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The map label for this gene is cycX1 [H]

Identifier: 114332292

GI number: 114332292

Start: 2458200

End: 2458913

Strand: Reverse

Name: cycX1 [H]

Synonym: Neut_2332

Alternate gene names: 114332292

Gene position: 2458913-2458200 (Counterclockwise)

Preceding gene: 114332293

Following gene: 114332291

Centisome position: 92.4

GC content: 47.2

Gene sequence:

>714_bases
ATGACTAGACTGCAAAAAGGATCAATTGGTACTTTACTGACAGGAGCTCTGCTGGGAATAGCATTGGTGGCTGTGGTTTT
TGGTGGGGAAGCTGCGTTATCGACCGAAGAGTTTTGTACCAGCTGTCATTCCATGTCATACCCACAGAGTGAATTAAAAG
AATCCACCCACTATGGTGCATTGGGGATTAATCCGACTTGTAAAGACTGCCATATTCCACAAGGGATAGAAAATTTCCAC
CTGGCAGTAGCAACTCACGTGGTTGATGGTGCCAGAGAACTTTGGTTGGAGATGGTCAATGACTACTCCACCCTGGAGAA
GTTCAACGAAAGAAGATTGGAAATGGCACATGATGCCCGGATGAACCTCAAGAAATGGGACAGCATTACCTGCCGTACCT
GTCATGTAAAACCAGCTCCTCCGGGAGAAAGCGCTCAGGCGGAACATAAGAAAATGGAAACGGAAGGAGCAACCTGCATA
GACTGTCATCAGAATCTGGTGCATGAAGAAGCGCCGATGACAGATTTGAATGCAAGTCTTGCTGCAGGCAAGCTGGTATT
AAAGTCGGAAGAGGGTGACGATGACGTTGATGACGTTGATGACGTTGATGACGAGGATGAAGAAGTCGAGGTGGAAGTTG
AAGAAACTGAAACAGCTGACGACAGCGACTCCGCTTCCTCCAGCAACCATGATGACGATAGTGATGATGAGTAA

Upstream 100 bases:

>100_bases
AGCATTACAAACTGGATGGCGTATTTGACGGAGAGCCTAAATTCAAGTTCCATGACGAATTCCAGGCCAACGCTAAAACT
GCCAAAAAAGGAAAATAGAG

Downstream 100 bases:

>100_bases
AGTGCAATGTAATTAACACGCTATCTTATTGATGTAAACTAGGACCCGCGGAGATTAAGCTTAAAAACTTCGCGGGTTTT
TTATTGACATAAATGAACTT

Product: NapC/NirT cytochrome c domain-containing protein

Products: H2O; trimethylamine; NAD [C]

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MTRLQKGSIGTLLTGALLGIALVAVVFGGEAALSTEEFCTSCHSMSYPQSELKESTHYGALGINPTCKDCHIPQGIENFH
LAVATHVVDGARELWLEMVNDYSTLEKFNERRLEMAHDARMNLKKWDSITCRTCHVKPAPPGESAQAEHKKMETEGATCI
DCHQNLVHEEAPMTDLNASLAAGKLVLKSEEGDDDVDDVDDVDDEDEEVEVEVEETETADDSDSASSSNHDDDSDDE

Sequences:

>Translated_237_residues
MTRLQKGSIGTLLTGALLGIALVAVVFGGEAALSTEEFCTSCHSMSYPQSELKESTHYGALGINPTCKDCHIPQGIENFH
LAVATHVVDGARELWLEMVNDYSTLEKFNERRLEMAHDARMNLKKWDSITCRTCHVKPAPPGESAQAEHKKMETEGATCI
DCHQNLVHEEAPMTDLNASLAAGKLVLKSEEGDDDVDDVDDVDDEDEEVEVEVEETETADDSDSASSSNHDDDSDDE
>Mature_236_residues
TRLQKGSIGTLLTGALLGIALVAVVFGGEAALSTEEFCTSCHSMSYPQSELKESTHYGALGINPTCKDCHIPQGIENFHL
AVATHVVDGARELWLEMVNDYSTLEKFNERRLEMAHDARMNLKKWDSITCRTCHVKPAPPGESAQAEHKKMETEGATCID
CHQNLVHEEAPMTDLNASLAAGKLVLKSEEGDDDVDDVDDVDDEDEEVEVEVEETETADDSDSASSSNHDDDSDDE

Specific function: Part Of The Anaerobic Respiratory Chain Of Trimethylamine-N-Oxide Reductase Tora. Acts By Transferring Electrons From The Membranous Menaquinones To Tora. This Transfer Probably Involves An Electron Transfer Pathway From Menaquinones To The N-Terminal Dom

COG id: COG3005

COG function: function code C; Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787230, Length=172, Percent_Identity=30.8139534883721, Blast_Score=88, Evalue=5e-19,
Organism=Escherichia coli, GI1788181, Length=137, Percent_Identity=37.2262773722628, Blast_Score=87, Evalue=7e-19,
Organism=Escherichia coli, GI1788530, Length=185, Percent_Identity=29.7297297297297, Blast_Score=80, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011031
- InterPro:   IPR005126 [H]

Pfam domain/function: PF03264 Cytochrom_NNT [H]

EC number: NA

Molecular weight: Translated: 25912; Mature: 25780

Theoretical pI: Translated: 4.06; Mature: 4.06

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRLQKGSIGTLLTGALLGIALVAVVFGGEAALSTEEFCTSCHSMSYPQSELKESTHYGA
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHCCCCCHHHHHHHHCCCC
LGINPTCKDCHIPQGIENFHLAVATHVVDGARELWLEMVNDYSTLEKFNERRLEMAHDAR
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MNLKKWDSITCRTCHVKPAPPGESAQAEHKKMETEGATCIDCHQNLVHEEAPMTDLNASL
CCHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHH
AAGKLVLKSEEGDDDVDDVDDVDDEDEEVEVEVEETETADDSDSASSSNHDDDSDDE
HHCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TRLQKGSIGTLLTGALLGIALVAVVFGGEAALSTEEFCTSCHSMSYPQSELKESTHYGA
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHCCCCCHHHHHHHHCCCC
LGINPTCKDCHIPQGIENFHLAVATHVVDGARELWLEMVNDYSTLEKFNERRLEMAHDAR
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MNLKKWDSITCRTCHVKPAPPGESAQAEHKKMETEGATCIDCHQNLVHEEAPMTDLNASL
CCHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHH
AAGKLVLKSEEGDDDVDDVDDVDDEDEEVEVEVEETETADDSDSASSSNHDDDSDDE
HHCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: trimethylamine-N-oxide; NADH [C]

Specific reaction: trimethylamine-N-oxide + NADH = H2O + trimethylamine + NAD [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8195067; 12700255 [H]