Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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Identifier: 114561361

GI number:

Start: 182753

End: 183742

Strand: Direct

Name: Not Available

Synonym: Sfri_0173

Alternate gene names: NA

Gene position: NA

Preceding gene: 114561360

Following gene: 114561362

Centisome position: NA

GC content: NA

Gene sequence:

>990_bases
ATGCAGGGTTCTGTTACAGAATTTCTTAAACCGCGTCTCGTTGATATTGAGCAGGTTAATTCAACTCGCGCCAAAGTTAC
ACTAGAGCCACTAGAACGTGGTTTTGGCCATACCTTAGGTAACGCGTTGCGTCGCATCCTATTGTCGTCTATGCCTGGCT
GTGCAGTTACTGAAGTCGAAATTGACGGCGTACTGCATGAATACAGCAGTAAGGAAGGCGTACAAGAAGATATCCTTGAG
ATATTGCTTAATCTTAAGGGATTAGCAGTGACCATCGAGGGTAAAGACGAGGCTTTGCTTACATTAAGCAAGTCCGGCAC
AGGCCCTGTTACAGCAGCAGATATCACGCATGATGGTGATGTTACCATCGTGAATCCTGATCATGTTATCTGTCACTTGA
CTGGTAACAATGATATCAGCATGCGTATCCGCGTTGAGCGTGGTCGTGGTTATGTGCCAGCTTCGGCTCGTGCACAGACT
GAAGACGATGATCGCCCAATCGGTCGTTTGCTGGTTGATGCTTCTTTTTCACCTGTTGCTCGCATTGCTTATAATGTTGA
AGCAGCTCGTGTTGAACAGCGTACTGACTTAGACAAACTTGTGATAGATATGACCACAAACGGTACTATCGATCCTGAGG
AAGCAATTCGTCGTTCTGCAACTATTTTAGCTGAACAGCTAGATGCGTTTGTTGAACTACGTGATGTTACTGAGCAGGCT
GTTGTAGAAGAGAAACCGGAGTTCGATCCGATTTTGCTGCGTCCTGTCGACGATTTAGAGCTAACTGTACGTTCGGCTAA
CTGTTTAAAAGCCGAAGCGATTCATTACATCGGAGATCTGGTACAACGCACTGAAGTTGAGTTGCTTAAGACCCCTAACT
TAGGTAAGAAATCTCTTACTGAAATTAAGGATGTTTTAGCGTCTCGCGGACTGTCGTTAGGTATGCGTCTAGAAAACTGG
CCACCGGCTAGTTTAGCTGACGACCTATAA

Upstream 100 bases:

>100_bases
CAAGCGCGTTCCAGAACGTAGCGATTTGTCTGCGGATATTAACGAACAGCTGATCGTCGAGCTTTACTCTAAGTAAAGCT
AACAAACAAGAGAGGACACA

Downstream 100 bases:

>100_bases
GTCTCAGGTTAGTACAGATTTAGGTTATAAGGATTAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTAAACCGCAACA
GCAGTCATCGCCAAGCTATG

Product: DNA-directed RNA polymerase subunit alpha

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>329_residues
MQGSVTEFLKPRLVDIEQVNSTRAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVEIDGVLHEYSSKEGVQEDILE
ILLNLKGLAVTIEGKDEALLTLSKSGTGPVTAADITHDGDVTIVNPDHVICHLTGNNDISMRIRVERGRGYVPASARAQT
EDDDRPIGRLLVDASFSPVARIAYNVEAARVEQRTDLDKLVIDMTTNGTIDPEEAIRRSATILAEQLDAFVELRDVTEQA
VVEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSLTEIKDVLASRGLSLGMRLENW
PPASLADDL

Sequences:
NA

Specific function: NA

COG id: COG0202

COG function: function code K; DNA-directed RNA polymerase, alpha subunit/40 kD subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA