Click here to switch to the map view.

The map label for this gene is 114332368

Identifier: 114332368

GI number: 114332368

Start: 2525277

End: 2525594

Strand: Reverse

Name: 114332368

Synonym: Neut_2413

Alternate gene names: NA

Gene position: 2525594-2525277 (Counterclockwise)

Preceding gene: 114332369

Following gene: 114332367

Centisome position: 94.91

GC content: 62.26

Gene sequence:

>318_bases
ATGACGCGACAGCGGGGTCGCGCGCCGCGCGGCCAGCGCTGTGTGGCTTCGGTGCCCCACGGCCACTGGAAGAGCACCAC
CTTCATTGCGGGACTGCGTCACGATGCGATCACCGCTCCGTTAGTGCTCGACGGCCTAATGAACGGAGCCGCGTTTCTCG
CCTATATTCAAACCTGTCTGTGCCCAACGCTGCAGCCAGGTGACATTGTGGTGGCCGACAACCTGTCTTGTCACAAGGTT
CCAGGCGTCCGCGCAGCCATTGAAGCGGCAGGTGCCGTGCCGCGCTGCTCTACTTACCGCCATATTCACCAGATCTGA

Upstream 100 bases:

>100_bases
CACAGACGGACGCCGGGCACGAACTGAGTGGGCCCGCGAGTAGCAGCGTTGGGATTGCCGTCACCTGGTCTTCCTGGATG
AGACGGCAACGACCACCAAC

Downstream 100 bases:

>100_bases
ATCCAATCGAGAAAACGTTCTCCAAACTCAAAGCCCTATTACGCAAAGCCGCCAAACGAACCATGGATGCCTTATGGGCA
CAGATCGGCAAAGTGTTGGA

Product: ISRm2011-2 transposase protein

Products: NA

Alternate protein names: Transposase Of Insertion Sequence; Transposase And Inactivated Derivatives-Like Protein; ISSpo6 Transposase OrfB; Insertion Sequence Transposase Protein; Transposase For Insertion Sequence Element; LOW QUALITY PROTEIN Transposase; Transposase IS; Transposase Fragment

Number of amino acids: Translated: 105; Mature: 104

Protein sequence:

>105_residues
MTRQRGRAPRGQRCVASVPHGHWKSTTFIAGLRHDAITAPLVLDGLMNGAAFLAYIQTCLCPTLQPGDIVVADNLSCHKV
PGVRAAIEAAGAVPRCSTYRHIHQI

Sequences:

>Translated_105_residues
MTRQRGRAPRGQRCVASVPHGHWKSTTFIAGLRHDAITAPLVLDGLMNGAAFLAYIQTCLCPTLQPGDIVVADNLSCHKV
PGVRAAIEAAGAVPRCSTYRHIHQI
>Mature_104_residues
TRQRGRAPRGQRCVASVPHGHWKSTTFIAGLRHDAITAPLVLDGLMNGAAFLAYIQTCLCPTLQPGDIVVADNLSCHKVP
GVRAAIEAAGAVPRCSTYRHIHQI

Specific function: Unknown

COG id: COG3335

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11281; Mature: 11150

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRQRGRAPRGQRCVASVPHGHWKSTTFIAGLRHDAITAPLVLDGLMNGAAFLAYIQTCL
CCCCCCCCCCCCCEEECCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
CPTLQPGDIVVADNLSCHKVPGVRAAIEAAGAVPRCSTYRHIHQI
CCCCCCCCEEEECCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHCC
>Mature Secondary Structure 
TRQRGRAPRGQRCVASVPHGHWKSTTFIAGLRHDAITAPLVLDGLMNGAAFLAYIQTCL
CCCCCCCCCCCCEEECCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
CPTLQPGDIVVADNLSCHKVPGVRAAIEAAGAVPRCSTYRHIHQI
CCCCCCCCEEEECCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA