Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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Identifier: 114561734

GI number:

Start: 627964

End: 632517

Strand: Direct

Name: Not Available

Synonym: Sfri_0548

Alternate gene names: NA

Gene position: NA

Preceding gene: 114561722

Following gene: 114561735

Centisome position: NA

GC content: NA

Gene sequence:

>4554_bases
ATGACCAGCAAAAAGCAGCCCGCTAACAAGACTCAAGCACTATCGGCTGACCCACTTTTCTTACAAGCTGAACACTTGGC
TAAAGACTTTTCATTATTTCCTGCTCATAACAAGCAGAGTTTATCTGAAGAAGTGAAAGGATTATTAACAGAAGATTCCA
TTCAATCAAACTTGAAAAGTTTGGCATCTTTAGACGTTGACGGTTATGTCAATAAAGTTATCCAACCGACCTTGGATAAA
AACCGCCCAGGCGCGAAGCGAATGATCGCTGACTTAAAAGGCAAGATTATTGCCGAAAGTCATATCGGACCGTTTTATCG
TGCTGAAGTGGAACTTAATTTTGGTACTCGTACTCGCCGTATCGGTTTTATTGCGCAAGAGCGCACGACCGCAAACGGTG
CATGGATGCCTGAACACCATCTTGCAGCATGTAAGGCAATCCGTCATTTCGCTGAATTGTCTATGCCGATTGTATATTTA
ATCGATACTCCTGGTGCAGATGCAGGGGAAATTGCTAATAGCCAAAATCAAGCGCATACCATTTCTAAAGCGATTGCTGA
AAGTGCTAATGTTGATGTACCGACAGTCGGTATTGTGATTGGTGCAGGCTATTCTGGTGGTGCAATTCCATTAGCTGCAG
CGAACATTCTATTATCTGTACGAGATGGTATTTTTAACACCATTCAACCACAAGGTTTGCAGAGCATTGCGCGTAAGTAC
AACTTGTCATGGCAGGAATGTGCTAAATCGGTAGGCGTGTCACCAGAAGAGTTGTATACCGCTGGGTGTATTGACGGCAT
TATCGATTTTACTCCATCAGATAAAGATGAGCGTCAGCATAATTTCCGTCGTGCGATTATCAGTTCTATTGAAGCCGTTG
AACGTGCTGCAATGAACTTTGTACGCGAATCTACAGATTTAAGAGAGCATTATGATCGCAGTTTACAGCGTTATTTAGCG
CCGTCGGCTAATCTGCTCACGCTTGAAAATAATACCCGCTTATCTGTCGCCAATAACCCAACGATGTACCACAATATTTT
TGGTAGTGCATATCGTTATTTACGTTATTTGACCTTGCGTAGCCGCATTCATTCAATCTCACAAGAACAGTACGGTCGCT
TATCAAAAGTGAGCGTGCCAGAAGGTGATTTGTTAGCGCGCATTAAGCAAGAACAAGAACGCGTGTTCCAGGCGTGGTTA
ACCAACCCTGATAAGCTCGTTTACGATGAAGAACTGAATAAACTTTGGGGTACATTCAGCGCTAAACGTAAAGACATTTC
TGCAGAGCGTAACGTGATTACACGTTTTATTTTGGGTGAACCAAAAGAGAACTATAAAAAAGCACGTAAAGCATTGTTAT
TTAACATTGGTTGGTCGTTATACCATCGCTGGAAAAGTAACGCCGCTAACAATTTCAATGGCTTAATTAAGCATTTAGAG
TCACTGCCTAAGTCTACAACGCAAGCTCCATGGCCTGAGCTAAGCCAGCTTACCGTGTTGGATATTGTGGTTAATGACGA
ATTACGCGCAGACTTTATTTGGCAGTGTCATAACGTGCTTATTTTCAATGCGCTATATGACAATGTGGTAGGCAGCTTGG
CATCAATTTCGAAAGAAGCCATGATGTCAAAAAGTTTGTCTCGTGAATCAGTGGATAAATTACTCCACAAATCAATTGAT
AACGCATTATCGACAAGCGACAAAGCTAATGACAAGAGCAAGTTCTATAAGTGGCTTAAATACTTTATGGATCAATCGAA
TCGTGCTGAATTGCTTACTCGTGTAGAGCAATGGAAGAGTGTGGGTTTCCCACAGTTAAACGATTCGTTATTTGTAATCT
TAACTTATTTCTTCGAGCGTTTATTACCAGAGTACTTTGATAGCGAAGATGAACACGATAAATACACCGGTACAATTAAC
CCTGTACGTATTGGTCGTCGTAAAGATTTTTGGAACCGTTTAACAATGGGTTACCAAGACTTACTGATCCAAAAAATACT
TCGCGAAGAGAAAAAGCAAGGCAAGATGGGCTGGGAAAATATTATCAAACAGTTCTTTACTAAGTTTGATGAAATTGATG
CCGACAAAATGTCAGCTAACATGCTTAACTTCCCTGGTTTCCGCTTATCGATTGAAGATGCTATTGATAAAAAGATCCGT
CCTTGTGGTTTAATTACTGGTCTGGCTGACTTTAATAATAACGGCAGTAAGTTACGTGTTGGTGTTGCTGTTTCAAATAC
GGCATTCCAAGCAGGTGCATTTGATATGGCCAGTGCTGAGAAATTCAGTTCGCTATTAATTGAATGTGCTAAACGTAAAT
TGCCGGTAATTTGTTTTATCAGCTCTGGTGGTATGCAAACCAAAGAAGGTGCTGCGGCATTGTTTTCAATGGCGGTCGTG
AACGACCGTATTACGCGCTTTATTCGTGATAACGAATTACCTGTATTGATGTTTGGTTTTGGTGACTGTACTGGTGGTGC
TCAAGCCAGTTTTGTAACCCATCCTTTAGTGCAGACTTACTATCTTTCTGGTACCAACATGCCGTTTGCTGGTCAAATGG
TAGTGCCTGCGTACTTACCATCTACAGCAACATTGTCGAACTACTTATCTAAAGTGCCAGGGGCAATGACTGGGTTAGTT
CATAATCCATTTAGCGACACCTTAGACACTCAGTTGTCGGGTATTGATCCACTAATGCCATTACCGACAATTAATATAGA
AGAAGTGATCAGCAAAGCGTTGTCGACTTTAGTGCCTGAAGTGATTGAGCTAGAAGACGTTATTGTACAAGACGATCCTC
GTGCATTGATGAAGCCAATTAATAAAGTGCTGGTGCATGCTCGTGGTTGTACGGCAGTTAAACTGATTCGTAAAGCACAT
GACAACAACATTAATGTAGTGTTGGTGGCGTCAGATCCAGACATGACATCTGTTCCTGCAGATATGCTGAAAGACACTGA
TAAACTTGTGTGTATTGGCGGTAATACTTCAGATGAAAGTTACCTCAATGCTTACTCAGTATTGAAAGTCGCTGAGTATG
AAAATGTTGATGCGTTGCACCCAGGTATTGGTTTCTTATCAGAAAGCCCACAGTTTGCGGCATTATGTGTTAACAATGGG
GTCAACTTTGTTGGTCCTAGCGTGCATTCAATGACGACCATGGGTAACAAATCTAATGCTATCCATACTTCTCAAAAGCA
AAATGTGCCGGTTGTTCCTGGCAGTCACGGTATTTTGACTAACGCAGAACAAGCTGTGAACGTAGCGTCTGAAATTGGTT
ACCCTGTGCTGTTAAAAGCGGTGCAAGGTGGTGGCGGTAAAGGTATTCAGGTCGTTAAACGCCCTGAGGACATGATTGGT
TTCTTCCAGAAAACAGCGACAGAAGCCGCCGCGGCATTTGGTAATGGTGATTTGTATTTAGAAAAATACGTTACATCATT
GCGTCATATTGAAGTGCAGTTACTGCGTGATAAGTTTGGCAATACTAAAGTATTGGGTATTCGCGACTGTTCAGTACAAC
GTAATAACCAGAAAGTGATTGAAGAGTCTGGTTCAACGATGTTGCCTGAAGAGCTCAAACAGCGCGTGATGGAATACACT
CGTGCATTAGGTGATGCGACCGATTACATGGGTGCAGGTACCGTTGAGTTTATTTATAACTTAGATGCTAACGAAGTGTA
CTTCATGGAAATGAACACACGTCTTCAAGTTGAACATCCGGTTACTGAAGCGACATCTGGTATTGATATTGTAAGCGCGC
AGTTTGATATTGCTGCGGGTCGTTCAATTGAAAATCTAGAACCCGTAGACCAAGGTTACGCCATGGAAGTGCGTGTGACT
GCGGAAAAAGCGGCGCTTGATAGCCACGGTATTCTTCAGCTTATTCCTAATCCAGGTAAAATCACTGAATGTGTATTGCC
TCAGCGTGACGATGTCGAAATTATTTCGATTGCAGCAGCAGGTAAGGAAGTATCACCATACTATGACAGCTTGATCGCAC
AGATCATTATACGTGGTACTGACCGTGCCGACGTTGTGTCTAAAATGTATGCGTATCTCGATAGCGTAGTGATTAAAGGT
ATTGCGACTAACATTCCATTGTTGAAGCTTATCCTTAAAGACCCAACCTTCAACGAAGGGGTATATGACACTAACTACTT
GCCACGCTTAATGGCTGAGTTAGATATACCTGCACTGATTGCTGAAATGGAAGCGGCAGCAGAAGCACTTGAGGTTGATA
CTGAATCATTACGTGTTGGCGAAAGCAACGAGTTGAAAGTATTGGCTCAAGGCGCAGGTATTTTCTATACATCTCCAGCA
CCAGGTGAAGCAGACTTTGTTAAAGAAGGTGACATTGTCACGGTTGAACAAACATTGGCATTGATGGAAGCAATGAAGAT
GTTCTCTCAATTAACGTTAGCGGGCTTTAATCGTCAAACAGGTGTGTTATATCCTGAAGACCAAAAGTATCGTATTGAAC
GTATTCTTAATAGCAATGGACAGCAAGTTTCGCAAGGCGACTTACTGTTTGTGATATTACCCATCGAAGCGTAA

Upstream 100 bases:

>100_bases
AAGCGTCCAAGCTAGTTTATATGGTAATTTACCCATTAACAAAGTTATATTTACGGGCTAAAAAATTTTTTCAGAGGCTA
TATAAGCAGAGGATCTAAGG

Downstream 100 bases:

>100_bases
TACCTTCGATTGATTGTTGAATAAAATACCCGCTAAATAGCGGGTATTTTTTTGTCAGACTTTCGTATGTTGTAATACAC
TTAATAGCATATACACTTTT

Product: carbamoyl-phosphate synthase L chain, ATP-binding

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1517_residues
MTSKKQPANKTQALSADPLFLQAEHLAKDFSLFPAHNKQSLSEEVKGLLTEDSIQSNLKSLASLDVDGYVNKVIQPTLDK
NRPGAKRMIADLKGKIIAESHIGPFYRAEVELNFGTRTRRIGFIAQERTTANGAWMPEHHLAACKAIRHFAELSMPIVYL
IDTPGADAGEIANSQNQAHTISKAIAESANVDVPTVGIVIGAGYSGGAIPLAAANILLSVRDGIFNTIQPQGLQSIARKY
NLSWQECAKSVGVSPEELYTAGCIDGIIDFTPSDKDERQHNFRRAIISSIEAVERAAMNFVRESTDLREHYDRSLQRYLA
PSANLLTLENNTRLSVANNPTMYHNIFGSAYRYLRYLTLRSRIHSISQEQYGRLSKVSVPEGDLLARIKQEQERVFQAWL
TNPDKLVYDEELNKLWGTFSAKRKDISAERNVITRFILGEPKENYKKARKALLFNIGWSLYHRWKSNAANNFNGLIKHLE
SLPKSTTQAPWPELSQLTVLDIVVNDELRADFIWQCHNVLIFNALYDNVVGSLASISKEAMMSKSLSRESVDKLLHKSID
NALSTSDKANDKSKFYKWLKYFMDQSNRAELLTRVEQWKSVGFPQLNDSLFVILTYFFERLLPEYFDSEDEHDKYTGTIN
PVRIGRRKDFWNRLTMGYQDLLIQKILREEKKQGKMGWENIIKQFFTKFDEIDADKMSANMLNFPGFRLSIEDAIDKKIR
PCGLITGLADFNNNGSKLRVGVAVSNTAFQAGAFDMASAEKFSSLLIECAKRKLPVICFISSGGMQTKEGAAALFSMAVV
NDRITRFIRDNELPVLMFGFGDCTGGAQASFVTHPLVQTYYLSGTNMPFAGQMVVPAYLPSTATLSNYLSKVPGAMTGLV
HNPFSDTLDTQLSGIDPLMPLPTINIEEVISKALSTLVPEVIELEDVIVQDDPRALMKPINKVLVHARGCTAVKLIRKAH
DNNINVVLVASDPDMTSVPADMLKDTDKLVCIGGNTSDESYLNAYSVLKVAEYENVDALHPGIGFLSESPQFAALCVNNG
VNFVGPSVHSMTTMGNKSNAIHTSQKQNVPVVPGSHGILTNAEQAVNVASEIGYPVLLKAVQGGGGKGIQVVKRPEDMIG
FFQKTATEAAAAFGNGDLYLEKYVTSLRHIEVQLLRDKFGNTKVLGIRDCSVQRNNQKVIEESGSTMLPEELKQRVMEYT
RALGDATDYMGAGTVEFIYNLDANEVYFMEMNTRLQVEHPVTEATSGIDIVSAQFDIAAGRSIENLEPVDQGYAMEVRVT
AEKAALDSHGILQLIPNPGKITECVLPQRDDVEIISIAAAGKEVSPYYDSLIAQIIIRGTDRADVVSKMYAYLDSVVIKG
IATNIPLLKLILKDPTFNEGVYDTNYLPRLMAELDIPALIAEMEAAAEALEVDTESLRVGESNELKVLAQGAGIFYTSPA
PGEADFVKEGDIVTVEQTLALMEAMKMFSQLTLAGFNRQTGVLYPEDQKYRIERILNSNGQQVSQGDLLFVILPIEA

Sequences:
NA

Specific function: NA

COG id: COG0439

COG function: function code I; Biotin carboxylase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA