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The map label for this gene is fccB [H]

Identifier: 114332473

GI number: 114332473

Start: 2654176

End: 2655858

Strand: Reverse

Name: fccB [H]

Synonym: Neut_2526

Alternate gene names: 114332473

Gene position: 2655858-2654176 (Counterclockwise)

Preceding gene: 114332474

Following gene: 114332472

Centisome position: 99.8

GC content: 49.73

Gene sequence:

>1683_bases
ATGAGTGTCACCCCTGAAACAAAATGGAAAGAACTGGATAAAAAAATAGCAGTCACTGGCCAGATTAGCGTGGATGATAT
CGCTGGCATTGCGGCTGCGGGCTACAAGTCGATTATTTGTAATCGCCCCGATGGAGAAGGCGGAGAAAGTCAGCCAGCTC
GCACTGCACTGGAGAACGCAGCGAAGGCGGCTGGGTTGCAGTTTGCTTATATGCCGGTTGAAGTTGGCCAGGTTTCAGAT
GAAAAATGTTCTGCTTTTCACCAACTGATGCAAACACTGCCTGGCCCGGTACTGGCTTTTTGCGGCTCGGGTAATCGTGC
CCAGGCATTGTACACTCGCAATACCGGCGCTTCTACAGCATCTGCCAGTACTGGCACACAAGAAAAAGTGGAGGATGTAG
CCGAAACTTATTGTGAACCGGCAGATAAACGTCAGACCGAAACAGTCGCAGCTTGCAACTGGGATGATGTTTTTGACATT
GTGGTGGTAGGCGGCGGATCAGCTGGTCTAGGAGTAACTGCAAGCCTGCTGCGTCGGCGTTCATCTCTACGTATTGCCGT
TATTGAACCAAGCGAGAAACATTATTATCAACCTGCCTGGACGTTGGTCGGTGGCGGCGCGTATGCTATTGATCAGACCG
CTCGCAATACAGCTGATGTCATGCCGCATGGCGCAGAGTGGATCAAGGTAGCAGCATCCAAATTTGCGCCTGAAAAAAAT
CTGGTTCATCTGGCAGATGGTCGTTCCGTCGGCTACCGTCAATTGATCGTATGTCCAGGTATTCGTCTGGCCTGGGAAAA
AATAGAAGGTGCCCAGGAAACACTTGGCAAAAACGGCGTCACCTCTAACTACCTGTTCGATCTCGCACCATATACCTGGT
CACTGGTACAACAGCTTAAAGGTGGTAAGGCGCTGTTTACACAACCGCCAATGCCGATCAAATGTGCTGGAGCTCCACAG
AAAGCGATGTATTTATCTTGTGATTATTGGCAGCGCCATGGCGTTCTGGACAAAATCGATGTCGAATTTGATCTGGCAGG
AGCAGTTTTGTTTGGGGTTCCCGAGTTTGTGCCGCCTTTGATGGAGTATGTTCATAAATATCATGCCGGGCTGGTGTTCA
ATTCCAATCTGGTCAAGGTCAATGGCCCGGAAAAAATTGCTACCTTTGAAATCAAGAATGAGGCAGGCGAAGTTACCCGT
GTCGATAAGCCGTTCGATATGCTGCACATCACGCCACCCCAGGTCGCGCCGGATTTCTTGAGCAACAGTCCACTGGCAAA
TGCTGCCGGATTCTGTGAGGTTGATCCCAAAACACTGCGAAGCACTTGCTTCTCCAATGTTTTCTCACTGGGTGATGCCT
GTTCTGCTCCTAACTCTAAAACAGCAGCCGCGGTTAGAAAACAGGTGGTCATCGTTGCTGAAAATCTGCTGGCAGCAAAA
GAAGGACGTGAACTTCGCGCGGTTTACGATGGTTACGGCGCTTGCCCGTTGACCGTCGAAAATGGCAAAGTGGTTCTGGC
AGAATTTGGTTATGGCGGAAAATTGCTGCCAACTTTTCCGCTTAACCCGGTTATTGCCAGAAAGTTATACTGGTGGATGA
AAGTTAATCTTTTCCCATGGGTATACTGGGATTGTCTGCTGAAAGGACGTGAGTGGCTGGCTGGATCCACTGAATCCAAA
TAG

Upstream 100 bases:

>100_bases
TTCAACTCTGGAGCAGTCTCTGGAGCAGTTACACTACATACCGATACGAAGCCGCTATCAAATCGACAGTAATAAAAAAC
AAAAGTAAGGAGAAATCATT

Downstream 100 bases:

>100_bases
ATTCTGTATGGAAGTTCACTGGCTGGGTATTTTGCCGGGTATTTTTACGGGGTTTGTACTTGGGCTAACCGGCTCCGGTG
GCACCATTATTGCCGTTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: FCSD; Flavocytochrome c flavoprotein subunit; FC [H]

Number of amino acids: Translated: 560; Mature: 559

Protein sequence:

>560_residues
MSVTPETKWKELDKKIAVTGQISVDDIAGIAAAGYKSIICNRPDGEGGESQPARTALENAAKAAGLQFAYMPVEVGQVSD
EKCSAFHQLMQTLPGPVLAFCGSGNRAQALYTRNTGASTASASTGTQEKVEDVAETYCEPADKRQTETVAACNWDDVFDI
VVVGGGSAGLGVTASLLRRRSSLRIAVIEPSEKHYYQPAWTLVGGGAYAIDQTARNTADVMPHGAEWIKVAASKFAPEKN
LVHLADGRSVGYRQLIVCPGIRLAWEKIEGAQETLGKNGVTSNYLFDLAPYTWSLVQQLKGGKALFTQPPMPIKCAGAPQ
KAMYLSCDYWQRHGVLDKIDVEFDLAGAVLFGVPEFVPPLMEYVHKYHAGLVFNSNLVKVNGPEKIATFEIKNEAGEVTR
VDKPFDMLHITPPQVAPDFLSNSPLANAAGFCEVDPKTLRSTCFSNVFSLGDACSAPNSKTAAAVRKQVVIVAENLLAAK
EGRELRAVYDGYGACPLTVENGKVVLAEFGYGGKLLPTFPLNPVIARKLYWWMKVNLFPWVYWDCLLKGREWLAGSTESK

Sequences:

>Translated_560_residues
MSVTPETKWKELDKKIAVTGQISVDDIAGIAAAGYKSIICNRPDGEGGESQPARTALENAAKAAGLQFAYMPVEVGQVSD
EKCSAFHQLMQTLPGPVLAFCGSGNRAQALYTRNTGASTASASTGTQEKVEDVAETYCEPADKRQTETVAACNWDDVFDI
VVVGGGSAGLGVTASLLRRRSSLRIAVIEPSEKHYYQPAWTLVGGGAYAIDQTARNTADVMPHGAEWIKVAASKFAPEKN
LVHLADGRSVGYRQLIVCPGIRLAWEKIEGAQETLGKNGVTSNYLFDLAPYTWSLVQQLKGGKALFTQPPMPIKCAGAPQ
KAMYLSCDYWQRHGVLDKIDVEFDLAGAVLFGVPEFVPPLMEYVHKYHAGLVFNSNLVKVNGPEKIATFEIKNEAGEVTR
VDKPFDMLHITPPQVAPDFLSNSPLANAAGFCEVDPKTLRSTCFSNVFSLGDACSAPNSKTAAAVRKQVVIVAENLLAAK
EGRELRAVYDGYGACPLTVENGKVVLAEFGYGGKLLPTFPLNPVIARKLYWWMKVNLFPWVYWDCLLKGREWLAGSTESK
>Mature_559_residues
SVTPETKWKELDKKIAVTGQISVDDIAGIAAAGYKSIICNRPDGEGGESQPARTALENAAKAAGLQFAYMPVEVGQVSDE
KCSAFHQLMQTLPGPVLAFCGSGNRAQALYTRNTGASTASASTGTQEKVEDVAETYCEPADKRQTETVAACNWDDVFDIV
VVGGGSAGLGVTASLLRRRSSLRIAVIEPSEKHYYQPAWTLVGGGAYAIDQTARNTADVMPHGAEWIKVAASKFAPEKNL
VHLADGRSVGYRQLIVCPGIRLAWEKIEGAQETLGKNGVTSNYLFDLAPYTWSLVQQLKGGKALFTQPPMPIKCAGAPQK
AMYLSCDYWQRHGVLDKIDVEFDLAGAVLFGVPEFVPPLMEYVHKYHAGLVFNSNLVKVNGPEKIATFEIKNEAGEVTRV
DKPFDMLHITPPQVAPDFLSNSPLANAAGFCEVDPKTLRSTCFSNVFSLGDACSAPNSKTAAAVRKQVVIVAENLLAAKE
GRELRAVYDGYGACPLTVENGKVVLAEFGYGGKLLPTFPLNPVIARKLYWWMKVNLFPWVYWDCLLKGREWLAGSTESK

Specific function: Unknown

COG id: COG0446

COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI10864011, Length=405, Percent_Identity=38.5185185185185, Blast_Score=304, Evalue=1e-82,
Organism=Caenorhabditis elegans, GI17539680, Length=420, Percent_Identity=33.5714285714286, Blast_Score=232, Evalue=4e-61,
Organism=Caenorhabditis elegans, GI115534373, Length=353, Percent_Identity=35.9773371104816, Blast_Score=217, Evalue=2e-56,
Organism=Drosophila melanogaster, GI24657386, Length=382, Percent_Identity=37.696335078534, Blast_Score=272, Evalue=4e-73,
Organism=Drosophila melanogaster, GI24657391, Length=382, Percent_Identity=37.696335078534, Blast_Score=272, Evalue=4e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016156
- InterPro:   IPR013027
- InterPro:   IPR015323
- InterPro:   IPR015904
- InterPro:   IPR006311 [H]

Pfam domain/function: PF09242 FCSD-flav_bind; PF07992 Pyr_redox_2 [H]

EC number: NA

Molecular weight: Translated: 60669; Mature: 60538

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVTPETKWKELDKKIAVTGQISVDDIAGIAAAGYKSIICNRPDGEGGESQPARTALENA
CCCCCCCHHHHHCCEEEEEEECCHHHHHHHHHCCCHHEEEECCCCCCCCCCHHHHHHHHH
AKAAGLQFAYMPVEVGQVSDEKCSAFHQLMQTLPGPVLAFCGSGNRAQALYTRNTGASTA
HHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEECCCCCCC
SASTGTQEKVEDVAETYCEPADKRQTETVAACNWDDVFDIVVVGGGSAGLGVTASLLRRR
CCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCHHHHHHHHHCC
SSLRIAVIEPSEKHYYQPAWTLVGGGAYAIDQTARNTADVMPHGAEWIKVAASKFAPEKN
CCCEEEEECCCCCCCCCCCEEEECCCEEEECHHCCCHHHCCCCCHHHHHHHHHHCCCCCC
LVHLADGRSVGYRQLIVCPGIRLAWEKIEGAQETLGKNGVTSNYLFDLAPYTWSLVQQLK
EEEEECCCCCCCEEEEECCCCHHHHHHHCCHHHHHCCCCCCCCCEEEECHHHHHHHHHHC
GGKALFTQPPMPIKCAGAPQKAMYLSCDYWQRHGVLDKIDVEFDLAGAVLFGVPEFVPPL
CCCEEECCCCCCEEECCCCCCEEEEECHHHHHCCCCEEEEEEEEECCHHHHCCHHHHHHH
MEYVHKYHAGLVFNSNLVKVNGPEKIATFEIKNEAGEVTRVDKPFDMLHITPPQVAPDFL
HHHHHHHHCCEEECCCEEEECCCCEEEEEEECCCCCCEEECCCCCCEEEECCCCCCHHHH
SNSPLANAAGFCEVDPKTLRSTCFSNVFSLGDACSAPNSKTAAAVRKQVVIVAENLLAAK
CCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHEEEEHHHHHHHH
EGRELRAVYDGYGACPLTVENGKVVLAEFGYGGKLLPTFPLNPVIARKLYWWMKVNLFPW
CCCCEEHHHCCCCCCEEEECCCEEEEEECCCCCEECCCCCCCHHHHHHHEEEEEECCCHH
VYWDCLLKGREWLAGSTESK
HHHHHHHCCCHHCCCCCCCC
>Mature Secondary Structure 
SVTPETKWKELDKKIAVTGQISVDDIAGIAAAGYKSIICNRPDGEGGESQPARTALENA
CCCCCCHHHHHCCEEEEEEECCHHHHHHHHHCCCHHEEEECCCCCCCCCCHHHHHHHHH
AKAAGLQFAYMPVEVGQVSDEKCSAFHQLMQTLPGPVLAFCGSGNRAQALYTRNTGASTA
HHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEECCCCCCC
SASTGTQEKVEDVAETYCEPADKRQTETVAACNWDDVFDIVVVGGGSAGLGVTASLLRRR
CCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCHHHHHHHHHCC
SSLRIAVIEPSEKHYYQPAWTLVGGGAYAIDQTARNTADVMPHGAEWIKVAASKFAPEKN
CCCEEEEECCCCCCCCCCCEEEECCCEEEECHHCCCHHHCCCCCHHHHHHHHHHCCCCCC
LVHLADGRSVGYRQLIVCPGIRLAWEKIEGAQETLGKNGVTSNYLFDLAPYTWSLVQQLK
EEEEECCCCCCCEEEEECCCCHHHHHHHCCHHHHHCCCCCCCCCEEEECHHHHHHHHHHC
GGKALFTQPPMPIKCAGAPQKAMYLSCDYWQRHGVLDKIDVEFDLAGAVLFGVPEFVPPL
CCCEEECCCCCCEEECCCCCCEEEEECHHHHHCCCCEEEEEEEEECCHHHHCCHHHHHHH
MEYVHKYHAGLVFNSNLVKVNGPEKIATFEIKNEAGEVTRVDKPFDMLHITPPQVAPDFL
HHHHHHHHCCEEECCCEEEECCCCEEEEEEECCCCCCEEECCCCCCEEEECCCCCCHHHH
SNSPLANAAGFCEVDPKTLRSTCFSNVFSLGDACSAPNSKTAAAVRKQVVIVAENLLAAK
CCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHEEEEHHHHHHHH
EGRELRAVYDGYGACPLTVENGKVVLAEFGYGGKLLPTFPLNPVIARKLYWWMKVNLFPW
CCCCEEHHHCCCCCCEEEECCCEEEEEECCCCCEECCCCCCCHHHHHHHEEEEEECCCHH
VYWDCLLKGREWLAGSTESK
HHHHHHHCCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8390993; 1649169; 7939681 [H]