Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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Identifier: 114561639

GI number:

Start: 516325

End: 519312

Strand: Direct

Name: Not Available

Synonym: Sfri_0452

Alternate gene names: NA

Gene position: NA

Preceding gene: 114561635

Following gene: 114561643

Centisome position: NA

GC content: NA

Gene sequence:

>2988_bases
TTGTCATCAGAAAATTCAGTTAGCTTTATCCCTCATAGTTGGTTTGGGCATTTGTATCAGCGTGACGTAAATGCGATCAA
ATTGACGCAAGAGGGTATTACCTTTATACCTGGCCATGGCCAATTTTTAGCAAGATTTCGGCATAACAATAAGCAACTTA
TTATTGGGCAGTTATCATGGCAGCAATTAGATCACCCGCCACTGTTTAGTGCCAGTTTACTCGGTAACTTATTGAGTTTT
AATGCTGCAGGTACCCATTATCAAATTCCATTTTTAAGTTATTTTGCTAAATCTCATTTTAAGCAACAGGTCGAATTACT
CTGGGCTTTATCTCATCAAAAATCGCTGTGCGATTTGATATTACGAGTTGAAAAAGCCACATCGAGTCGGTATTTACGCC
AGTCATTAGTAGACAAAATGCGCGCTAGAATCGAACGTGAGTACTTTCGCTGGTTCCCTTGGAGTGAAGGGGCTGAGCTA
CCCGCTAATATACGTACCGCATTAACTCAATTACACGATTTTTATCACTGGAATAAAGCGGATATAGAGCGCTTACGTGA
AAGCTATATTCAATCACAGTTGCTTGCATTTGCGGGCTTTTTTGATCATGTTGAGTCAAATCCACTAACCAATAAACAGC
GTCGAGCATGTATTATCGATGATGATAGTAATCTGCTTCTCGCGGGCGCTGGAACGGGGAAAACCAGCGTAATGGTGGGC
AGAGCAGGTTATCTAGTGAATAGTGGTCAAGCTCAAGCTAATGACATTCTATTGCTTGCTTATGGCAAAAAAGCCGCCAT
GGAAATGGATCTGCGAATTAAACATAAGCTGGGCAGTGATGATATTAAGGCCAGTACTTTTCACAGTTTAGGCCTGAAAA
TTATTGCCGATGTTGAAGGCGTGAAACCTAGCTTATCAGCGTGGGTAAATGATGAACCCGCCAAAGACAAATGGGTGCAT
GATAGATTAGAAGTTTTGATTAAAAATGAATCTTATCGTAAACAACTTTTTGACTATTTTAGTCGTTATTATTACGTTGA
AAAAAGCCCATTCGAATTTTCAACACAAGGTGAGTATTTTGAATATTTAAATGATAACGACATTCGCTCATTGAAAGGTG
AAAGGGTCAAAAGTTTTGGTGAGTTGCATATCGCCAATTGGCTGTTTACCAATGGCATTGAATATCAATATGAAGCCAAG
TATGAATTTGATGTCAGCACGGTTGATTTTCGCCAGTATCAAGCTGATTTTTATCTACCTGAATATGAGGTTTATATTGA
ATATTATGGCATTGATGAAGCCAATAATACGGTTCCTTTTATCGATCAAGCTGCATATTTAACATCAATGGAATGGAAAC
GGCAGTTACATCATCAGCGCCAAACCAACTGCATCGAATTATTTTATTATCAGCACAAGAAAAGTCAGTTAATTAATAAG
CTTGAACAAGCTTTAACGGTATTTAAGGTTAACTATTCACCTTTACCTGATGAAGCGATATTGGCAACTCTTTATGAACT
GGGACGAGTCACTGAGCTGGCAAAATTGTTTAGCCAGCTCATTGGCTTGTACAAAGCCGCTTGTATTGACGAGGCCGGGC
TGGAAAAGGTATTTGCCAATGCTACCCAAACGCGTAAAGCATTTGAATTACTCCAACCCATTTTACAGCAGTATCAACAG
TATTTATCTGCTCACGGTGATATCGACTTTGAGGACATGATAGCCAAAGCGCTCGCATACCTGCAAAGTGGTCAATATGT
CAGCCCATGGCAATATATCATGGTCGATGAGTTTCAAGATATTTCAGAACCCAGAGCACGTTTAGTGCGAGCCTTGCGAG
ATTCGCGCACGAAAAAAGGTAACAGCGATACTTCATTATTTTGTGTTGGCGATGATTGGCAGGCTATTTATCGCTTTAGT
GGTGCGGATGTCCGTTTAACGACTCAATTTAAACGTTATTTTGGCCATGCCAGCGAAACGTATTTGGATCTTACTTTTAG
ATTTAATAACCGTATCGGTGAAGTGGCTAGCGCTTTTGTGAGTAAAAATCCGCATCAACTCAACAAAGATATCCATTCAT
TGGTACAAGTTGCCAAGCCTGCAGTATCAATACTTCGTCGTGGTACCAATGAGGGCGCAACTAAAGATGAGCCGAGTAAC
AACGCATTAGAGCAAGTCTTAAATGCTCTGTCCGTCCGCGTTACTCAAGCTGTTGATAAGCTTAAAGCTAAACCGACAGT
ATACTTACTGGCACGTTTCTGGTTTCAGTTGCCAGATAAAGACATGTTGCGTCAGTTAACGGCTAAATACCCGATGTTCG
TGATTGAGTGTTTATCGTTTCATGCTTCAAAAGGTAAAGAGGCCGATTATGTGGTGATCATGGGAATGACCCAAGGCATA
CATGGATTTCCGTCGAAAAAAATAACGCCACCTTTACTTGATGCGTTTTTACCTAAAGCTGAAAATTTTGAGTTTGCAGA
AGAACGACGTTTATTTTATGTCGCGCTAACCCGTGCAAAGCACCGAGTTTACGTTATCGCCGATATGACCAATGTGAGCC
CATTTATTGTGGAACTGATCCAACAAGATTATGCCGTTGAACAACAAGAATTTAGTACGTCTTTAGTGCAATCCTTGTTC
GAACAAATTAACTGTGTCCGATGTACAACTGGGATATTAAAACCACGAGTGGGCAAGTTCACATCATTCTTTTCTTGCTC
ACACTTTCCATTATGCGATCACAAAGAAGCAGGCTGTGACGAATGCGGCAGTCCGATGACACGCAAACGTTTTGTCGGTT
TCAAGGTATGCCTCAATGACAGTTGTGCCCATATGGCGCCGATATGTAACGTTTGTGGCAGTGAGATGAGCTTAAGAGAA
AGTGCTAGAGGGGCTTTTTGGGGCTGCAAAAATTATCGGGGTAACAACGTGCCTAGTTGTAGCAATACCATTAATACAGC
CAAAATATCTCCGCAACAGGTGCAGTAG

Upstream 100 bases:

>100_bases
GTATTATCAAGTTAAATCCATCATTGCTCATTATTTACTGTAACGTTATCTTAAATATGAGTCGGTTACCCCCTGAAACC
ATTTAGTCGTAGGTTTTACT

Downstream 100 bases:

>100_bases
TCATTAGACATGAATGACCGTTTCTACTCGTATTTAACACTTGCTGATAAGTGATGTGTTACTACGAGTGTAACTGATAA
AACAAAACGGGCTTATCATT

Product: UvrD/REP helicase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>995_residues
MSSENSVSFIPHSWFGHLYQRDVNAIKLTQEGITFIPGHGQFLARFRHNNKQLIIGQLSWQQLDHPPLFSASLLGNLLSF
NAAGTHYQIPFLSYFAKSHFKQQVELLWALSHQKSLCDLILRVEKATSSRYLRQSLVDKMRARIEREYFRWFPWSEGAEL
PANIRTALTQLHDFYHWNKADIERLRESYIQSQLLAFAGFFDHVESNPLTNKQRRACIIDDDSNLLLAGAGTGKTSVMVG
RAGYLVNSGQAQANDILLLAYGKKAAMEMDLRIKHKLGSDDIKASTFHSLGLKIIADVEGVKPSLSAWVNDEPAKDKWVH
DRLEVLIKNESYRKQLFDYFSRYYYVEKSPFEFSTQGEYFEYLNDNDIRSLKGERVKSFGELHIANWLFTNGIEYQYEAK
YEFDVSTVDFRQYQADFYLPEYEVYIEYYGIDEANNTVPFIDQAAYLTSMEWKRQLHHQRQTNCIELFYYQHKKSQLINK
LEQALTVFKVNYSPLPDEAILATLYELGRVTELAKLFSQLIGLYKAACIDEAGLEKVFANATQTRKAFELLQPILQQYQQ
YLSAHGDIDFEDMIAKALAYLQSGQYVSPWQYIMVDEFQDISEPRARLVRALRDSRTKKGNSDTSLFCVGDDWQAIYRFS
GADVRLTTQFKRYFGHASETYLDLTFRFNNRIGEVASAFVSKNPHQLNKDIHSLVQVAKPAVSILRRGTNEGATKDEPSN
NALEQVLNALSVRVTQAVDKLKAKPTVYLLARFWFQLPDKDMLRQLTAKYPMFVIECLSFHASKGKEADYVVIMGMTQGI
HGFPSKKITPPLLDAFLPKAENFEFAEERRLFYVALTRAKHRVYVIADMTNVSPFIVELIQQDYAVEQQEFSTSLVQSLF
EQINCVRCTTGILKPRVGKFTSFFSCSHFPLCDHKEAGCDECGSPMTRKRFVGFKVCLNDSCAHMAPICNVCGSEMSLRE
SARGAFWGCKNYRGNNVPSCSNTINTAKISPQQVQ

Sequences:
NA

Specific function: NA

COG id: COG0210

COG function: function code L; Superfamily I DNA and RNA helicases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA