Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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Identifier: 114561454

GI number:

Start: 293402

End: 296545

Strand: Reverse

Name: Not Available

Synonym: Sfri_0266

Alternate gene names: NA

Gene position: NA

Preceding gene: 114561455

Following gene: 114561448

Centisome position: NA

GC content: NA

Gene sequence:

>3144_bases
ATGTTAGCAAAAATTATCAGTGCTTCAATAAAGCAACGCGTTATGGTGTTGATACTCACGGCCGTTATCGCGTTAGTGGG
TTATCAAGCCATGCGCATGACCCCACTGGACGCACTACCTGATTTATCAGACGTACAAGTTATTGTAAAAACCTCTTACC
CAGGCCAGGCACCACAATTAGTTGAAGATCAAATTACCTATCCATTGTCATCGGCCATGCTTGCCGTGCCAGGAGCCAAA
ACAGTACGTGGTTTTTCAATGTTTGGTGACTCGTTTGTGTATGTCATTTTTGAAGATGGCACCGATATCTATTGGGCGCG
TTCACGGGTGCTTGAATATTTATCGCAAACCCAAGATCAACTGCCTGACGGTGTCACGCCCAGTATTGGCCCTGATGCAT
CGGGAGTGGGTTGGATTTTCCAATATGCCTTAGTCGATCGTAACGGACAGTATGATTTAGCCCAACTGCGTTCATTACAA
GATTGGTTTTTAAAACTTGAATTACAAAGTGTTGCCGGAGTATCCGAAGTTGCGACTGTTGGCGGTATGGAACAAACATA
TCAAGTGGTCGTCGACCCACATAAGCTAGCACTGTATAAAATCGACTTAATGACCATTAAAAACGCCTTAGATAACTCCA
ATAGCTCGACAGGCGGCTCGGTGATTGAAATGGCCGAAGCAGAATACATGATCACTTCAAGTGGTTATCGCCAAACCATT
GCCGACTTTGCTGAAGTCCCACTGGGCATTTTATCGGAAACTGGTACGCCGGTATTAATGAAAGACGTTGCCCAACTACG
AACTGGCCCAGCGGCGCGTCGTGGTATTGCCGAACTCGATGGCAAAGGCGAAGTTGTCGGCGGTATTGTGGTGATGCGCT
ATGGTGAAAATGCTCTTGAAACCATTAATAATGTTAAGCAAAAACTCAAGGAGATCAGTAATGGATTACCTGATGGGGTC
GAATTAGTCACCACTTATGATCGCTCAGAGTTAATCTTACGCTCAGTCGATAACCTTAAGCATAAAGTGTTAGAAGAAAT
GCTGGTTGTCGGACTTATTTGCCTACTATTTTTACTGCATGCACGCTCAACGTTAGTCGCGATAATCACCTTACCTATTT
CGATTTTAGTCAGCTTTATCGCCATGAATATCATTGGTGTCAATGCCAATATTATGAGCTTAGGCGGTATTGCCATTGCC
ATAGGAGCGGTAGTTGATGCGTCAATTGTAATGGTCGAAAATACCCATAAGCATTTGGAACATTATCGCCAAAAACACGG
TAAAGCTCCAGAAGGAGATGATCATTGGCAACTCGTCAAAGAGGCCTCAATTGAGGTCGGCCCAGCTTTATTTTTCAGCT
TATTGATTATAACCCTAAGCTTTACACCGGTCTTTGCCCTTGAAGCGCAAGAAGGACGTTTATTTCACCCGCTAGCCTTT
ACCAAAACCTTCGCTATGGCGGCATCTGCCATTTTAGCAATTACCTTAATTCCGGTGTTAATGGGTTATTTTGTGCGAGG
TAAAATCCCTGATGAGCGTAAAAACCCCATTAGCCGAGTATTAATTGCCATATATCAACCATTGTTAAAATGGGTACTGC
ATTTCCCTAAAATCACCATCGGATTAGCCATTATTGTGCTATTCAGTGCTTACTACCCATTAAGCCAAATGGGCTCAGAG
TTTATGCCCACCTTAGAAGAAGGTGACCTACTTTACATGCCCACCACGCTACCCAGTGTAAGTGCAGGCAAAGCAGCAGA
AATATTGCAGCAAACTGACCGACTGATAAAAACAGTACCCGAAGTTAAACGCGTGTTTGGCAAAGTGGGCCGAGCCATGA
CAGCAACTGACCCAGCGCCGCTAACAATGCTAGAAACCACCATCATGCTCAAACCGCCTGGCGAATGGCGTGAAGGCGTA
ACCTTAGAGAGCATTATTGCTGAACTGCAAAAAACCGTGCGTATACCAGGGATGACCAATGCTTGGGTGCAACCGATTAA
AACCCGTATCGATATGTTATCTACCGGCGTGAGAACGCCTGTCGGCATAAAAATATCGGGCGCAAATGTTGAAGAACTAC
AACGTATTGGTGCAGAAATAGAAGCGGTAGTAAACCAATTACCGGGAACTGAGTCGGCATTTTCACAGCGTAGTAGCGGC
GGCCGTTATATCGATATCACACCAGACCTTAAAAATGCCGCACGTTATGGCATGACCTTAAAAGACATCCAAGATGTGGT
AAAGATTGCCATTGGTGGCATGACAATAGGTGAATCAATACAAGGTCAAGAACGCTATCCAATCAATATCCGTTACCCGC
GAGAGCTACGTGACAACATCGAGAAGCTCAGAAATTTACCCGTTCTGACTAAAACGGGTAAGTACTTACCGTTAAGTTAT
TTAGCCGAACTGAAAATTACCGATGGTGCGCCTATGTTAGCCAGTGAAAACGGTCGCCTTATCTCGTGGGTGTTTGTCGA
TCTGAAAGACATTTCTATCGGTGAATATATCGTTGCAGCAGAAAAGGCACTTAAACAACAAATTACCCTTCCTCCACGCT
ACAACTATAGCTTTGCTGGGCAATACGAGTACATGCAACGCGTAGATGCCAAAATGAAAATGGTGATCCCATTAATGATC
GCGGTGATTTTTATGTTGCTGATGATGACTTTCAACTCAGTAATACAAGCATCTGTAATCATGTTAAGTTTACCCTTTTC
ATTGGTGGGTAGCGCATGGCTACTGTATGGACTCGATTTTAATTTTTCAGTTGCTGTATCTGTCGGCATGATTGCCTTAG
CTGGGGTCGCCGCTGAGTTTGGCGTAGTGATGCAGGTGTACCTTAATAATAGTATTAAGGCCTATAAAGAAGCCGACAAT
TACCACAGCAAAGCGGATTTAACGGCTGCATTAATTGAAGGTGCAGTGATGCGCATTCGCCCTAAAGCCATGACCGTCGC
CACCATCTTTTTTGGTTTACTACCGATCATGTGGGGTAGCGGTACGGGTAATGAAGTGATGCAAAAAATTGCTGCGCCTA
TGGTCGGAGGAATGGTCACTGCGCCGCTACTGTCGCTATTTGTTATCCCAGCAATTTACTTGCTGATATATGGCCGTAAG
TTACCCAAGCAATCATTATCTTAA

Upstream 100 bases:

>100_bases
CAGAAGCCAGTATTCAAGGCAGTTTACAGCGTTTAAGTAATGCGCCAACGACCAAAGAATCAACCACTACCGATGCTCAC
CAGCACTAAGGAGCACGACA

Downstream 100 bases:

>100_bases
ATTTATTTAACCAGAGTTGAGGTTATTACTTTTACCCCTATAAATAAAAATCCCAAACGATTAATCGCTTGGGATTTTTA
TATGCTAATTACAATGTTAT

Product: heavy metal efflux pump, CzcA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1047_residues
MLAKIISASIKQRVMVLILTAVIALVGYQAMRMTPLDALPDLSDVQVIVKTSYPGQAPQLVEDQITYPLSSAMLAVPGAK
TVRGFSMFGDSFVYVIFEDGTDIYWARSRVLEYLSQTQDQLPDGVTPSIGPDASGVGWIFQYALVDRNGQYDLAQLRSLQ
DWFLKLELQSVAGVSEVATVGGMEQTYQVVVDPHKLALYKIDLMTIKNALDNSNSSTGGSVIEMAEAEYMITSSGYRQTI
ADFAEVPLGILSETGTPVLMKDVAQLRTGPAARRGIAELDGKGEVVGGIVVMRYGENALETINNVKQKLKEISNGLPDGV
ELVTTYDRSELILRSVDNLKHKVLEEMLVVGLICLLFLLHARSTLVAIITLPISILVSFIAMNIIGVNANIMSLGGIAIA
IGAVVDASIVMVENTHKHLEHYRQKHGKAPEGDDHWQLVKEASIEVGPALFFSLLIITLSFTPVFALEAQEGRLFHPLAF
TKTFAMAASAILAITLIPVLMGYFVRGKIPDERKNPISRVLIAIYQPLLKWVLHFPKITIGLAIIVLFSAYYPLSQMGSE
FMPTLEEGDLLYMPTTLPSVSAGKAAEILQQTDRLIKTVPEVKRVFGKVGRAMTATDPAPLTMLETTIMLKPPGEWREGV
TLESIIAELQKTVRIPGMTNAWVQPIKTRIDMLSTGVRTPVGIKISGANVEELQRIGAEIEAVVNQLPGTESAFSQRSSG
GRYIDITPDLKNAARYGMTLKDIQDVVKIAIGGMTIGESIQGQERYPINIRYPRELRDNIEKLRNLPVLTKTGKYLPLSY
LAELKITDGAPMLASENGRLISWVFVDLKDISIGEYIVAAEKALKQQITLPPRYNYSFAGQYEYMQRVDAKMKMVIPLMI
AVIFMLLMMTFNSVIQASVIMLSLPFSLVGSAWLLYGLDFNFSVAVSVGMIALAGVAAEFGVVMQVYLNNSIKAYKEADN
YHSKADLTAALIEGAVMRIRPKAMTVATIFFGLLPIMWGSGTGNEVMQKIAAPMVGGMVTAPLLSLFVIPAIYLLIYGRK
LPKQSLS

Sequences:
NA

Specific function: NA

COG id: COG3696

COG function: function code P; Putative silver efflux pump

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA