Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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Identifier: 114561622

GI number:

Start: 481032

End: 483209

Strand: Reverse

Name: Not Available

Synonym: Sfri_0435

Alternate gene names: NA

Gene position: NA

Preceding gene: 114561623

Following gene: 114561621

Centisome position: NA

GC content: NA

Gene sequence:

>2178_bases
GTGCCTATAACTGCGTCTAACAAAAGTGAGCAGTGGACGATCTCTGCTTCCCAGCGGGTAACCGTCGATCCATTACTCGA
TTGTTTGGTTTTATTAACTGAACATTTTGGAAGTCCTTGCTCAATAGATTCTCTTGCGGCAGGTCTTCCTTTGTCTGGTG
CAGTCATTACGCCGGATTTAATCCCTCAAGCTGCAGCCAGAGCTGGACTTTCAGCTAAGTTATCACGCAAAGATTTAAAT
CAAATTTCTGACATATTATTGCCTTGTATCTTATTATTAAAAGATAAAAAGGCCTGTATTCTAAGAAAAATCGATCTAGA
GCAAGACCAAGCCGTTATACAATTACCTGAAACGGGCGGCGAAGAGACTCTGACAATTGAAGGCTTAGAAACCTTATATG
TAGGTTACTTATTTTTAGTTAAACAAGATTACCGTGGTGACAAAAGTTTTGATGTTCACCTGCATGACAGCAGTACGCAT
TGGCTGCTACAAAGTATTAAAGACTCTGCTCCTATTTACCGCGATGCACTTATAGCCTCAGTATTGGTCAACCTGTTTGC
ATTGGTTTCACCACTATTTATTATGAATGTCTATGATAAAGTGGTGCCCAATCTTGCATTTGAATCACTATGGGTTTTAG
CCATTGGGGCAAGCATTGCCTACATATTCGACTTTATCATGCGCCAATTACGCAGCTATTTAATCGATATCGCAGGTAAA
AAAGTCGACATTATTGTTTCTTCAAAATTATTTGCAAAAGCCATTGGTATTCCATTATCTAAACGCTCACCAAGTGTCGG
AGGTATGGCTAGGCAGCTAGGTGAGTTTGACAGTATTCGGGAGTTTTTAACCTCCGCAACCATTACTGCGTTAGTTGATT
TACCATTTGCATTACTATTCGTGATCATCATTTATATTGTTGCTGGCGATTTAGCCATTATTCCGGTGATTGGCAGCTTA
GTAATTATTGCAGTCACCTTTTATCTACAACCTAAACTGAAACAAGCAATTGAAGAAAGTAATCGCTTTGCCAGTTTAAA
GCATGGCCATTTGATTGAAAGTTTAACCGCGTTAGAGTCAATTAAAGCCAATGGTGCCGAAGGATTAGTACAAAAAAGCT
GGCAACAAATGATTGGCCATACAGCCAATTGGCAACTCAAAACCAAAAAACTGTCTAACTATGTCAGCCATATTGCTAAT
TTTATGGTGCAATTAACCGTTGTCCTAGTGGTGATATTAGGAGTGTATCGACTCGCTGAAAACGAAATATCCATGGGTGG
GATCATTGCTGCGGTAATGCTATCTAGCCGAGCGATATCTCCGATGGCTCAATTAGCAGGGTTAATTACTCGAGGTAATC
ATACCATCAGCTCACTGCGCCAATTAGACGCCATTATGGAACAAGAAGATGAGTTTGAAGACAAAGGAAATCTAGCCAGC
AAAGAACGATTTATGGGAAAAATTGAAGCTGACAATATCAGTTTTAGCTTCCCTAGCTCCGAAAAACCAAGTTTACACCC
TTTATCAATACAGATTAATCCCGGTGAGCGTATTGCCATTATCGGCCGTAATGGCTCAGGTAAAAGCACTCTAGCCAAAT
TACTACTCGGACTGTACAAACCGACTCAAGGTAGCCTGCGCTATGATGGCCTAGATGCAGGACAAATTCACCCAAGCGAT
CTTAGACGTAACTTTGGCTATTTACCTCAAGACGTCACCTTGTTTCACGGTACTATTCGCGACAATATTTTATTCGGTTC
TCGGCAAGTGACTGAACATCAGTTAATAAGAGCTATCCAGCTTTCTGGTGTCAGTATGTTTACTAACCTAGAGTCCGAAG
GCTTAGATCAACAAGTTGGTGAAGGAGGCTTGTCACTCAGTCGTGGCCAACGGCAAACCGTCGCCTTAGCCAGAGCAACA
TTGAATGATCCGTCGATATTATTAATGGATGAACCGACTGCCAGCTTAGATGCTAGAGCAGAAAAACAGTTTATTCGCTC
AATGCAACTGGTTAGTCGCGACAGAACATTATTACTCATTACCCATAAGATGCATTTATTAAATCTAGTCGATCGCATTA
TTGTGCTCGAACGTGGTCATATAGTGGCTGATGGTCCTAAAGATGAAGTCCTAGCTAAACTCAATGCAGGGACAATTGCT
GGAGCCCAAAACTCATGA

Upstream 100 bases:

>100_bases
GAAATATTATTCCTTAATAACAACACATTGACTGCGTCACATAGTATTATGTGGCGCATATTTGATTACTCTAACAATAG
ACATTAAGGATAATGATTAG

Downstream 100 bases:

>100_bases
GTAAGCATCTTACCGTAGCCGACTTAGAAATGGTTGATGACGTTTATGGTGCCATGATGACCGATGCCCCGTCAGGACAT
CGTCTTATCATTTGGTCACT

Product: ABC transporter related

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>725_residues
MPITASNKSEQWTISASQRVTVDPLLDCLVLLTEHFGSPCSIDSLAAGLPLSGAVITPDLIPQAAARAGLSAKLSRKDLN
QISDILLPCILLLKDKKACILRKIDLEQDQAVIQLPETGGEETLTIEGLETLYVGYLFLVKQDYRGDKSFDVHLHDSSTH
WLLQSIKDSAPIYRDALIASVLVNLFALVSPLFIMNVYDKVVPNLAFESLWVLAIGASIAYIFDFIMRQLRSYLIDIAGK
KVDIIVSSKLFAKAIGIPLSKRSPSVGGMARQLGEFDSIREFLTSATITALVDLPFALLFVIIIYIVAGDLAIIPVIGSL
VIIAVTFYLQPKLKQAIEESNRFASLKHGHLIESLTALESIKANGAEGLVQKSWQQMIGHTANWQLKTKKLSNYVSHIAN
FMVQLTVVLVVILGVYRLAENEISMGGIIAAVMLSSRAISPMAQLAGLITRGNHTISSLRQLDAIMEQEDEFEDKGNLAS
KERFMGKIEADNISFSFPSSEKPSLHPLSIQINPGERIAIIGRNGSGKSTLAKLLLGLYKPTQGSLRYDGLDAGQIHPSD
LRRNFGYLPQDVTLFHGTIRDNILFGSRQVTEHQLIRAIQLSGVSMFTNLESEGLDQQVGEGGLSLSRGQRQTVALARAT
LNDPSILLMDEPTASLDARAEKQFIRSMQLVSRDRTLLLITHKMHLLNLVDRIIVLERGHIVADGPKDEVLAKLNAGTIA
GAQNS

Sequences:
NA

Specific function: NA

COG id: COG2274

COG function: function code V; ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA