Click here to switch to the map view.

The map label for this gene is 114332213

Identifier: 114332213

GI number: 114332213

Start: 2379451

End: 2379672

Strand: Direct

Name: 114332213

Synonym: Neut_2253

Alternate gene names: NA

Gene position: 2379451-2379672 (Clockwise)

Preceding gene: 114332212

Following gene: 114332214

Centisome position: 89.42

GC content: 50.0

Gene sequence:

>222_bases
ATGCAAAATATAAAGACCCTCATCAACAGGAAGAAGCTCCTGGAGATGATCCCGCTTTCGACACGAACAATTTATAACCT
GGAGCAGCGAGGGGATTTTCCACGCCGTATCGCGTTAACCAGTAGAAATGTCGCCTGGGATTTGTCAGAGGTCGAAGAGT
GGATTGAGGCACGTAAATCATCGGGTGATCAAGCTGCGCGACCTGGCCCTATAGAGGGCTAG

Upstream 100 bases:

>100_bases
AAATAAGGCCGCCATTGGCATCGGGCAGGTCAATTACCGATTAGCTGCTTCGCGCAGCTACTCGATGAATAGCAACTATT
CATTTGAGAGGTATTGACCC

Downstream 100 bases:

>100_bases
TTATATGGCTCTTGATCTTATGGCGGCTTTCACGGAATTGCCGCCACCCATTGATTATGTTCTGCCTAATATGGTTGCTG
GCACTGTTGGTGCTCTTGTG

Product: phage transcriptional regulator, AlpA

Products: NA

Alternate protein names: Phage Transcriptional Regulator; Prophage CP4-57 Regulatory; Phage Transcriptional Regulator Alpa; AlpA Family Transcriptional Regulator; Prophage Regulatory Protein; Regulatory Protein Alpa Family; Prophage Cp4-57 Regulatory

Number of amino acids: Translated: 73; Mature: 73

Protein sequence:

>73_residues
MQNIKTLINRKKLLEMIPLSTRTIYNLEQRGDFPRRIALTSRNVAWDLSEVEEWIEARKSSGDQAARPGPIEG

Sequences:

>Translated_73_residues
MQNIKTLINRKKLLEMIPLSTRTIYNLEQRGDFPRRIALTSRNVAWDLSEVEEWIEARKSSGDQAARPGPIEG
>Mature_73_residues
MQNIKTLINRKKLLEMIPLSTRTIYNLEQRGDFPRRIALTSRNVAWDLSEVEEWIEARKSSGDQAARPGPIEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8410; Mature: 8410

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNIKTLINRKKLLEMIPLSTRTIYNLEQRGDFPRRIALTSRNVAWDLSEVEEWIEARKS
CCHHHHHHHHHHHHHHCCCCCHHHCCHHHCCCCCCEEEECCCCCEECHHHHHHHHHHHHC
SGDQAARPGPIEG
CCCCCCCCCCCCC
>Mature Secondary Structure
MQNIKTLINRKKLLEMIPLSTRTIYNLEQRGDFPRRIALTSRNVAWDLSEVEEWIEARKS
CCHHHHHHHHHHHHHHCCCCCHHHCCHHHCCCCCCEEEECCCCCEECHHHHHHHHHHHHC
SGDQAARPGPIEG
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA