Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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Identifier: 114561780

GI number:

Start: 692154

End: 693593

Strand: Reverse

Name: Not Available

Synonym: Sfri_0594

Alternate gene names: NA

Gene position: NA

Preceding gene: 114561786

Following gene: 114561776

Centisome position: NA

GC content: NA

Gene sequence:

>1440_bases
ATGTTAAAACCCGCGCTAATGTCATTAGCCATTATCATTGCGGCGATGCCAGCGATGAATGCCTATTCGGCAACATCACA
AGAATTATTTTCTGAGCCCAAAGAGGTAAAAGACACAAAAAGTGAACTTAGACACTTCACGCCGGTGCAATTGATCACGG
CAATTGATGACAAAAACATTCAGTCAAAAGAAGTAAGAGGTAAACTGACTAGAACCAACTATGAGCTATCGCCGTCTTAT
ACGCCGGCTCATTTAATCAATAACTATAAAAAACAGCTTAACGCGCTCAATGCCGAGATCATTTTTGAATGTGAACAAGC
AAGTTGTGGTGATGAACGTAAGCTATCTTCATTTATCTCGCCTTTGACAAATATTTCCAGTAGCTTGCCATCATTAATAA
CAGCACATATTACCCTGCCTAAAAAACAAGTTTATGTGTCGATATATGCGATTAGCTGGCAGAATGCTACCAATTTAGAA
TTGGATATTATAGAAGTCATCGCTGAGCCATTAGATTTGGTGGCCACTAATCAAAGTTATTTATCACAAGCTGTGAGTGA
AATAACGGTTAAAGACAATAGCGATAAAGATACTAAAAACTCGGCTGACCACCCAATGCTTAGCAGAGTCGCTGGAGCTT
ACATACAGGAATATATGACTCATGGCTTTAACCAAACCATGGTACTTGCTGGAGATAACTATAAAACGTTGGAACTGGAA
GGGAAAGTTACCGATATTACATACATATTGCCACGTACTTACTCAGAATTTGAGATTGATGCAAACTACCATAACGCATT
AACCAAACTTGGTTTTACGGAAGTTTATACCTGTTTAGGGAAGGAGTGCGGAAACGAAGATACATTAGAAACTAAGATAG
CATTACATTCAGCAATTGGTCGCGAAGAAAACCAATTTTATAGACTCTGTAAGTTAGAAAGAGCTGAAGGTAATGTTTAC
GCTATGGTTTACGTTATTGGGTTTTCAGGGCGATTATCCGCTGAAATCAGGATCATTGAAGAAACCACATTAAACAATAA
CCGTGTGGGAATTGATTTGCAGGGCTTAACTGACGAGATAGCCAAAACGGGCCATGTGGCACTAGACGGTTTGTTGTTTA
AATATGATAGCGATGAATTACTGCCAGAAGCTTATCCGATTGTTGAAGTGGTAGCTCAATACCTACAAACACACCCTAAA
CAGCTGTTTTATGTTGTAGGACACTCAGACGACCAGGGCTCGCAAGCTTATAACCAAACCTTGTCAGAAAAACGCGCGAC
TGCAATTAAAACCCGTTTGATTAAACAGTTCTCTATTTCTGCACAACAAGTTGAAGCCAAAGGGGTTGGTGAGTACTCGC
CTATTGCCAATAATCTTGATGAAGCGGGCCAGAAACAAAACCGCCGCGTTGAGTTAGTGATACGTTCAGATAATAAATAA

Upstream 100 bases:

>100_bases
ATAGCAATTCATTTACACCCTAGTGATGTTTGAATATCTTATGGGGACTTAATGTTTTTTCTCAATATTACTGGATACTT
TATTTCAACAGGGAGTTGAT

Downstream 100 bases:

>100_bases
CCTCTGCTACGGATAATAGATAATTATCTCACTGGAGAAGTAATCATAGAAAGGTAGCCTAGACTACCTTTCTATTAACT
AAGAACATTTTACTTACCAG

Product: OmpA/MotB domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>479_residues
MLKPALMSLAIIIAAMPAMNAYSATSQELFSEPKEVKDTKSELRHFTPVQLITAIDDKNIQSKEVRGKLTRTNYELSPSY
TPAHLINNYKKQLNALNAEIIFECEQASCGDERKLSSFISPLTNISSSLPSLITAHITLPKKQVYVSIYAISWQNATNLE
LDIIEVIAEPLDLVATNQSYLSQAVSEITVKDNSDKDTKNSADHPMLSRVAGAYIQEYMTHGFNQTMVLAGDNYKTLELE
GKVTDITYILPRTYSEFEIDANYHNALTKLGFTEVYTCLGKECGNEDTLETKIALHSAIGREENQFYRLCKLERAEGNVY
AMVYVIGFSGRLSAEIRIIEETTLNNNRVGIDLQGLTDEIAKTGHVALDGLLFKYDSDELLPEAYPIVEVVAQYLQTHPK
QLFYVVGHSDDQGSQAYNQTLSEKRATAIKTRLIKQFSISAQQVEAKGVGEYSPIANNLDEAGQKQNRRVELVIRSDNK

Sequences:
NA

Specific function: NA

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA