGGTTTAGAGGTCATTACTCAGTCGAGC
CACTTAAGCCATCTTCGTCAACAAGCACTCAAAGATATTCTGAGTGATCACTTTGCGGATTGTGAAGCACCTTGCCAAAC
TGCCTGTCCTGCCGGCGTTGACGTGCAATCGTATCTGTATCATATCGGCAGAGGCGATCATAAAGAAGCCGTCAAAGTCA
TCAAGCAAACCTTACCTTTACCCTTGTCTATTGGCCGTGTTTGCCCCGCTTTTTGTGAAGCCCAGTGTCGCCGCGGACTG
GTAGATGAACCTGTGGCGATTCGTCAATTAAAACGTCATGCAGCAGACTTAGATTTACAAGATGCAGAGTCTTATGTTCC
TCCAAAAGCACCAGCCACAAACAAGCGCATTGCCATTATCGGCAGTGGCCCTGCAGGATTAACCGCGGGTTATTATTTGT
CTAATAATGGCCACGATGTGACCATTATGGAGTCGGCTCCTAAAGCTGGAGGCTGGTTACGTTACGGTATTCCTGAGTAC
CGCTTACCTAAAGATATACTCGATAAAGAGATCGAACTGCTCACCCGCAACGGACTTAAAATTGAAACGGGAGTTGAACT
GGGTCGTGATACCAATTTAACCGAATTAGTGGCCAATTATGATGCGGTTTGCCTCGCGATTGGTGCGCAAAAAGCCGTGC
CAATGAATTACCCTGGCAGTGATTTAATCGGTTGTTATTTAGGTGTGGACTATTTACGCGATTATTGCACCGACAAAAAA
TTCATTACAGGCAAAAAAGTGGCCGTCATTGGTGGCGGTAACACTGCGATTGATTGCGCTCGAACCGCTGTGCGAGATGG
TGCAGATGTGACCTTAATCTATCGCCGTAGCCGTGATGAAATGCCAGCGGAGCCCTATGAAATACATGAAGCAGAAGAGG
AAGGGGTTAAATTTCATTTTCTCACTAATCCCCTGGAAAACCACAGCGATGACCAAGGCCGGGTTAAATCCGTCACCTTT
GCTAAAATGGCGCTCGGCGAGCCCGATGAATCTGGTCGCCGCTCTCCCAAAGCGACTGGAGAAACCTTTGAAGAAGCATT
CGACACCGTAATACCTGCGGTATCTCAACAAGTGGATTTAGCCTTTTTAGACCAGCCAGAAAATCAAATAGACACTGGTC
ATATTGCCCTCACCCGCTGGCATACCTTCCTTGGCTGCGAGCAAACCATGTCTGCAGGGGTAGAAAAACTATTTGTTATC
GGTGACTCCCGCACTGGCCCTGGTACTGCTGTTGGTGCGGTAGCAGATGGCCGAAAAGCCGCTGAAGCCATTGAAGGATT
GTTAACTGAAGGCTTAACTTGTCATTTAGAACCTGGACTATTTAACTCACGAAAGGCCAACAAAACAGCCTCGTTATCTG
CTGAGATATACCCAGAGACAGCCAAGCGTCGCCGCTTAAAAATGCCAGAGCTAAACCAGCTCAATCGAGCGCTTAACTTT
GCCGAGGTAGAACTAGGATTCATTCCCGATGAGGCAATGAAAGAAGCGATGCGCTGTTTGGAGTGCGCTTGCCAAGCCAA
TACCGATTGTAAATTACGCGATTATGCCACCGAATATAAAGTCGACGGAAAAACACTGGATCAAACTCAGGCGCGTAAAT
TTAAAGTCGATAACAGTGCGCCTTTTATTACTTTCGATGCTAATCGCTGTATCAGTTGCGCCGCTTGTATTGATGCTTGC
CATCAACAAAGTGGTCATAACGTTATCAGCTTTGAAGCCAATAGTTATCAAGCACTACCCGATGCTGCAACAACAGGCAT
TAGCCGCAACGCCCCTCGTGTTGGCTTTACTGCGTCGATGAATGACAGCGATTGTGTGCAATGCGGTAACTGTGTTCAAG
TTTGCCCTACTGGCGCTTTGGTTGATGCCCGCGATAAAACCCAAGGTAGCGACAGAGCGTTAACCAAAACCTCAACCGTG
TGCACATATTGTGGCGTTGGTTGCCGGGTTGAACTGCATGTCGATCAGGACAAAAATCATGTAATGCGAGTATCTGGCGA
TACTCAATCAGTGGTCAATGAAGGCATGTTATGTGTTAAAGGGCGCTCTGGTTTTGATTTTTTAAACAGTCCTAAACGCC
TTACAACGCCATTAATTCGCAAAAATGGTCAGCTGCAACCCGCCTCTTGGTCTGAAGCCATTAGTTATATAGCACAGCAA
CTGCAACCGATTAAAGATGCCGCTGGGCCAAGCAAGTTTGCTGCATTGTCTTCAGCTAAATGCACCAATGAAGAAAACTA
TTTAATGCAAAAATTCACCCGTAGCATTATGGGCACCAACAACATTGATCACTGCGCACGATTATGTCATTCATCGTCTG
TCGCAGGGCTATCCGATACCATTGGCGGCGGCGCAATGACCAATGATATTCCCAGCATTAAAGACTCAGATGTGATTTTA
ATTATAGGATCCGATACCACCAGCGCCCACCCTATTATCGCCTCGCATATTAAACGAGCCGTTAGCCAACACGGCGCGCG
CTTAATTGTCGCGGACCCAAAGAGAACGGCTATTGCAGACAGTGCCCATTTATATGTATCACATAAACCTGGCACAGATG
TGATGCTACTGAATGCCATCATGCAGCAAATTATCATCAATAACTGGCAAGACATGCACTACATCAATAGCCGTATTGAA
GACTATGAATTGCTCAAGCAAGAAGTGATGAAGCCTGATTACAGCTTAGTCAATGCAGCGTTAATTACTGGTGTAAATGC
CGAAGACATTGCCGCTATGGCTAAAATGATTGGCACAGCAAACAAAACTGCCTTGTATTATGCCATGGGAATTACTCAAC
ATACCTCAGGTTACGACAACGTTGTATCCACCTCCAACTTGCAATTGTTGTGTGGCAATATTGGCGTAACGGGCGGCGGA
CTAAACCCACTACGTGGCCAAAGTAATGTTCAAGGTGCTTGTGATATGGGCGCGTTACCCAATTATTATCCCGGTTATCA
GCAAGTCGATAACCCACTCAATAACGTTAAATTTGCCAAAGCTTGGGGCAATACATCGCTAAATTCAGAGATAGGATTAG
CAGCAACAGAAATCATGCAGGCGATTGTGAAAGGTAAACTCGATGCTCTGTATGTTTTGGGAGAAAACCCAGTGCTAAGC
GATCCGGACCAAGCTCATGTCATCGCTGCACTATCCAAAATTAAATTTATGCTGGTGCAAGATATCTTTTTAACCGAAAC
CGCGCAGATGGCTCATGTGGTATTACCCGCAACCGCCTTTGCCGAAAAAGATGGCCATTTCACCAATACAGAACGTCGGG
TACAACAATTACGTGTCGCGTTAACCCCTCCGGGGGATGCGATTGTAGACTGGAAAATTATCCAAATGATTGCCAACAGC
CTTGATGCTAATTGGCATTACCACAGCACCAAAGATATTTGGCAAGAAATTAACCACGTCACCCCGCAATATCAAGGCCT
TACCTGGCAACGACTTGAACACAAGGTAGATGGTATACAGTGGCCATGCTTTGATGAAAACCATCCTGGCACACCGATTT
TGCATACCGAAACATTTTTACGCGGTAAAGGCAGAATGATGCCAGTGAGTTATCGACTACCTGCCGAAATGCCCGATAGC
GAATATCCATTAACCCTTTCAACAGGCCGTTTACTGGAACAATTCCATACTGGCACTATGACGCGCAAAACCCCGGAACT
GGATATTAAAGGCTCGCCCAGAGTAATGATTTCGGTTTTTGATGCCGAACAATTGGGAGTCAATAACGGTGATATGTTGA
AACTGAGTACTCGCCGCGGAGAAATAGATATAGCCGCCTTTGTGACTAAGCGGGCTCAGGTAGGAGTATTATTTTTACCA
TTCCACTTTGCCGAAGCCGCAGCCAATAAACTGACCATTAATGCATTGGATCCCATTGCAAAAATTCCAGAATATAAGGT
GTGTGCTGTTAAAGCAGAAAAGTCACTGCAGCCAAGGGGCGCTACGCTGCTAGGTCGCTAG

Upstream 100 bases:

>100_bases
ATTTTAGGTTTAGTTGTTTATCCCTATTGACGCCCTACTCGTCCCATCCTCAAAGGCATTAGACTTTGCCCGTAACTCAA
AAAATTGAAAAGGCTTTGCA

Downstream 100 bases:

>100_bases
GTCGCTGCGCGGCTAGATCCTATAAAATCAAGAATCTAAGACGCAAGTCCGCTCTAGTTGCGAAGCGACCCTAGCAGGAC
GTAAGTCCGCCCTAGCAGCG

Product: formate dehydrogenase, alpha subunit

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1406_residues
MIDITIDGTTLSLPKADSLLKAAKNAGINIPSLCDYSHRQERQHCNLCQVQIKNHDGSLRCVRACETPLETGLEVITQSS
HLSHLRQQALKDILSDHFADCEAPCQTACPAGVDVQSYLYHIGRGDHKEAVKVIKQTLPLPLSIGRVCPAFCEAQCRRGL
VDEPVAIRQLKRHAADLDLQDAESYVPPKAPATNKRIAIIGSGPAGLTAGYYLSNNGHDVTIMESAPKAGGWLRYGIPEY
RLPKDILDKEIELLTRNGLKIETGVELGRDTNLTELVANYDAVCLAIGAQKAVPMNYPGSDLIGCYLGVDYLRDYCTDKK
FITGKKVAVIGGGNTAIDCARTAVRDGADVTLIYRRSRDEMPAEPYEIHEAEEEGVKFHFLTNPLENHSDDQGRVKSVTF
AKMALGEPDESGRRSPKATGETFEEAFDTVIPAVSQQVDLAFLDQPENQIDTGHIALTRWHTFLGCEQTMSAGVEKLFVI
GDSRTGPGTAVGAVADGRKAAEAIEGLLTEGLTCHLEPGLFNSRKANKTASLSAEIYPETAKRRRLKMPELNQLNRALNF
AEVELGFIPDEAMKEAMRCLECACQANTDCKLRDYATEYKVDGKTLDQTQARKFKVDNSAPFITFDANRCISCAACIDAC
HQQSGHNVISFEANSYQALPDAATTGISRNAPRVGFTASMNDSDCVQCGNCVQVCPTGALVDARDKTQGSDRALTKTSTV
CTYCGVGCRVELHVDQDKNHVMRVSGDTQSVVNEGMLCVKGRSGFDFLNSPKRLTTPLIRKNGQLQPASWSEAISYIAQQ
LQPIKDAAGPSKFAALSSAKCTNEENYLMQKFTRSIMGTNNIDHCARLCHSSSVAGLSDTIGGGAMTNDIPSIKDSDVIL
IIGSDTTSAHPIIASHIKRAVSQHGARLIVADPKRTAIADSAHLYVSHKPGTDVMLLNAIMQQIIINNWQDMHYINSRIE
DYELLKQEVMKPDYSLVNAALITGVNAEDIAAMAKMIGTANKTALYYAMGITQHTSGYDNVVSTSNLQLLCGNIGVTGGG
LNPLRGQSNVQGACDMGALPNYYPGYQQVDNPLNNVKFAKAWGNTSLNSEIGLAATEIMQAIVKGKLDALYVLGENPVLS
DPDQAHVIAALSKIKFMLVQDIFLTETAQMAHVVLPATAFAEKDGHFTNTERRVQQLRVALTPPGDAIVDWKIIQMIANS
LDANWHYHSTKDIWQEINHVTPQYQGLTWQRLEHKVDGIQWPCFDENHPGTPILHTETFLRGKGRMMPVSYRLPAEMPDS
EYPLTLSTGRLLEQFHTGTMTRKTPELDIKGSPRVMISVFDAEQLGVNNGDMLKLSTRRGEIDIAAFVTKRAQVGVLFLP
FHFAEAAANKLTINALDPIAKIPEYKVCAVKAEKSLQPRGATLLGR

Sequences:
NA

Specific function: NA

COG id: COG0243

COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA