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The map label for this gene is ycbK [H]

Identifier: 114332478

GI number: 114332478

Start: 2658373

End: 2658957

Strand: Reverse

Name: ycbK [H]

Synonym: Neut_2531

Alternate gene names: 114332478

Gene position: 2658957-2658373 (Counterclockwise)

Preceding gene: 114332479

Following gene: 114332476

Centisome position: 99.92

GC content: 48.55

Gene sequence:

>585_bases
ATGTCCAAACTTATCATTGCAGACAATCTGGAAACACTTACCGCACATGGCAACAGTCGGCGGCGACTGTTGCAAGCCAG
TTTAGGCGCATGTGCACTATTTGCCATGCCGGCAGCCAATGCTGCCAATTCCCCCCGTATTTATGAAAAACGCCTGTCCT
TGTTAAATCTGCATACCGGAGAAAGAATCAGGACAGCTTACTGGGAGCAGGGAAAATATATTCCGGAAGCATTGCAGGCG
ATAGCTAAAGTATTGCGCGACCATCGTTCCGGTGAACGTCACCCGATTGATCCAGGATTGCTTGATCTGATCCAGCATCT
GCACCATAAAACAGGCAGCTCAAAAGAATTTCAGGTAATTTCTGGGTATCGATCGCCGGCTACCAATGCTACCCTCGCAG
CGAAAAGCCACGGTGTAGCTAAAAAAAGCCTGCATATGCAAGGTAAGGCAATAGATATTCGTTTGCCCGGTGTTCCACTT
AATGCGTTGCGACGTGCGGCCATGTCGATGCGTGTTGGAGGCGTTGGCTACTACCCGGAATCAAATTTTATCCATGTTGA
TACCGGTAACGTTCGCTATTGGTAA

Upstream 100 bases:

>100_bases
TACGGGCGTGACAAACGGGCGCTGGCATACGCCCACTGGTAACAGCCGGAAAAGTGTCTATGACAGTCTTTTTAATTTGG
CACGATCATGGAGGATAACA

Downstream 100 bases:

>100_bases
CTAGAAAACTTCTGATTGATCAAAAACTCCTGTAGGTACATTCTTCCCGGCCAGTTTCCTGACCAGGTGTTCACATAAAC
CTGCTTACAATACATTAATC

Product: twin-arginine translocation pathway signal

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MSKLIIADNLETLTAHGNSRRRLLQASLGACALFAMPAANAANSPRIYEKRLSLLNLHTGERIRTAYWEQGKYIPEALQA
IAKVLRDHRSGERHPIDPGLLDLIQHLHHKTGSSKEFQVISGYRSPATNATLAAKSHGVAKKSLHMQGKAIDIRLPGVPL
NALRRAAMSMRVGGVGYYPESNFIHVDTGNVRYW

Sequences:

>Translated_194_residues
MSKLIIADNLETLTAHGNSRRRLLQASLGACALFAMPAANAANSPRIYEKRLSLLNLHTGERIRTAYWEQGKYIPEALQA
IAKVLRDHRSGERHPIDPGLLDLIQHLHHKTGSSKEFQVISGYRSPATNATLAAKSHGVAKKSLHMQGKAIDIRLPGVPL
NALRRAAMSMRVGGVGYYPESNFIHVDTGNVRYW
>Mature_193_residues
SKLIIADNLETLTAHGNSRRRLLQASLGACALFAMPAANAANSPRIYEKRLSLLNLHTGERIRTAYWEQGKYIPEALQAI
AKVLRDHRSGERHPIDPGLLDLIQHLHHKTGSSKEFQVISGYRSPATNATLAAKSHGVAKKSLHMQGKAIDIRLPGVPLN
ALRRAAMSMRVGGVGYYPESNFIHVDTGNVRYW

Specific function: Unknown

COG id: COG3108

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1666 [H]

Homologues:

Organism=Escherichia coli, GI1787157, Length=180, Percent_Identity=46.6666666666667, Blast_Score=155, Evalue=1e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010275
- InterPro:   IPR009045
- InterPro:   IPR006311 [H]

Pfam domain/function: PF05951 Peptidase_M15_2 [H]

EC number: NA

Molecular weight: Translated: 21438; Mature: 21307

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLIIADNLETLTAHGNSRRRLLQASLGACALFAMPAANAANSPRIYEKRLSLLNLHTG
CCCEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCC
ERIRTAYWEQGKYIPEALQAIAKVLRDHRSGERHPIDPGLLDLIQHLHHKTGSSKEFQVI
CHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEE
SGYRSPATNATLAAKSHGVAKKSLHMQGKAIDIRLPGVPLNALRRAAMSMRVGGVGYYPE
ECCCCCCCCCEEECCCCCCHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEECCC
SNFIHVDTGNVRYW
CCEEEEECCCEECC
>Mature Secondary Structure 
SKLIIADNLETLTAHGNSRRRLLQASLGACALFAMPAANAANSPRIYEKRLSLLNLHTG
CCEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCC
ERIRTAYWEQGKYIPEALQAIAKVLRDHRSGERHPIDPGLLDLIQHLHHKTGSSKEFQVI
CHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEE
SGYRSPATNATLAAKSHGVAKKSLHMQGKAIDIRLPGVPLNALRRAAMSMRVGGVGYYPE
ECCCCCCCCCEEECCCCCCHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEECCC
SNFIHVDTGNVRYW
CCEEEEECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]