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The map label for this gene is 114332348

Identifier: 114332348

GI number: 114332348

Start: 2504935

End: 2505654

Strand: Reverse

Name: 114332348

Synonym: Neut_2391

Alternate gene names: NA

Gene position: 2505654-2504935 (Counterclockwise)

Preceding gene: 114332349

Following gene: 114332347

Centisome position: 94.16

GC content: 40.28

Gene sequence:

>720_bases
ATGCCTGGTTTTCTACAACAATTCAAGCCATCGCTATGGTCAACAATAGTTACTATATTTGCGATCGCTGTCTTTTTGAA
ACTGGGTTTTTGGCAATTATCCAGAGCAGAGGAAAAAGATAATCGTTTTTCTCTTATAGAATACTATGCCCAGCAACCAC
CCGTTATAATTCCAGAATCACTTGTAAAGCTAAACGATTATTTATATCGTCGAGTTGAAGTTGATGGGTATTTTGATCCG
GAGCGGAGTATATTTCTTGATAACAAAATTCATCAGGGAATTGCGGGCTATCATGTACTTACGCCCCTACGATTAGCGAA
CAGCTCAATAGATATATTGGTCAACCGGGGCTGGGTAGCTGTAGGTAATGACCGGTCAGTTTTGCCCAATATTCGCACCC
CAAAAGGATTGGTTCATATCCTCGGAATCGTAGTATCACCATCAATCAAAACGCTATCGCTTTCAGACGATGATATTAAA
GGTAACGTTTGGCAAAATTTTGACCTGGATACTTATCAAGGCATGACCGGTCTTACCTTGCAACCTTTGTTACTATTGCA
GCAAAATGATGCAACAGACGATGGTTTAATTAGGCAATGGGGAAATCCGGATTCCGGTTCTTCAAGAAATACAGGTTACG
CTCTTCAGTGGTTCTCATTCGCCGCAATGACTTTTATCATCTACATTGTATTAAATGTCAAACGAAAAAGTAACGCGTAG

Upstream 100 bases:

>100_bases
TACTGTAACTCGTAGAAGTAAATAACGGAGAAAAGGTTCGATTCTGTCAGATAAAGAATCGAACCTTAAAAATTTATATG
GTTGTGTACAAGGCTATCTG

Downstream 100 bases:

>100_bases
TCGACTTACTCTAATTATATTAATACTGGTGATATTATCGCCAATCGTAATCTCATCCATCTTGCACCGATGGGATTTCC
GTCCGGACCAAACCGTAAAT

Product: SURF1 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MPGFLQQFKPSLWSTIVTIFAIAVFLKLGFWQLSRAEEKDNRFSLIEYYAQQPPVIIPESLVKLNDYLYRRVEVDGYFDP
ERSIFLDNKIHQGIAGYHVLTPLRLANSSIDILVNRGWVAVGNDRSVLPNIRTPKGLVHILGIVVSPSIKTLSLSDDDIK
GNVWQNFDLDTYQGMTGLTLQPLLLLQQNDATDDGLIRQWGNPDSGSSRNTGYALQWFSFAAMTFIIYIVLNVKRKSNA

Sequences:

>Translated_239_residues
MPGFLQQFKPSLWSTIVTIFAIAVFLKLGFWQLSRAEEKDNRFSLIEYYAQQPPVIIPESLVKLNDYLYRRVEVDGYFDP
ERSIFLDNKIHQGIAGYHVLTPLRLANSSIDILVNRGWVAVGNDRSVLPNIRTPKGLVHILGIVVSPSIKTLSLSDDDIK
GNVWQNFDLDTYQGMTGLTLQPLLLLQQNDATDDGLIRQWGNPDSGSSRNTGYALQWFSFAAMTFIIYIVLNVKRKSNA
>Mature_238_residues
PGFLQQFKPSLWSTIVTIFAIAVFLKLGFWQLSRAEEKDNRFSLIEYYAQQPPVIIPESLVKLNDYLYRRVEVDGYFDPE
RSIFLDNKIHQGIAGYHVLTPLRLANSSIDILVNRGWVAVGNDRSVLPNIRTPKGLVHILGIVVSPSIKTLSLSDDDIKG
NVWQNFDLDTYQGMTGLTLQPLLLLQQNDATDDGLIRQWGNPDSGSSRNTGYALQWFSFAAMTFIIYIVLNVKRKSNA

Specific function: Unknown

COG id: COG3346

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SURF1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002994 [H]

Pfam domain/function: PF02104 SURF1 [H]

EC number: NA

Molecular weight: Translated: 27051; Mature: 26920

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: PS50895 SURF1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGFLQQFKPSLWSTIVTIFAIAVFLKLGFWQLSRAEEKDNRFSLIEYYAQQPPVIIPES
CCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEECHHH
LVKLNDYLYRRVEVDGYFDPERSIFLDNKIHQGIAGYHVLTPLRLANSSIDILVNRGWVA
HHHHHHHHHEEEEECCEECCCCCEEECCHHHCCCCCHHHHHHHHHCCCCEEEEEECCEEE
VGNDRSVLPNIRTPKGLVHILGIVVSPSIKTLSLSDDDIKGNVWQNFDLDTYQGMTGLTL
ECCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHCCCCCCCC
QPLLLLQQNDATDDGLIRQWGNPDSGSSRNTGYALQWFSFAAMTFIIYIVLNVKRKSNA
CEEEEEECCCCCCCCHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCHHCCCC
>Mature Secondary Structure 
PGFLQQFKPSLWSTIVTIFAIAVFLKLGFWQLSRAEEKDNRFSLIEYYAQQPPVIIPES
CCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEECHHH
LVKLNDYLYRRVEVDGYFDPERSIFLDNKIHQGIAGYHVLTPLRLANSSIDILVNRGWVA
HHHHHHHHHEEEEECCEECCCCCEEECCHHHCCCCCHHHHHHHHHCCCCEEEEEECCEEE
VGNDRSVLPNIRTPKGLVHILGIVVSPSIKTLSLSDDDIKGNVWQNFDLDTYQGMTGLTL
ECCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHCCCCCCCC
QPLLLLQQNDATDDGLIRQWGNPDSGSSRNTGYALQWFSFAAMTFIIYIVLNVKRKSNA
CEEEEEECCCCCCCCHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA