Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 114561843

GI number:

Start: 764724

End: 767876

Strand: Reverse

Name: Not Available

Synonym: Sfri_0658

Alternate gene names: NA

Gene position: NA

Preceding gene: 114561844

Following gene: 114561842

Centisome position: NA

GC content: NA

Gene sequence:

>3153_bases
ATGGATACTAATAAAGGAATTATCGCCTGGTTTGCCCGCAACAGTGTCGCCGCCAACTTACTGATGGCAGCCTTGCTTAT
TGGCGGTTTGTTTAGTGCTGTATTGATTAATAAAGAAATATTTCCAACATTTGAATTAAACCTCATCAATATCAATGTGG
CCTACCCCGGTGCTGCGCCACAAGAAATTGAAGAAGGGATTAATATAAAAATTGAAGAGGCTATTCAAGACATAAGCGGG
ATTAAAAAAGTCACTTCTGTTGCCAGTGATAGTGTTGGCTCAGTGACGATTGAAGTCGAAGACGGCTACGAAGTACAGCA
AGTTTTAGATGAAGCCAAGCTGCGTATCGATGCTATTGCGACCTTTCCAGATAACATCGAAAAACCCAATATTTACCAAA
TAAAGCCAGAAAACAATGTCATTTGGGTGTCGGTCTATGGCGACATGACCTTGCATGACATGAAAGAAATGGCGAAGAGT
ATACGCGACGACATTACCGATTTACCCGCGGTCACTCGAGCAAAAGTTACTGGTGTTCGTGACTACGAAATAGGCATTGA
ACTGTCTGAAGACAAATTACGTGAATATGGTATTACGTTTACCCAAGTCGCTTTAGCAGTACAAAACTCATCGATTGATT
TACCCGGTGGCTCTATTCGTGCCCAAGACGGTGACATCTTACTACGTACAAAAGGCCAAGCTTATACTGCAGATGACTTT
GCTCAAATTGTAGTAGAAACCCGTGCTGATGGCAGCCGGATTATGTTACCGCAAGTGGCCACCATTAATGATGATTTTGA
AGAACGTTTAGAGTACACCCGCTTTAACGGCAAACCTGCTGCCGTGATTGAAATTACCAGTATCGACGATCAAAATGCGT
TAGATATTTCTTCGCAAGTTAAAGCTTATGTTGCCGAACGTAAAAAGAGCTTACCAAGTAATATTCAACTTGATACCTGG
GGTGATTTAACTCACTACCTGCAAGGCCGTTTAAACATGATGTTGTCGAACATGTTTTATGGCGCCCTGCTGGTATTTAT
TATTTTGGCTTTGTTCTTAGATCTTAAACTCGCTTTTTGGGTCATGATGGGCTTACCGGTGTGCTTTTTGGGCACCATGC
TACTGATGCCACTTGAGCCGTTTAACATGTCGATTAACATGCTGACCTTATTCGCGTTTATTCTGGTGCTGGGGATCGTC
GTCGACGATGCCATTGTCATCGGCGAAAGTGCCTATACCGAGTTAGAAGAAAACGGCCACTCGTTGGATAACGTCGTAAA
AGGTGTGCAAAAAGTAGCCATGCCCGCCACATTTGGGGTACTCACCACCATTGCCGCCTTTATCCCAATGATTATGGTGT
CTGGGCCCATGGGGATTATTTGGAAATCCATCGGTATGGTGGTGATTTTGTGTTTAGCATTTTCGCTGATCGAATCAAAA
CTGATTCTACCCGCACATTTAGCTCACATGAAAATCAAAAAACGCACAGCACCAACCCATTTTTTATCGCGGTTTAAATT
TGCCCTCAACGAATGGTTACAGCATTTCATTCATAACGTCTATCGTCACTTTTTAGAGCGTTGCATTAAACAACGTTACA
GCGTGGTGGCAGTGTTTATTGGGGTACTGATTTTGTCGATTGCGTTAGTGCAAAGTGGCAAAGTGCGTTGGGTTTTCTTC
CCTGATATTCCATCCGATTTTATTCAAGTACAACTTGAAATGGAAGAAGGCAGCTCTGAACAAAACACCTTAAAAGTGCT
GCAACAAGTCGAAGATGCGTTGTACAAGATGAACGCCAAACTTGAAGAGCAATACGGTTACCCAATGGTGAAACACAGCT
ACATTGAGCTTAGCTCACGCAGCAGTGCGTTTGTGTTTACCGAACTGACCAAAGGCGAAGACCGCGAAGTCGACGGCGTC
GCAATTGCAGAAGAATGGCGTAAACAACTGCCCGAGTTATTGTCAGTTAAAAAGCTTAACATCAATGCCAGTACCAACGA
TGCTGGCGGAGATTTATCATTCCGCTTAACGGCAACCGACCTAGGCCAGCTATCTGAAGCGGCCAAAGTACTTAAGGCTA
AACTGGCCACTTATGAAGGCGTGTATGATATTACCGATAACTTCTCATCCGGTTCACACGAAATACGACTAAACATTCGC
CCAGAAGCAGAAGCACAAGGACTAACACTGTCTGATTTAGCTCGCCAAGTCCGTTACGGCTTTTATGGTTATGAAGCCCA
ACGTATTTTACGTAATAAAGAAGAAGTGAAAGTCATGGTGCGTTACCCATTAGAACAACGCCGTACTGTGGGTGATCTTG
AAAACATGCTTATCCGCACTCCGTCTGGCGCGGCGGTGCCATTCTCAACCGTAGCAGATATCGAATTGGGCGAGTCATAT
GCGTCTATTACTCGTGTCGATGGCCGACGTGCTATCACCATTACCGCCAATGTGAATAAAAACAATGTTGAACCATCGAA
AGTGGTCGCTGAAATTCAGGAAGATTTTTTACCTGAACTCACAGCACGATTCCCTAAAGTGGCTTCAGCATTAGATGGCG
GCAGCTTGGATGAACAAAATGCCATGCTAGGGTTAGCGCAGGGCTTCTTTTTTGCCATGTTTACTATTTATGCCTTAATG
GCTATTCCATTAAAGTCGTACACTCAACCACTCATTATCATGTCAGTGATCCCGTTCGGCATGATTGGCGCCTTGTTTGG
TCATTACATTCTTGGCTTATCCATGAGTGTATTGAGCTTATGCGGTATTGTGGCGTTAGCTGGGGTAGTGGTAAACGACT
CGCTTATTTTAGTCGACTTTGTTAACCGAGCTCGTGAAGAAGGTAAGTCGCTAATGCAATCAGCTATCGACTCGGGTTGT
TATCGCTTTAGAGCAATTATCTTAACTTCGCTAACCACCTTTGTTGGCTTGGTGCCGATTATTATGGAGAAAAGCTTACA
AGCTAAAATTGTCATCCCAATGGCGACATCATTAGCTTTCGGTATTTTGTTCTCTACTGTAGTGACGTTAATTTTAGTGC
CTATTTTGTACATTATTCTTGATGATATAAAACGCCTATTAAGACGATTTTATATTTGGTGGTGGCAACCTAAACCTGCT
GAAAGTGAGTTCAGCTCTGACGAGCACCATTAA

Upstream 100 bases:

>100_bases
GCTTGAATTCAGGACAGGTTATCAAAGTACTGGGCGAAGAAACCAAGACTGAACCAGTCGATACTGACACCCAAGCCGCT
ACGACTGCAGGTGAATAATA

Downstream 100 bases:

>100_bases
TCGAATTAATCCCGATTGTTAACAAAAAAAACAGAGCTAACTTAGCTCTGTTTTTTTTGCAGTAAAATCTGCGAGCTGAG
CAACATAGTCACTATTAAAA

Product: acriflavin resistance protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1050_residues
MDTNKGIIAWFARNSVAANLLMAALLIGGLFSAVLINKEIFPTFELNLININVAYPGAAPQEIEEGINIKIEEAIQDISG
IKKVTSVASDSVGSVTIEVEDGYEVQQVLDEAKLRIDAIATFPDNIEKPNIYQIKPENNVIWVSVYGDMTLHDMKEMAKS
IRDDITDLPAVTRAKVTGVRDYEIGIELSEDKLREYGITFTQVALAVQNSSIDLPGGSIRAQDGDILLRTKGQAYTADDF
AQIVVETRADGSRIMLPQVATINDDFEERLEYTRFNGKPAAVIEITSIDDQNALDISSQVKAYVAERKKSLPSNIQLDTW
GDLTHYLQGRLNMMLSNMFYGALLVFIILALFLDLKLAFWVMMGLPVCFLGTMLLMPLEPFNMSINMLTLFAFILVLGIV
VDDAIVIGESAYTELEENGHSLDNVVKGVQKVAMPATFGVLTTIAAFIPMIMVSGPMGIIWKSIGMVVILCLAFSLIESK
LILPAHLAHMKIKKRTAPTHFLSRFKFALNEWLQHFIHNVYRHFLERCIKQRYSVVAVFIGVLILSIALVQSGKVRWVFF
PDIPSDFIQVQLEMEEGSSEQNTLKVLQQVEDALYKMNAKLEEQYGYPMVKHSYIELSSRSSAFVFTELTKGEDREVDGV
AIAEEWRKQLPELLSVKKLNINASTNDAGGDLSFRLTATDLGQLSEAAKVLKAKLATYEGVYDITDNFSSGSHEIRLNIR
PEAEAQGLTLSDLARQVRYGFYGYEAQRILRNKEEVKVMVRYPLEQRRTVGDLENMLIRTPSGAAVPFSTVADIELGESY
ASITRVDGRRAITITANVNKNNVEPSKVVAEIQEDFLPELTARFPKVASALDGGSLDEQNAMLGLAQGFFFAMFTIYALM
AIPLKSYTQPLIIMSVIPFGMIGALFGHYILGLSMSVLSLCGIVALAGVVVNDSLILVDFVNRAREEGKSLMQSAIDSGC
YRFRAIILTSLTTFVGLVPIIMEKSLQAKIVIPMATSLAFGILFSTVVTLILVPILYIILDDIKRLLRRFYIWWWQPKPA
ESEFSSDEHH

Sequences:
NA

Specific function: NA

COG id: COG0841

COG function: function code V; Cation/multidrug efflux pump

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA