Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 114561400

GI number:

Start: 233551

End: 235791

Strand: Direct

Name: Not Available

Synonym: Sfri_0212

Alternate gene names: NA

Gene position: NA

Preceding gene: 114561399

Following gene: 114561401

Centisome position: NA

GC content: NA

Gene sequence:

>2241_bases
ATGAATACCCAAACAACAACACAATTATTGATAGAGGGTGCAGGTTGTGCCAGCTGTGTTGGCAAAATTGAGAAAGCCCT
TAAAACAGTCGCGCAAGTAGAGCAGGCTGAAATGAACTTTGCTGATCGCAGTGTGATGGTCACCGGAGAGGTTGACGTTG
CTCGTTTACTTGATGCTGTTGAGCAAGCCGGTTACCACGCAATTGTGATTAACGATCAAGGTGGTGCAGATGCCATTGAT
GAGAAAGAACAGGCCGATGCTGCCTACTATAAAAGCTTAATCAAACACACAGTCGTTGCATTAGCAGTGGGTATTCCACT
GATGATCTATGGTTTATTGATTGGTGACATGACCGTTACCAGCCCAATGCAACAGCTGGTTTGGGGCGCAATTGGTGTGC
TCACCTTAGGGATAATGTTTGTCTCGGGTAAGCATTTTTATACTGGCGCTTGGAAGTCATTTATTAATCATAGCGCCAAT
ATGGATACCTTAATCGCCTTAGGTACCGGAACCGCCTGGGTTTATTCTATGGTCGTGGTGCTTGCGCCAGATTTATTGCC
ACAAATGGCGCGCCATGTTTATTTTGAAGCAACCGCGATGATCATTGGTTTAATCAACCTTGGACTTGCGTTAGAGGTTA
AAGCGCGCGGTAAAACCTCGGCAGCCATTAAACGTCTTATTGGGTTACAAGCTAAAACGGCTAGGGTGATCCGCAATGGT
AAAGCGGTCGATATCGATATTGCTCTGGTGCAATTAAACGATAAAGTCAGTGTTCGTCCAGGTGAAAAAATTCCTGTTGA
TGGTGTGGTCGTTGAAGGCAGCAGCTTTATTGATGAGTCGATGCTGACGGGTGAACCTATTCCGGTTGAAAAAGGCATTA
ACGATGACGTAGTCGCGGGCACATTAAATAAGCTAGGTTCACTTACCTTCACCACTACCCGAGTCGGTAAAGATACCGCC
TTGGCGCATATTATTACTATGGTTAAGCGGGCACAAAATTCCAAACCGCCCATTGGCCGTATGGCAGATGTGATTTCGGG
CTATTTTGTTCCCGCTATGATGATTATTGCCATTATTAGCGCCATGGTATGGCTCAATTTTGGTCCAGAACCGTCAATGG
GATACGCCATCGTGTCGGCGATGACAATTTTAATCATCGCTTGTCCGTGTGCGTTAGGGTTAGCAACACCCATGTCGGTG
ATGGTGGGCGTAGGTAAAGCCGCTGAATCTGGCGTGCTTATTCGTAATGGTGAAGCCCTGCAAACGGCATCGACCATTAC
CACCATGATTTTAGATAAAACCGGCACGATTACCGAAGGCGCGCCAAAAATCACCGATATCATAGTGGTCAATGGTCGCG
AACAAGAGCACGTATTGCAACTGGCGGCAAGTATTGAGCAACATTCTGAGCATCCACTTGCACAGGCCGTAGTTCAAGCC
GCTGCGGATAAGGGATTAGCGTTATTCAATGTTGAACAGTTTACTGCAATAGCTGGTTTTGGGGTTCAAGCCCAATATCA
ATCAACACAGTTGTTATTTGGTAATGAAAAACTAATGCGCGAAAAAGGCATTGCCTTAAGCGATTATCAACAACAAGCAC
AAGCATTAGCAGCAGAAGCCAAAACGCCAATGTATTTTGCTATCGACGGTGAACTCGCAGCAGTGATTGCAGTGGCTGAC
CCGATTAAAGCAGACTCTGTTGCCGCCATCGCAAGGCTTAAAAATAGTGGCATTAAGGTCATTATGCTTACCGGCGATAA
CCATGCAACAGCCGCAGCAGTGGCGGCCAAAGTGGGCGTTGATGACTTTTTTGCCGATGTATTACCACAAGATAAAGCCA
ATAAAGTGGCCGAATTACAAGCCTTAGGTGAGGTTGTGGGTATGACCGGCGATGGCATTAATGATGCTCCAGCGTTGGCT
CTGGCTAATGTCGGCTTTGCCATAGGCACCGGAACAGACGTGGCGATTGAAAGTGCCGATATAACGCTAATGCGAGGATC
GCTACACGGTTTGGCAGATGCCATCGCGGTGAGTAAAGCGACGTTAGGCAACATTAGGCAAAATCTGGTTGGTGCGTTTA
TTTACAATATGGCGGGTATTCCGCTCGCTGCAGGGGTGTTATTTCCGGTATTTGGCGTATTGCTTAACCCAGTAGTTGCC
GGTGCTGCAATGGCATTTTCATCATTAACCGTGGTGACCAATGCCAACCGTTTACGCTTTTTTACCCCTCAACAACACTA
G

Upstream 100 bases:

>100_bases
CAGCGTTGGCGCCTACAGGTGCCATGATTTGTCACTTGATTGAGGGATTTGATCCAAACCATGAAACCCCTTGTCAGGCT
AGTGATAAGGAGTCTTTGTG

Downstream 100 bases:

>100_bases
GAGTGAATGATGCTATTAATTAACTTATTTTGTGTGGCATTGATTGCCCTTATCGTTTGGTGGTTTTGGTTATATAAACC
CAAAGCCACCACTCATCAAG

Product: copper-translocating P-type ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>746_residues
MNTQTTTQLLIEGAGCASCVGKIEKALKTVAQVEQAEMNFADRSVMVTGEVDVARLLDAVEQAGYHAIVINDQGGADAID
EKEQADAAYYKSLIKHTVVALAVGIPLMIYGLLIGDMTVTSPMQQLVWGAIGVLTLGIMFVSGKHFYTGAWKSFINHSAN
MDTLIALGTGTAWVYSMVVVLAPDLLPQMARHVYFEATAMIIGLINLGLALEVKARGKTSAAIKRLIGLQAKTARVIRNG
KAVDIDIALVQLNDKVSVRPGEKIPVDGVVVEGSSFIDESMLTGEPIPVEKGINDDVVAGTLNKLGSLTFTTTRVGKDTA
LAHIITMVKRAQNSKPPIGRMADVISGYFVPAMMIIAIISAMVWLNFGPEPSMGYAIVSAMTILIIACPCALGLATPMSV
MVGVGKAAESGVLIRNGEALQTASTITTMILDKTGTITEGAPKITDIIVVNGREQEHVLQLAASIEQHSEHPLAQAVVQA
AADKGLALFNVEQFTAIAGFGVQAQYQSTQLLFGNEKLMREKGIALSDYQQQAQALAAEAKTPMYFAIDGELAAVIAVAD
PIKADSVAAIARLKNSGIKVIMLTGDNHATAAAVAAKVGVDDFFADVLPQDKANKVAELQALGEVVGMTGDGINDAPALA
LANVGFAIGTGTDVAIESADITLMRGSLHGLADAIAVSKATLGNIRQNLVGAFIYNMAGIPLAAGVLFPVFGVLLNPVVA
GAAMAFSSLTVVTNANRLRFFTPQQH

Sequences:
NA

Specific function: NA

COG id: COG2217

COG function: function code P; Cation transport ATPase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA