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The map label for this gene is trbL [H]

Identifier: 114332218

GI number: 114332218

Start: 2383773

End: 2385200

Strand: Direct

Name: trbL [H]

Synonym: Neut_2258

Alternate gene names: 114332218

Gene position: 2383773-2385200 (Clockwise)

Preceding gene: 146345322

Following gene: 114332219

Centisome position: 89.58

GC content: 55.88

Gene sequence:

>1428_bases
ATGAGAAAGAAAATTGCTCTAGGTGGCTTGATGATGGTCGCCACAATGGTGCTGGCTGAACCTGCAATGGCGCAGGAGCT
AAGTAGCAGCGGTGTTATGAATGATGTGCTCAAGCGTTTTCATGATGCTGCCGCAACATGGGGGCCAGCTATTGAGTCCG
CTGCATCGCGTTTGTTCTGGACGCTGGTTGTGATTTCGATGGTCTGGACATTCGGCATGATGGCTTTGCGCAAGGCCGAC
ATTGGCGAGTTCTTCGCGGAGTTCGTTCGCTTCACGATCTTCACCGGCTTTTTCTGGTGGTTGCTGACGAATGCGAACCA
GGGCATGAATATCGCCGGTACGATTGTTCAGTCATTGCAAACTCTGGGCGCGCAGGCGGGGGGACTTTCCAATAGCAATC
TTGGGCCCTCCAGCATCCTTGATCTTGGTTTCGAGTTATACAACCGCACAGTACAGGCCACCTCGGAGCTGGGATGGCGG
CAGATGGCAACTGCTCTGGTCATGGAGCTAATGGCCCTGGCTGTTTTGTTTGTCCTGGCGTTGATTGCGGTCAACCTGTT
GCTGTTGCTCGCATCAGCCTGGATTCTGTTGTATGCCGGTGTGTTCTTCCTTGGCTTTGGTGGAAGTCGTTGGACTTCCG
ACATGGCGATCAATTACTACAAGACCGTGCTGGGCCTGGCCGCACAGCTTATGGCAATGGTGCTTCTGGTTGCGATTGGC
AAAGAGTTCATCAATCACTACTACACGCAAATCAGCGAGAACATGGCATCCCAGGAACTGGCCGTGATGTTGGTTATATC
GGTCATCTTGCTTTTCTTGGTCAACAAAGTTCCGCCGATGATTTCTGGTCTTGTGTCTGGTGGTGGTATTGGCGCAGCCG
GTGGAATTGGAAACTTCGGTGCGGGTGCGGCAGTTGGGGCGGCGGTGACGGCGGCCAGTATGGCAACTGGCGGCGCTGCC
CTGGCAGGTAAAGCGGTTATGGGTGCCGCAGCCGGTGCAGCCGGAGGTGCAAGTGCACTCCAAGCGGCTTTTCAGAAAGC
ATCAGCGAGTATGGAAACCGGCGGTGACATGTCCAGCATGGGGTCAGTTGTCAGCAGTGGCGGAAACGGTGGTGGTGAAG
CGGGTACTGCTGGCAGTAGCCCATTCGCCCAAGCGGCTGGCTTTGGTGACAGCGGCAGTAGCTCAAGCGGTGGCGGCTTT
GCCAAGGCCGCGAAGCTGGCCACAGGCACGGCCTCCGAGTTAGCCAAGGGTGTCGGCTCTCAAGTGAAGCAGGGATTCCA
GGAGCGAGTGAGCGAAACCACAGGCGGAAAACTGGCTGCTTCGATACGCGAAAGCATGGAGCCGAAAGAAGCAAGCCAAT
CTGGCCAGTTCGAGGGCAATAGCTTGGGCGCCGATTCTGGCCCAGATAGTAACGAAGTCAGGAGTTAG

Upstream 100 bases:

>100_bases
GAGGCCTTTACCGAGGAATGCAGAGCATTCCAGAAGGCCAAGCAGATGCGTCAGTGGGAGTTCAAGCCCAGCCCTAAAGA
TGATTATTGAGGTGGTCGCC

Downstream 100 bases:

>100_bases
CACGATGACGACATCAACATACATGGCCGCATTGGCGGCCCTGGATGAAGCGCCAAGGGAAGAAGTCAGCCAGGTATTTA
TTTCGCCGCTGGGTGATCAA

Product: TrbL/VirB6 plasmid conjugal transfer protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 475; Mature: 475

Protein sequence:

>475_residues
MRKKIALGGLMMVATMVLAEPAMAQELSSSGVMNDVLKRFHDAAATWGPAIESAASRLFWTLVVISMVWTFGMMALRKAD
IGEFFAEFVRFTIFTGFFWWLLTNANQGMNIAGTIVQSLQTLGAQAGGLSNSNLGPSSILDLGFELYNRTVQATSELGWR
QMATALVMELMALAVLFVLALIAVNLLLLLASAWILLYAGVFFLGFGGSRWTSDMAINYYKTVLGLAAQLMAMVLLVAIG
KEFINHYYTQISENMASQELAVMLVISVILLFLVNKVPPMISGLVSGGGIGAAGGIGNFGAGAAVGAAVTAASMATGGAA
LAGKAVMGAAAGAAGGASALQAAFQKASASMETGGDMSSMGSVVSSGGNGGGEAGTAGSSPFAQAAGFGDSGSSSSGGGF
AKAAKLATGTASELAKGVGSQVKQGFQERVSETTGGKLAASIRESMEPKEASQSGQFEGNSLGADSGPDSNEVRS

Sequences:

>Translated_475_residues
MRKKIALGGLMMVATMVLAEPAMAQELSSSGVMNDVLKRFHDAAATWGPAIESAASRLFWTLVVISMVWTFGMMALRKAD
IGEFFAEFVRFTIFTGFFWWLLTNANQGMNIAGTIVQSLQTLGAQAGGLSNSNLGPSSILDLGFELYNRTVQATSELGWR
QMATALVMELMALAVLFVLALIAVNLLLLLASAWILLYAGVFFLGFGGSRWTSDMAINYYKTVLGLAAQLMAMVLLVAIG
KEFINHYYTQISENMASQELAVMLVISVILLFLVNKVPPMISGLVSGGGIGAAGGIGNFGAGAAVGAAVTAASMATGGAA
LAGKAVMGAAAGAAGGASALQAAFQKASASMETGGDMSSMGSVVSSGGNGGGEAGTAGSSPFAQAAGFGDSGSSSSGGGF
AKAAKLATGTASELAKGVGSQVKQGFQERVSETTGGKLAASIRESMEPKEASQSGQFEGNSLGADSGPDSNEVRS
>Mature_475_residues
MRKKIALGGLMMVATMVLAEPAMAQELSSSGVMNDVLKRFHDAAATWGPAIESAASRLFWTLVVISMVWTFGMMALRKAD
IGEFFAEFVRFTIFTGFFWWLLTNANQGMNIAGTIVQSLQTLGAQAGGLSNSNLGPSSILDLGFELYNRTVQATSELGWR
QMATALVMELMALAVLFVLALIAVNLLLLLASAWILLYAGVFFLGFGGSRWTSDMAINYYKTVLGLAAQLMAMVLLVAIG
KEFINHYYTQISENMASQELAVMLVISVILLFLVNKVPPMISGLVSGGGIGAAGGIGNFGAGAAVGAAVTAASMATGGAA
LAGKAVMGAAAGAAGGASALQAAFQKASASMETGGDMSSMGSVVSSGGNGGGEAGTAGSSPFAQAAGFGDSGSSSSGGGF
AKAAKLATGTASELAKGVGSQVKQGFQERVSETTGGKLAASIRESMEPKEASQSGQFEGNSLGADSGPDSNEVRS

Specific function: Unknown

COG id: COG3846

COG function: function code U; Type IV secretory pathway, TrbL components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbL/virB6 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014150
- InterPro:   IPR007688 [H]

Pfam domain/function: PF04610 TrbL [H]

EC number: NA

Molecular weight: Translated: 48407; Mature: 48407

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKKIALGGLMMVATMVLAEPAMAQELSSSGVMNDVLKRFHDAAATWGPAIESAASRLFW
CCCCHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
TLVVISMVWTFGMMALRKADIGEFFAEFVRFTIFTGFFWWLLTNANQGMNIAGTIVQSLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
TLGAQAGGLSNSNLGPSSILDLGFELYNRTVQATSELGWRQMATALVMELMALAVLFVLA
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIAVNLLLLLASAWILLYAGVFFLGFGGSRWTSDMAINYYKTVLGLAAQLMAMVLLVAIG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEFINHYYTQISENMASQELAVMLVISVILLFLVNKVPPMISGLVSGGGIGAAGGIGNFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCC
AGAAVGAAVTAASMATGGAALAGKAVMGAAAGAAGGASALQAAFQKASASMETGGDMSSM
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHH
GSVVSSGGNGGGEAGTAGSSPFAQAAGFGDSGSSSSGGGFAKAAKLATGTASELAKGVGS
HHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHH
QVKQGFQERVSETTGGKLAASIRESMEPKEASQSGQFEGNSLGADSGPDSNEVRS
HHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRKKIALGGLMMVATMVLAEPAMAQELSSSGVMNDVLKRFHDAAATWGPAIESAASRLFW
CCCCHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
TLVVISMVWTFGMMALRKADIGEFFAEFVRFTIFTGFFWWLLTNANQGMNIAGTIVQSLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
TLGAQAGGLSNSNLGPSSILDLGFELYNRTVQATSELGWRQMATALVMELMALAVLFVLA
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIAVNLLLLLASAWILLYAGVFFLGFGGSRWTSDMAINYYKTVLGLAAQLMAMVLLVAIG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEFINHYYTQISENMASQELAVMLVISVILLFLVNKVPPMISGLVSGGGIGAAGGIGNFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCC
AGAAVGAAVTAASMATGGAALAGKAVMGAAAGAAGGASALQAAFQKASASMETGGDMSSM
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHH
GSVVSSGGNGGGEAGTAGSSPFAQAAGFGDSGSSSSGGGFAKAAKLATGTASELAKGVGS
HHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHH
QVKQGFQERVSETTGGKLAASIRESMEPKEASQSGQFEGNSLGADSGPDSNEVRS
HHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]